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- <?php
- /**
- * @file
- * Implements hooks from the Schema API
- */
- /**
- * Implements hook_disable().
- * Disable default views when module is disabled
- *
- * @ingroup tripal_legacy_natural_diversity
- */
- function tripal_natural_diversity_disable() {
- // Disable all default views provided by this module
- require_once("tripal_natural_diversity.views_default.inc");
- $views = tripal_natural_diversity_views_default_views();
- foreach (array_keys($views) as $view_name) {
- tripal_disable_view($view_name,FALSE,array('suppress_error' => TRUE));
- }
- }
- /**
- * Implementation of hook_requirements().
- *
- * @ingroup tripal_legacy_natural_diversity
- */
- function tripal_natural_diversity_requirements($phase) {
- $requirements = array();
- if ($phase == 'install') {
- // make sure chado is installed
- if (!$GLOBALS["chado_is_installed"]) {
- $requirements ['tripal_natural_diversity'] = array(
- 'title' => "tripal_natural_diversity",
- 'value' => "ERROR: Chado must be installed before this module can be enabled",
- 'severity' => REQUIREMENT_ERROR,
- );
- }
- }
- return $requirements;
- }
- /**
- * Implementation of hook_install().
- *
- * @ingroup tripal_legacy_natural_diversity
- */
- function tripal_natural_diversity_install() {
- // add cvterms
- tripal_natural_diversity_add_cvterms();
- }
- /**
- * Implementation of hook_uninstall().
- *
- * @ingroup tripal_legacy_natural_diversity
- */
- function tripal_natural_diversity_uninstall() {
- }
- /**
- * Add cvterms related to natural diversity
- *
- * @ingroup tripal_legacy_natural_diversity
- */
- function tripal_natural_diversity_add_cvterms(){
- // add cvterms for the nd_experiment_types
- tripal_insert_cvterm(
- array(
- 'name' => 'Genotyping',
- 'definition' => 'An experiment where genotypes of individuals are identified.',
- 'cv_name' => 'nd_experiment_types',
- 'is_relationship' => 0,
- 'db_name' => 'tripal'
- ),
- array('update_existing' => TRUE)
- );
- tripal_insert_cvterm(
- array(
- 'name' => 'Phenotyping',
- 'definition' => 'An experiment where phenotypes of individuals are identified.',
- 'cv_name' => 'nd_experiment_types',
- 'is_relationship' => 0,
- 'db_name' => 'tripal'
- ),
- array('update_existing' => TRUE)
- );
- tripal_insert_cvterm(
- array(
- 'name' => 'Location',
- 'definition' => 'The name of the location.',
- 'cv_name' => 'nd_geolocation_property',
- 'is_relationship' => 0,
- 'db_name' => 'tripal'
- ),
- array('update_existing' => TRUE)
- );
- }
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