$nid, 'group_id' => $group_id, 'chado_table' => $table, 'chado_field' => $field, 'record_id' => $record_id, 'field_id' => $field_id, 'value' => $value ); // Check to see if already exists $exists = db_fetch_object(db_query( "SELECT constant_id FROM {tripal_bulk_loader_constants} WHERE nid=%d AND record_id=%d AND field_id=%d AND group_id=%d", $record['nid'], $record['record_id'], $record['field_id'], $record['group_id'] )); if ($exists->constant_id) { $record['constant_id'] = $exists->constant_id; $status = drupal_write_record('tripal_bulk_loader_constants', $record, 'constant_id'); if ($status) { return $record; } else { return FALSE; } } else { $status = drupal_write_record('tripal_bulk_loader_constants', $record); if ($status) { return $record; } else { return FALSE; } } } /** * Check if a bulk loading job has exposed constants * * @ingroup tripal_bulk_loader */ function tripal_bulk_loader_has_exposed_fields($node) { // exposed fields isn't set if (!isset($node->exposed_fields)) { return FALSE; } // exposed fields has at least one element if (sizeof($node->exposed_fields) == 1) { // need to check if single element is an empty array $element = reset($node->exposed_fields); if ($element) { return TRUE; } else { return FALSE; } } elseif (sizeof($node->exposed_fields) > 1) { return TRUE; } else { return FALSE; } return FALSE; } /////////////////////////////////////////////////////////// // Set Constants Form (on Bulk Loader Node) /////////////////////////////////////////////////////////// /** * Set constants (exposed fields in template) * * @param $form_state * The current state of the form * @param $node * The node to set constants for * * @return * A form array to be rendered by drupal_get_form() * * @ingroup tripal_bulk_loader */ function tripal_bulk_loader_set_constants_form($form_state, $node) { $form = array(); $form['nid'] = array( '#type' => 'hidden', '#value' => $node->nid ); if (!tripal_bulk_loader_has_exposed_fields($node)) { return $form; } $form['exposed_array'] = array( '#type' => 'hidden', '#value' => serialize($node->exposed_fields), ); $form['exposed_fields'] = array( '#type' => 'fieldset', '#title' => t('Constant Values'), '#collapsible' => TRUE, '#collapsed' => ($node->template_id) ? FALSE : TRUE, '#prefix' => '
', '#suffix' => '
', ); // Display table of already added constant sets with the ability to re-arrange and delete $first_constant = reset($node->constants); if (sizeof($node->constants) > 0 AND !empty($first_constant)) { $form['exposed_fields']['explanation-1'] = array( '#type' => 'item', '#value' => t('You have already added constants to this bulk loading job. Each ' .'row in the following table represents a set of constants. Each set will be used ' .'to load your data file with the specified template resulting in the each record ' .'in the template to be loaded x number of times where there are x sets of ' .'constants (rows in the following table).') ); $form['exposed_fields']['existing'] = array( '#tree' => TRUE, ); foreach ($node->constants as $set) { foreach ($set as $record) { foreach ($record as $field) { $index = $field['record_id'] . '-' . $field['field_id']; $group = $field['group_id']; $form['exposed_fields']['existing'][$group][$index] = array( '#type' => 'markup', '#value' => filter_xss($field['value']), ); } } $form['exposed_fields']['existing'][$group]['delete'] = array( '#type' => 'markup', '#value' => filter_xss(l(t('Edit'), 'node/' . $node->nid . '/constants/' . $group . '/edit') . ' | ' . l(t('Delete'), 'node/' . $node->nid . '/constants/' . $group . '/delete')), ); } } $form['exposed_fields']['new'] = array( '#type' => 'fieldset', '#title' => t('New set of Constants'), ); $form['exposed_fields']['new']['explanation-2'] = array( '#type' => 'item', '#value' => t('The following fields are constants in the selected template that you need to set values for.') ); // Add textifelds for exposed fields of the current template $exposed_fields = FALSE; $indexes = array(); if (tripal_bulk_loader_has_exposed_fields($node)) { foreach ($node->exposed_fields as $exposed_index) { $record_id = $exposed_index['record_id']; $field_id = $exposed_index['field_id']; $field = $node->template->template_array[$record_id]['fields'][$field_id]; if ($field['exposed']) { $exposed_fields = TRUE; $indexes[$record_id][] = $field_id; switch ($field['type']) { case 'table field': $form['exposed_fields']['new'][$record_id . '-' . $field_id] = array( '#type' => 'textfield', '#title' => t('%title', array('%title' => $field['title'])), '#description' => t('%exposed_description', array('%exposed_description' => $field['exposed_description'])), '#default_value' => (isset($node->constants[$record_id][$field_id]['value'])) ? $node->constants[$record_id][$field_id]['value'] : $field['constant value'], ); break; case 'constant': $form['exposed_fields']['new'][$record_id . '-' . $field_id] = array( '#type' => 'textfield', '#title' => t('%title', array('%title' => $field['title']) ), '#description' => t('Enter the case-sensitive value of this constant for your data file'), '#default_value' => (isset($node->constants[$record_id][$field_id]['value'])) ? $node->constants[$record_id][$field_id]['value'] : $field['constant value'], ); break; } $form['exposed_fields']['new'][$record_id . '-' . $field_id . '-table'] = array( '#type' => 'hidden', '#value' => $node->template->template_array[$record_id]['table'], ); $form['exposed_fields']['new'][$record_id . '-' . $field_id . '-field'] = array( '#type' => 'hidden', '#value' => $field['field'], ); $form['exposed_fields']['new'][$record_id . '-' . $field_id . '-type'] = array( '#type' => 'hidden', '#value' => $field['type'], ); } } } $form['template'] = array( '#type' => 'hidden', '#value' => serialize($node->template->template_array) ); $form['exposed_fields']['new']['indexes'] = array( '#type' => 'hidden', '#value' => serialize($indexes), ); if (!$exposed_fields) { $form['exposed_fields']['new']['explanation'] = array( '#type' => 'item', '#value' => t('There are no exposed fields for this template.') ); } $form['exposed_fields']['new']['submit-2'] = array( '#type' => 'submit', '#name' => 'add_constant', '#value' => t('Add Constant Set') ); return $form; } /** * Validate that the values entered exist in the database * if indicated in hte template array * * @ingroup tripal_bulk_loader */ function tripal_bulk_loader_set_constants_form_validate($form, $form_state) { $template = unserialize($form_state['values']['template']); $indexes = unserialize($form_state['values']['indexes']); $op = $form_state['values'][ $form_state['clicked_button']['#name'] ]; if (strcmp('Add Constant Set', $op) == 0) { foreach ($indexes as $record_id => $array) { foreach ($array as $field_id) { if ($template[$record_id]['fields'][$field_id]['exposed_validate']) { $result = db_fetch_object(chado_query( "SELECT 1 as valid FROM {%s} WHERE %s='%s'", $template[$record_id]['table'], $template[$record_id]['fields'][$field_id]['field'], $form_state['values'][$record_id . '-' . $field_id] )); if (!$result->valid) { $msg = 'A ' . $form['exposed_fields']['new'][$record_id . '-' . $field_id]['#title'] . ' of "' . $form['exposed_fields']['new'][$record_id . '-' . $field_id]['#value'] . '" must already exist!'; form_set_error($record_id . '-' . $field_id, $msg); } else { drupal_set_message( t( 'Confirmed a %title of "%value" already exists.', array( '%title' => $form['exposed_fields']['new'][$record_id . '-' . $field_id]['#title'], '%value' => $form['exposed_fields']['new'][$record_id . '-' . $field_id]['#value'] ) ) ); } } } } } } /** * Insert/update the constants associated with this node * * @ingroup tripal_bulk_loader */ function tripal_bulk_loader_set_constants_form_submit($form, $form_state) { // Insert/Update constants $template = unserialize($form_state['values']['template']); $indexes = unserialize($form_state['values']['indexes']); $op = $form_state['values'][ $form_state['clicked_button']['#name'] ]; if (strcmp('Add Constant Set', $op) == 0) { $max_group = db_fetch_object(db_query("SELECT max(group_id) as value FROM {tripal_bulk_loader_constants} WHERE nid=%d", $form_state['values']['nid'])); foreach ($indexes as $record_id => $array) { foreach ($array as $field_id) { tripal_bulk_loader_update_constant( $form_state['values']['nid'], $max_group->value+1, $form_state['values'][$record_id . '-' . $field_id . '-table'], $form_state['values'][$record_id . '-' . $field_id . '-field'], $record_id, $field_id, $form_state['values'][$record_id . '-' . $field_id] ); } } } } /** * Themes the bulk loading job set constants form * * @ingroup tripal_bulk_loader */ function theme_tripal_bulk_loader_set_constants_form($form) { $output = ''; $exposed_fields = unserialize($form['exposed_array']['#value']); // need to put in the context of a node so we can use the has_exposed_fields function if ($exposed_fields) { $node->exposed_fields = $exposed_fields; } else { $node->exposed_fields = array(); } // Add draggable table for constant sets if (tripal_bulk_loader_has_exposed_fields($node)) { $i=1; foreach (element_children($form['exposed_fields']['existing']) as $key) { $element = &$form['exposed_fields']['existing'][$key]; $element['group']['#attributes']['class'] = 'weight-group'; $row = array(); foreach ($exposed_fields as $exposed) { if ($i==1) { $header[] = $exposed['title']; } $k = $exposed['record_id'] . '-' . $exposed['field_id']; $row[] = drupal_render($element[$k]); } $row[] = drupal_render($element['delete']); $row[] = drupal_render($element['group']) . drupal_render($element['id']); if (!empty($row[0])) { $rows[] = array('data' => $row, 'class' => 'draggable'); } $i++; } //drupal_add_tabledrag('mytable', 'order', 'sibling', 'weight-group'); // @coder-ignore: no user input thus don't need to filter $form['exposed_fields']['existing'] = array( '#type' => 'markup', '#value' => theme('table', $header, $rows, array('id' => 'mytable')) . '
', ); } $output .= drupal_render($form); return $output; } /////////////////////////////////////////////////////////// // Set Constants Form (on Bulk Loader Node) /////////////////////////////////////////////////////////// /** * Edit a constant set (exposed fields in template) * * @param $form_state * The current state of the form * @param $node * The node to set constants for * @param $group_id * The constant set to edit * * @return * A form array to be rendered by drupal_get_form() * * @ingroup tripal_bulk_loader */ function tripal_bulk_loader_edit_constant_set_form($form_state, $node, $group_id) { $form = array(); $form['#redirect'] = 'node/' . $node->nid; $form['nid'] = array( '#type' => 'hidden', '#value' => $node->nid, ); $form['group_id'] = array( '#type' => 'hidden', '#value' => $group_id, ); $form['explanation'] = array( '#type' => 'item', '#value' => t('The following fields are constants in the selected template that you need to set values for.') ); // Add textifelds for exposed fields of the current template $exposed_fields = FALSE; $indexes = array(); if (tripal_bulk_loader_has_exposed_fields($node)) { foreach ($node->exposed_fields as $exposed_index) { $record_id = $exposed_index['record_id']; $record = $node->template->template_array[$record_id]; $field_id = $exposed_index['field_id']; $field = $node->template->template_array[$record_id]['fields'][$field_id]; if ($field['exposed']) { $exposed_fields = TRUE; $indexes[$record_id][] = $field_id; switch ($field['type']) { case 'table field': $form[$record_id . '-' . $field_id] = array( '#type' => 'textfield', '#title' => t('%title', array('%title' => $field['title'])), '#description' => t('%exposed_description', array('%exposed_description' => $field['exposed_description'])), '#default_value' => (isset($node->constants[$group_id][$record_id][$field_id]['value'])) ? $node->constants[$group_id][$record_id][$field_id]['value'] : $field['constant value'], ); break; case 'constant': $form[$record_id . '-' . $field_id] = array( '#type' => 'textfield', '#title' => t('%title', array('%title' => $field['title'])), '#description' => t('Enter the case-sensitive value of this constant for your data file'), '#default_value' => (isset($node->constants[$group_id][$record_id][$field_id]['value'])) ? $node->constants[$group_id][$record_id][$field_id]['value'] : $field['constant value'], ); break; } $form[$record_id . '-' . $field_id . '-table'] = array( '#type' => 'hidden', '#value' => $record['table'], ); $form[$record_id . '-' . $field_id . '-field'] = array( '#type' => 'hidden', '#value' => $field['field'], ); $form[$record_id . '-' . $field_id . '-type'] = array( '#type' => 'hidden', '#value' => $field['type'], ); } } } $form['template'] = array( '#type' => 'hidden', '#value' => serialize($node->template->template_array) ); $form['indexes'] = array( '#type' => 'hidden', '#value' => serialize($indexes), ); $form['save'] = array( '#type' => 'submit', '#value' => 'Save', ); $form['cancel'] = array( '#type' => 'submit', '#value' => 'Cancel', ); return $form; } /** * Edit constants in the current constant set * * @ingroup tripal_bulk_loader */ function tripal_bulk_loader_edit_constant_set_form_submit($form, $form_state) { // Update constants $template = unserialize($form_state['values']['template']); $indexes = unserialize($form_state['values']['indexes']); $op = $form_state['values'][ $form_state['clicked_button']['#name'] ]; if (strcmp('Save', $op) == 0) { foreach ($indexes as $record_id => $array) { foreach ($array as $field_id) { tripal_bulk_loader_update_constant( $form_state['values']['nid'], $form_state['values']['group_id'], $form_state['values'][$record_id . '-' . $field_id . '-table'], $form_state['values'][$record_id . '-' . $field_id . '-field'], $record_id, $field_id, $form_state['values'][$record_id . '-' . $field_id] ); } } drupal_set_message(t('The constant set was successfully updated.')); } } /** * Delete a constant set (exposed fields in template) * * @param $form_state * The current state of the form * @param $node * The node to set constants for * @param $group_id * The constant set to delete * * @return * A form array to be rendered by drupal_get_form() * * @ingroup tripal_bulk_loader */ function tripal_bulk_loader_delete_constant_set_form($form_state, $node, $group_id) { $form = array(); $form['#redirect'] = 'node/' . $node->nid; $form['nid'] = array( '#type' => 'value', '#value' => $node->nid, ); $form['group_id'] = array( '#type' => 'hidden', '#value' => $group_id, ); return confirm_form($form, t('Are you sure you want to delete this constant set?'), 'node/' . $node->nid, t('This action cannot be undone.'), t('Delete'), t('Cancel') ); } /** * Delete the current constant set * * @ingroup tripal_bulk_loader */ function tripal_bulk_loader_delete_constant_set_form_submit($form, $form_state) { $group_id = $form_state['values']['group_id']; $nid = $form_state['values']['nid']; if ($nid && $form_state['values']['confirm']) { db_query("DELETE FROM {tripal_bulk_loader_constants} WHERE nid=%d AND group_id=%d", $nid, $group_id); drupal_set_message(t('Constant set successfully deleted.')); } }