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- <?php
-
- /**
- * @file
- * This file defines the data array for a given chado table. This array
- * is merged into a larger array containing definitions of all tables associated
- * with this module in:
- * @see tripal_project.views.inc --in tripal_project_views_data()
- *
- * Documentation on views integration can be found at
- * http://views2.logrus.com/doc/html/index.html.
- */
- /*************************************************************************
- * Purpose: this function returns the portion of the data array
- * which describes the project table, it's fields and any joins between it and other tables
- * @see tripal_project_views_data() --in tripal_project.views.inc
- *
- * Table: project
- * @code
- * project-Copy/Paste Table SQL code here-project
- * @endcode
- */
- function retrieve_project_views_data() {
- global $db_url;
- $data = array();
- // if the chado database is not local to the drupal database
- // then we need to set the database name. This should always
- // be 'chado'.
- if(is_array($db_url) and array_key_exists('chado',$db_url)){
- $database = 'chado';
- }
-
- //Basic table definition-----------------------------------
- $data['project']['table']['group'] = t('Chado Project');
-
- $data['project']['table']['base'] = array(
- 'field' => 'project_id',
- 'title' => t('Chado Project'),
- 'help' => t('Another way of grouping chado content together.'),
- );
- if($database){
- $data['project']['table']['database'] = $database;
- }
-
- //Relationship Definitions---------------------------------
- //Join: YYY => project
- // Notice that this relationship tells the primary table to show it's fields to the
- // table referencing it by a foreign key and thus the relationship is from
- // primary table to table referenceing it (ie: cvterm => feature)
- /**
- $data['project']['table']['join']['YYY'] = array(
- 'left_field' => 'foreign key in YYY table',
- 'field' => 'primary key in project table',
- );
- */
-
- //Join: project => XY => YYY
- // This relationship should be described in both directions
- // in the appropriate files (ie: for feature => library
- // describe in both feature.views.inc and library.views.inc)
- /**
- $data['project']['table']['join']['XY'] = array(
- 'left_field' => 'matching project key in the XY table',
- 'field' => 'primary key in project table',
- );
- $data['project']['table']['join']['YYY'] = array(
- 'left_table' => 'XY',
- 'left_field' => 'matching project key in the XY table',
- 'field' => 'primary key in project table',
- );
- $data['XY']['table']['join']['YYY'] = array(
- 'left_field' => 'primary key in YYY table',
- 'field' => 'matching YYY key in the XY table',
- );
- */
-
- //Table Field Definitions----------------------------------
-
- //Field: project_id (primary key)
- $data['project']['project_id'] = array(
- 'title' => t('Project Primary Key'),
- 'help' => t('A unique index for every project.'),
- 'field' => array(
- 'handler' => 'views_handler_field_numeric',
- 'click sortable' => TRUE,
- ),
- 'sort' => array(
- 'handler' => 'views_handler_sort',
- ),
- 'filter' => array(
- 'handler' => 'views_handler_filter_numeric',
- ),
- );
- // Calculated Field: Node ID
- // use custom field handler to query drupal for the node ID
- // this is only needed if chado is in a separate database from drupal
- if ($database){
- } else {
- // Add relationship between chado_project and project
- $data['project']['project_nid'] = array(
- 'group' => 'project',
- 'title' => 'project Node',
- 'help' => 'Links Chado project Fields/Data to the Nodes in the current View.',
- 'real field' => 'project_id',
- 'relationship' => array(
- 'handler' => 'views_handler_relationship',
- 'title' => t('project => Chado'),
- 'label' => t('project => Chado'),
- 'real field' => 'project_id',
- 'base' => 'chado_project',
- 'base field' => 'project_id'
- ),
- );
- }
- //Field: name (varchar -255)
- $data['project']['name'] = array(
- 'title' => t('Name'),
- 'help' => t('The name of the project.'),
- 'field' => array(
- 'handler' => 'views_handler_field',
- 'click sortable' => TRUE,
- ),
- 'sort' => array(
- 'handler' => 'views_handler_sort',
- ),
- 'filter' => array(
- 'handler' => 'views_handler_filter_string',
- ),
- 'argument' => array(
- 'handler' => 'views_handler_argument_string',
- ),
- );
- // if joined to the node table add a "Link to Node" option for the field
- if (!$database) {
- $data['project']['name']['field']['handler'] = 'views_handler_field_node_optional';
- }
-
- //Field: description (varchar -255)
- $data['project']['description'] = array(
- 'title' => t('Description'),
- 'help' => t('A short description of the project'),
- 'field' => array(
- 'handler' => 'views_handler_field',
- 'click sortable' => TRUE,
- ),
- 'sort' => array(
- 'handler' => 'views_handler_sort',
- ),
- 'filter' => array(
- 'handler' => 'views_handler_filter_string',
- ),
- 'argument' => array(
- 'handler' => 'views_handler_argument_string',
- ),
- );
-
- /*.......................................................
- * Beginning of Example Field definitions
- * Remove this section when done
- //Field: plain_text_field (chado datatype)
- $data['project']['plain_text_field'] = array(
- 'title' => t('Human-Readable Name'),
- 'help' => t('Description of this field.'),
- 'field' => array(
- 'handler' => 'views_handler_field',
- 'click sortable' => TRUE,
- ),
- 'sort' => array(
- 'handler' => 'views_handler_sort',
- ),
- 'filter' => array(
- 'handler' => 'views_handler_filter_string',
- ),
- 'argument' => array(
- 'handler' => 'views_handler_argument_string',
- ),
- );
- //Field: numeric_field (chado datatype)
- $data['project']['numeric_field'] = array(
- 'title' => t('Human-Readable Name'),
- 'help' => t('Description of this field.'),
- 'field' => array(
- 'handler' => 'views_handler_field_numeric',
- 'click sortable' => TRUE,
- ),
- 'sort' => array(
- 'handler' => 'views_handler_sort',
- ),
- 'filter' => array(
- 'handler' => 'views_handler_filter_numeric',
- ),
- );
- //Field: boolean_field (chado datatype)
- $data['project']['boolean_field'] = array(
- 'title' => t('Human-Readable Name'),
- 'help' => t('Description of this field.'),
- 'field' => array(
- 'handler' => 'views_handler_field_boolean',
- 'click sortable' => TRUE,
- ),
- 'sort' => array(
- 'handler' => 'views_handler_sort',
- ),
- 'filter' => array(
- 'handler' => 'views_handler_filter_boolean_operator',
- ),
- );
- //Field: unix_timestamp (chado datatype)
- $data['project']['unix_timestamp'] = array(
- 'title' => t('Human-Readable Name'),
- 'help' => t('Description of this field.'),
- 'field' => array(
- 'handler' => 'views_handler_field_date',
- 'click sortable' => TRUE,
- ),
- 'sort' => array(
- 'handler' => 'views_handler_sort_date',
- ),
- 'filter' => array(
- 'handler' => 'views_handler_filter_date',
- ),
- );
- //Field: human_readable_date (chado datatype)
- $data['project']['human_readable_date'] = array(
- 'title' => t('Human-Readable Name'),
- 'help' => t('Description of this field.'),
- 'field' => array(
- 'handler' => 'views_handler_field_readble_date',
- 'click sortable' => TRUE,
- ),
- 'sort' => array(
- 'handler' => 'views_handler_sort_date',
- ),
- );
-
- * End of Example Field definitions
- */
-
- return $data;
- }
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