3rdparty.rst 1.4 KB

12345678910111213141516171819202122232425262728
  1. Third-party Integration
  2. =======================
  3. The following modules provide integration with external third-party tools. For example, they may allow you to easily embed the tool in Drupal/Tripal pages and/or expose data from the tool on your Tripal site.
  4. Tripal Blast
  5. ------------
  6. This module provides a basic interface to allow your users to utilize your server's NCBI BLAST+. There is a simple interface allowing users to paste or upload a query sequence and then select from available databases and a tabular results listing with alignment information and multiple download formats (HTML, TSV, GFF3, XML) available.
  7. `Documentation <https://github.com/tripal/tripal_blast/blob/7.x-1.x/README.md>`__
  8. `Repository <https://github.com/tripal/tripal_blast>`__
  9. Tripal Galaxy
  10. -------------
  11. This module is for integration of Tripal and the Galaxy Project. It facillitates the creation of forms on your Tripal site that submit jobs to a galaxy instance.
  12. `Documentation <https://github.com/tripal/tripal_galaxy/blob/7.x-1.x/README.md>`__
  13. `Repository <https://github.com/tripal/tripal_galaxy>`__
  14. Tripal JBrowse
  15. --------------
  16. This module provides integration between Tripal sites and pre-existing GMOD JBrowse instances. It allows you to create pages on your Tripal site with an embedded JBrowse instance by filling out a simple form.
  17. `Documentation <https://github.com/tripal/tripal_jbrowse/blob/7.x-2.1.x/README.md>`__
  18. `Repository <https://github.com/tripal/tripal_jbrowse>`__