tripal/tripal_stock/theme/tripal_stock/tripal_stock_base.tpl.php

<?php
$stock = $node->stock;
$organism = $node->stock->organism_id;
$main_db_reference = $stock->dbxref_id;

// expand the text fields
$stock = tripal_core_expand_chado_vars($stock, 'field', 'stock.description');
$stock = tripal_core_expand_chado_vars($stock, 'field', 'stock.uniquename');
?>
<div id="tripal_stock-base-box" class="tripal_stock-info-box tripal-info-box">
  <div class="tripal_stock-info-box-title tripal-info-box-title">Details</div>
  <!-- <div class="tripal_stock-info-box-desc tripal-info-box-desc"></div> --><?php 
  
  // the $headers array is an array of fields to use as the colum headers. 
  // additional documentation can be found here 
  // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
  // This table for the stock has a vertical header (down the first column)
  // so we do not provide headers here, but specify them in the $rows array below.
  $headers = array();
  
  // the $rows array contains an array of rows where each row is an array
  // of values for each column of the table in that row.  Additional documentation
  // can be found here:
  // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7 
  $rows = array();
  
  // Stock Name
  $rows[] = array(
    array(
      'data' => 'Name',
      'header' => TRUE,
    ),
    $stock->name
  );
  // Stock Unique Name
  $rows[] = array(
    array(
      'data' => 'Stock Name',
      'header' => TRUE,
    ),
    $stock->uniquename
  );
  // Stock Type
  $rows[] = array(
    array(
      'data' => 'Type',
      'header' => TRUE,
    ),
    ucwords(preg_replace('/_/', ' ', $stock->type_id->name))
  );

  // Organism
  $organism = $stock->organism_id->genus ." " . $stock->organism_id->species ." (" . $stock->organism_id->common_name .")";
  if (property_exists($stock->organism_id, 'nid')) {
    $organism = l("<i>" . $stock->organism_id->genus . " " . $stock->organism_id->species . "</i> (" . $stock->organism_id->common_name .")", "node/".$stock->organism_id->nid, array('html' => TRUE));
  }
  $rows[] = array(
    array(
      'data' => 'Organism',
      'header' => TRUE
    ),
    $organism
  );
  // allow site admins to see the stock ID
  if (user_access('access administration pages')) {
    // stock ID
    $rows[] = array(
      array(
        'data' => 'Stock ID',
        'header' => TRUE,
        'class' => 'tripal-site-admin-only-table-row',
      ),
      array(
        'data' => $stock->stock_id,
        'class' => 'tripal-site-admin-only-table-row',
      ),
    );
  }
  // Is Obsolete Row
  if($stock->is_obsolete == TRUE){
    $rows[] = array(
      array(
        'data' => '<div class="tripal_stock-obsolete">This stock is obsolete</div>',
        'colspan' => 2
      ),
    );
  }
  // the $table array contains the headers and rows array as well as other
  // options for controlling the display of the table.  Additional
  // documentation can be found here:
  // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
  $table = array(
    'header' => $headers,
    'rows' => $rows,
    'attributes' => array(
      'id' => 'tripal_stock-table-base',
    ),
    'sticky' => FALSE,
    'caption' => '',
    'colgroups' => array(),
    'empty' => '',
  );
  
  // once we have our table array structure defined, we call Drupal's theme_table()
  // function to generate the table.
  print theme_table($table);
  
  // add in the description if there is one
  if (property_exists($stock, 'description')) { ?>
    <div style="text-align: justify"><?php print $stock->description; ?></div> <?php  
  } ?>
</div>