tripal_core.views_default.inc 43 KB

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  1. <?php
  2. /**
  3. * @file
  4. * Describes core default views
  5. */
  6. /**
  7. * Describes core default views
  8. *
  9. * @ingroup tripal_core
  10. */
  11. function tripal_core_views_default_views() {
  12. $views = array();
  13. $view = tripal_core_admin_defaultview_jobs();
  14. $views[$view->name] = $view;
  15. $view = tripal_core_admin_defaultview_custom_tables();
  16. $views[$view->name] = $view;
  17. $view = tripal_core_admin_defaultview_mviews();
  18. $views[$view->name] = $view;
  19. // We only want to make this view available if the Search API module is installed
  20. // and the "Default Node Index has been enabled.
  21. $index_enabled = db_query('SELECT enabled FROM search_api_index WHERE machine_name=:name', array(':name' => 'default_node_index'))->fetchField();
  22. if (module_exists('search_api') AND $index_enabled) {
  23. $view = tripal_core_search_default_node_index();
  24. $views[$view->name] = $view;
  25. }
  26. return $views;
  27. }
  28. /**
  29. * Describes the jobs administration view.
  30. *
  31. * @ingroup tripal_core
  32. */
  33. function tripal_core_admin_defaultview_jobs() {
  34. $view = new view();
  35. $view->name = 'tripal_core_admin_jobs';
  36. $view->description = 'DO NOT DISABLE';
  37. $view->tag = 'tripal admin';
  38. $view->base_table = 'tripal_jobs';
  39. $view->human_name = 'Jobs Admin';
  40. $view->core = 7;
  41. $view->api_version = '3.0';
  42. $view->disabled = FALSE; /* Edit this to true to make a default view disabled initially */
  43. /* Display: Master */
  44. $handler = $view->new_display('default', 'Master', 'default');
  45. $handler->display->display_options['title'] = 'Jobs';
  46. $handler->display->display_options['use_more_always'] = FALSE;
  47. $handler->display->display_options['access']['type'] = 'none';
  48. $handler->display->display_options['cache']['type'] = 'none';
  49. $handler->display->display_options['query']['type'] = 'views_query';
  50. $handler->display->display_options['exposed_form']['type'] = 'basic';
  51. $handler->display->display_options['exposed_form']['options']['submit_button'] = 'Filter';
  52. $handler->display->display_options['pager']['type'] = 'full';
  53. $handler->display->display_options['pager']['options']['items_per_page'] = '25';
  54. $handler->display->display_options['style_plugin'] = 'table';
  55. $handler->display->display_options['style_options']['columns'] = array(
  56. 'job_id' => 'job_id',
  57. 'job_name' => 'job_name',
  58. 'submit_date' => 'submit_date',
  59. 'start_time' => 'start_time',
  60. 'end_time' => 'end_time',
  61. 'nothing' => 'nothing',
  62. 'priority' => 'priority',
  63. 'progress' => 'progress',
  64. 'status' => 'status',
  65. 'nothing_2' => 'nothing_2',
  66. 'nothing_3' => 'nothing_3',
  67. 'nothing_1' => 'nothing_1',
  68. );
  69. $handler->display->display_options['style_options']['default'] = 'job_id';
  70. $handler->display->display_options['style_options']['info'] = array(
  71. 'job_id' => array(
  72. 'sortable' => 1,
  73. 'default_sort_order' => 'desc',
  74. 'align' => '',
  75. 'separator' => '',
  76. 'empty_column' => 0,
  77. ),
  78. 'job_name' => array(
  79. 'sortable' => 1,
  80. 'default_sort_order' => 'asc',
  81. 'align' => '',
  82. 'separator' => '',
  83. 'empty_column' => 0,
  84. ),
  85. 'submit_date' => array(
  86. 'sortable' => 0,
  87. 'default_sort_order' => 'asc',
  88. 'align' => '',
  89. 'separator' => '',
  90. 'empty_column' => 0,
  91. ),
  92. 'start_time' => array(
  93. 'sortable' => 0,
  94. 'default_sort_order' => 'asc',
  95. 'align' => '',
  96. 'separator' => '',
  97. 'empty_column' => 0,
  98. ),
  99. 'end_time' => array(
  100. 'sortable' => 0,
  101. 'default_sort_order' => 'asc',
  102. 'align' => '',
  103. 'separator' => '',
  104. 'empty_column' => 0,
  105. ),
  106. 'nothing' => array(
  107. 'align' => '',
  108. 'separator' => '',
  109. 'empty_column' => 0,
  110. ),
  111. 'priority' => array(
  112. 'sortable' => 1,
  113. 'default_sort_order' => 'asc',
  114. 'align' => '',
  115. 'separator' => '',
  116. 'empty_column' => 0,
  117. ),
  118. 'progress' => array(
  119. 'sortable' => 1,
  120. 'default_sort_order' => 'asc',
  121. 'align' => '',
  122. 'separator' => '',
  123. 'empty_column' => 0,
  124. ),
  125. 'status' => array(
  126. 'sortable' => 1,
  127. 'default_sort_order' => 'asc',
  128. 'align' => '',
  129. 'separator' => '',
  130. 'empty_column' => 0,
  131. ),
  132. 'nothing_2' => array(
  133. 'align' => '',
  134. 'separator' => '',
  135. 'empty_column' => 0,
  136. ),
  137. 'nothing_3' => array(
  138. 'align' => '',
  139. 'separator' => '',
  140. 'empty_column' => 0,
  141. ),
  142. 'nothing_1' => array(
  143. 'align' => '',
  144. 'separator' => '',
  145. 'empty_column' => 0,
  146. ),
  147. );
  148. /* Header: Global: Text area */
  149. $handler->display->display_options['header']['area']['id'] = 'area';
  150. $handler->display->display_options['header']['area']['table'] = 'views';
  151. $handler->display->display_options['header']['area']['field'] = 'area';
  152. $handler->display->display_options['header']['area']['label'] = 'Description';
  153. $handler->display->display_options['header']['area']['empty'] = TRUE;
  154. $handler->display->display_options['header']['area']['content'] = '<p>Waiting jobs are executed first by priority level (the lower the number the higher the priority) and second by the order they were entered.</p>';
  155. $handler->display->display_options['header']['area']['format'] = 'filtered_html';
  156. /* Field: Tripal Jobs: Job ID */
  157. $handler->display->display_options['fields']['job_id']['id'] = 'job_id';
  158. $handler->display->display_options['fields']['job_id']['table'] = 'tripal_jobs';
  159. $handler->display->display_options['fields']['job_id']['field'] = 'job_id';
  160. $handler->display->display_options['fields']['job_id']['label'] = '';
  161. $handler->display->display_options['fields']['job_id']['element_class'] = 'extra-short-column';
  162. $handler->display->display_options['fields']['job_id']['element_label_class'] = 'extra-short-column';
  163. $handler->display->display_options['fields']['job_id']['element_label_colon'] = FALSE;
  164. $handler->display->display_options['fields']['job_id']['separator'] = '';
  165. /* Field: Tripal Jobs: Job Name */
  166. $handler->display->display_options['fields']['job_name']['id'] = 'job_name';
  167. $handler->display->display_options['fields']['job_name']['table'] = 'tripal_jobs';
  168. $handler->display->display_options['fields']['job_name']['field'] = 'job_name';
  169. $handler->display->display_options['fields']['job_name']['alter']['make_link'] = TRUE;
  170. $handler->display->display_options['fields']['job_name']['alter']['path'] = 'admin/tripal/tripal_jobs/view/[job_id]';
  171. /* Field: Tripal Jobs: Submit Date */
  172. $handler->display->display_options['fields']['submit_date']['id'] = 'submit_date';
  173. $handler->display->display_options['fields']['submit_date']['table'] = 'tripal_jobs';
  174. $handler->display->display_options['fields']['submit_date']['field'] = 'submit_date';
  175. $handler->display->display_options['fields']['submit_date']['exclude'] = TRUE;
  176. $handler->display->display_options['fields']['submit_date']['date_format'] = 'long';
  177. /* Field: Tripal Jobs: Start Time */
  178. $handler->display->display_options['fields']['start_time']['id'] = 'start_time';
  179. $handler->display->display_options['fields']['start_time']['table'] = 'tripal_jobs';
  180. $handler->display->display_options['fields']['start_time']['field'] = 'start_time';
  181. $handler->display->display_options['fields']['start_time']['exclude'] = TRUE;
  182. $handler->display->display_options['fields']['start_time']['date_format'] = 'long';
  183. /* Field: Tripal Jobs: End Time */
  184. $handler->display->display_options['fields']['end_time']['id'] = 'end_time';
  185. $handler->display->display_options['fields']['end_time']['table'] = 'tripal_jobs';
  186. $handler->display->display_options['fields']['end_time']['field'] = 'end_time';
  187. $handler->display->display_options['fields']['end_time']['exclude'] = TRUE;
  188. $handler->display->display_options['fields']['end_time']['date_format'] = 'long';
  189. /* Field: Global: Custom text */
  190. $handler->display->display_options['fields']['nothing']['id'] = 'nothing';
  191. $handler->display->display_options['fields']['nothing']['table'] = 'views';
  192. $handler->display->display_options['fields']['nothing']['field'] = 'nothing';
  193. $handler->display->display_options['fields']['nothing']['label'] = 'Dates';
  194. $handler->display->display_options['fields']['nothing']['alter']['text'] = 'Submitted: [submit_date]<br />
  195. Started: [start_time]<br />
  196. Ended: [end_time]';
  197. /* Field: Tripal Jobs: Priority */
  198. $handler->display->display_options['fields']['priority']['id'] = 'priority';
  199. $handler->display->display_options['fields']['priority']['table'] = 'tripal_jobs';
  200. $handler->display->display_options['fields']['priority']['field'] = 'priority';
  201. $handler->display->display_options['fields']['priority']['element_class'] = 'short-column';
  202. $handler->display->display_options['fields']['priority']['element_label_class'] = 'short-column';
  203. $handler->display->display_options['fields']['priority']['separator'] = '';
  204. /* Field: Tripal Jobs: Progress */
  205. $handler->display->display_options['fields']['progress']['id'] = 'progress';
  206. $handler->display->display_options['fields']['progress']['table'] = 'tripal_jobs';
  207. $handler->display->display_options['fields']['progress']['field'] = 'progress';
  208. $handler->display->display_options['fields']['progress']['element_class'] = 'short-column';
  209. $handler->display->display_options['fields']['progress']['element_label_class'] = 'short-column';
  210. $handler->display->display_options['fields']['progress']['separator'] = '';
  211. $handler->display->display_options['fields']['progress']['suffix'] = '%';
  212. /* Field: Tripal Jobs: Status */
  213. $handler->display->display_options['fields']['status']['id'] = 'status';
  214. $handler->display->display_options['fields']['status']['table'] = 'tripal_jobs';
  215. $handler->display->display_options['fields']['status']['field'] = 'status';
  216. $handler->display->display_options['fields']['status']['element_class'] = 'short-column';
  217. $handler->display->display_options['fields']['status']['element_label_class'] = 'short-column';
  218. /* Field: Global: Custom text */
  219. $handler->display->display_options['fields']['nothing_2']['id'] = 'nothing_2';
  220. $handler->display->display_options['fields']['nothing_2']['table'] = 'views';
  221. $handler->display->display_options['fields']['nothing_2']['field'] = 'nothing';
  222. $handler->display->display_options['fields']['nothing_2']['label'] = 'Re-run Link';
  223. $handler->display->display_options['fields']['nothing_2']['exclude'] = TRUE;
  224. $handler->display->display_options['fields']['nothing_2']['alter']['text'] = 'Re-run';
  225. $handler->display->display_options['fields']['nothing_2']['alter']['make_link'] = TRUE;
  226. $handler->display->display_options['fields']['nothing_2']['alter']['path'] = 'admin/tripal/tripal_jobs/rerun/[job_id]';
  227. /* Field: Global: Custom text */
  228. $handler->display->display_options['fields']['nothing_3']['id'] = 'nothing_3';
  229. $handler->display->display_options['fields']['nothing_3']['table'] = 'views';
  230. $handler->display->display_options['fields']['nothing_3']['field'] = 'nothing';
  231. $handler->display->display_options['fields']['nothing_3']['label'] = 'Cancel link';
  232. $handler->display->display_options['fields']['nothing_3']['exclude'] = TRUE;
  233. $handler->display->display_options['fields']['nothing_3']['alter']['text'] = 'Cancel';
  234. $handler->display->display_options['fields']['nothing_3']['alter']['make_link'] = TRUE;
  235. $handler->display->display_options['fields']['nothing_3']['alter']['path'] = 'admin/tripal/tripal_jobs/cancel/[job_id]';
  236. /* Field: Global: Custom text */
  237. $handler->display->display_options['fields']['nothing_1']['id'] = 'nothing_1';
  238. $handler->display->display_options['fields']['nothing_1']['table'] = 'views';
  239. $handler->display->display_options['fields']['nothing_1']['field'] = 'nothing';
  240. $handler->display->display_options['fields']['nothing_1']['label'] = 'Action';
  241. $handler->display->display_options['fields']['nothing_1']['alter']['text'] = '[nothing_2]<br />
  242. [nothing_3]';
  243. $handler->display->display_options['fields']['nothing_1']['element_class'] = 'short-column';
  244. $handler->display->display_options['fields']['nothing_1']['element_label_class'] = 'short-column';
  245. /* Filter criterion: Tripal Jobs: Job Name */
  246. $handler->display->display_options['filters']['job_name']['id'] = 'job_name';
  247. $handler->display->display_options['filters']['job_name']['table'] = 'tripal_jobs';
  248. $handler->display->display_options['filters']['job_name']['field'] = 'job_name';
  249. $handler->display->display_options['filters']['job_name']['operator'] = 'contains';
  250. $handler->display->display_options['filters']['job_name']['exposed'] = TRUE;
  251. $handler->display->display_options['filters']['job_name']['expose']['operator_id'] = 'job_name_op';
  252. $handler->display->display_options['filters']['job_name']['expose']['label'] = 'Job Name Contains';
  253. $handler->display->display_options['filters']['job_name']['expose']['operator'] = 'job_name_op';
  254. $handler->display->display_options['filters']['job_name']['expose']['identifier'] = 'job_name';
  255. $handler->display->display_options['filters']['job_name']['expose']['remember_roles'] = array(
  256. 2 => '2',
  257. 1 => 0,
  258. 3 => 0,
  259. );
  260. /* Filter criterion: Tripal Jobs: Module Name */
  261. $handler->display->display_options['filters']['modulename']['id'] = 'modulename';
  262. $handler->display->display_options['filters']['modulename']['table'] = 'tripal_jobs';
  263. $handler->display->display_options['filters']['modulename']['field'] = 'modulename';
  264. $handler->display->display_options['filters']['modulename']['exposed'] = TRUE;
  265. $handler->display->display_options['filters']['modulename']['expose']['operator_id'] = 'modulename_op';
  266. $handler->display->display_options['filters']['modulename']['expose']['label'] = 'Submitting Module';
  267. $handler->display->display_options['filters']['modulename']['expose']['operator'] = 'modulename_op';
  268. $handler->display->display_options['filters']['modulename']['expose']['identifier'] = 'modulename';
  269. $handler->display->display_options['filters']['modulename']['expose']['remember_roles'] = array(
  270. 2 => '2',
  271. 1 => 0,
  272. 3 => 0,
  273. );
  274. /* Filter criterion: Tripal Jobs: Status */
  275. $handler->display->display_options['filters']['status']['id'] = 'status';
  276. $handler->display->display_options['filters']['status']['table'] = 'tripal_jobs';
  277. $handler->display->display_options['filters']['status']['field'] = 'status';
  278. $handler->display->display_options['filters']['status']['exposed'] = TRUE;
  279. $handler->display->display_options['filters']['status']['expose']['operator_id'] = 'status_op';
  280. $handler->display->display_options['filters']['status']['expose']['label'] = 'Job Status';
  281. $handler->display->display_options['filters']['status']['expose']['operator'] = 'status_op';
  282. $handler->display->display_options['filters']['status']['expose']['identifier'] = 'status';
  283. $handler->display->display_options['filters']['status']['expose']['remember_roles'] = array(
  284. 2 => '2',
  285. 1 => 0,
  286. 3 => 0,
  287. );
  288. /* Display: Page */
  289. $handler = $view->new_display('page', 'Page', 'page');
  290. $handler->display->display_options['path'] = 'admin/tripal/tripal_jobs/jobs';
  291. $handler->display->display_options['menu']['type'] = 'default tab';
  292. $handler->display->display_options['menu']['title'] = 'Jobs';
  293. $handler->display->display_options['menu']['description'] = 'Jobs managed by Tripal';
  294. $handler->display->display_options['menu']['weight'] = '-10';
  295. $handler->display->display_options['menu']['context'] = 0;
  296. $handler->display->display_options['menu']['context_only_inline'] = 0;
  297. $handler->display->display_options['tab_options']['weight'] = '0';
  298. return $view;
  299. }
  300. /**
  301. * Describes the custom tables administration view.
  302. *
  303. * @ingroup tripal_core
  304. */
  305. function tripal_core_admin_defaultview_custom_tables() {
  306. $view = new view();
  307. $view->name = 'tripal_core_admin_custom_table';
  308. $view->description = 'DO NOT DISABLE';
  309. $view->tag = 'tripal admin';
  310. $view->base_table = 'tripal_custom_tables';
  311. $view->human_name = 'Tripal Custom Table Admin';
  312. $view->core = 7;
  313. $view->api_version = '3.0';
  314. $view->disabled = FALSE; /* Edit this to true to make a default view disabled initially */
  315. /* Display: Master */
  316. $handler = $view->new_display('default', 'Master', 'default');
  317. $handler->display->display_options['title'] = 'Custom Tables';
  318. $handler->display->display_options['use_more_always'] = FALSE;
  319. $handler->display->display_options['access']['type'] = 'none';
  320. $handler->display->display_options['cache']['type'] = 'none';
  321. $handler->display->display_options['query']['type'] = 'views_query';
  322. $handler->display->display_options['exposed_form']['type'] = 'basic';
  323. $handler->display->display_options['exposed_form']['options']['submit_button'] = 'Filter';
  324. $handler->display->display_options['pager']['type'] = 'full';
  325. $handler->display->display_options['pager']['options']['items_per_page'] = '25';
  326. $handler->display->display_options['style_plugin'] = 'table';
  327. /* Header: Global: Action Links */
  328. $handler->display->display_options['header']['action_links_area']['id'] = 'action_links_area';
  329. $handler->display->display_options['header']['action_links_area']['table'] = 'views';
  330. $handler->display->display_options['header']['action_links_area']['field'] = 'action_links_area';
  331. $handler->display->display_options['header']['action_links_area']['label'] = 'Action Links';
  332. $handler->display->display_options['header']['action_links_area']['empty'] = TRUE;
  333. $handler->display->display_options['header']['action_links_area']['link-1'] = array(
  334. 'label-1' => 'Add Custom Table',
  335. 'path-1' => 'admin/tripal/schema/custom_tables/new',
  336. );
  337. $handler->display->display_options['header']['action_links_area']['link-2'] = array(
  338. 'label-2' => '',
  339. 'path-2' => '',
  340. );
  341. $handler->display->display_options['header']['action_links_area']['link-3'] = array(
  342. 'label-3' => '',
  343. 'path-3' => '',
  344. );
  345. $handler->display->display_options['header']['action_links_area']['link-4'] = array(
  346. 'label-4' => '',
  347. 'path-4' => '',
  348. );
  349. /* Field: Tripal Custom Tables: Custom Table ID */
  350. $handler->display->display_options['fields']['table_id']['id'] = 'table_id';
  351. $handler->display->display_options['fields']['table_id']['table'] = 'tripal_custom_tables';
  352. $handler->display->display_options['fields']['table_id']['field'] = 'table_id';
  353. $handler->display->display_options['fields']['table_id']['label'] = 'ID';
  354. $handler->display->display_options['fields']['table_id']['element_class'] = 'extra-short-column';
  355. $handler->display->display_options['fields']['table_id']['element_label_class'] = 'extra-short-column';
  356. $handler->display->display_options['fields']['table_id']['element_label_colon'] = FALSE;
  357. $handler->display->display_options['fields']['table_id']['separator'] = '';
  358. /* Field: Tripal Custom Tables: Table Name */
  359. $handler->display->display_options['fields']['table_name']['id'] = 'table_name';
  360. $handler->display->display_options['fields']['table_name']['table'] = 'tripal_custom_tables';
  361. $handler->display->display_options['fields']['table_name']['field'] = 'table_name';
  362. $handler->display->display_options['fields']['table_name']['label'] = 'Name';
  363. $handler->display->display_options['fields']['table_name']['alter']['make_link'] = TRUE;
  364. $handler->display->display_options['fields']['table_name']['alter']['path'] = 'admin/tripal/schema/custom_tables/view/[table_id]';
  365. /* Field: Tripal Custom Tables: Materialized View ID */
  366. $handler->display->display_options['fields']['mview_id']['id'] = 'mview_id';
  367. $handler->display->display_options['fields']['mview_id']['table'] = 'tripal_custom_tables';
  368. $handler->display->display_options['fields']['mview_id']['field'] = 'mview_id';
  369. $handler->display->display_options['fields']['mview_id']['label'] = 'Is MView';
  370. $handler->display->display_options['fields']['mview_id']['alter']['alter_text'] = TRUE;
  371. $handler->display->display_options['fields']['mview_id']['alter']['text'] = 'Yes';
  372. $handler->display->display_options['fields']['mview_id']['hide_empty'] = TRUE;
  373. $handler->display->display_options['fields']['mview_id']['empty_zero'] = TRUE;
  374. /* Field: Global: Custom text */
  375. $handler->display->display_options['fields']['nothing']['id'] = 'nothing';
  376. $handler->display->display_options['fields']['nothing']['table'] = 'views';
  377. $handler->display->display_options['fields']['nothing']['field'] = 'nothing';
  378. $handler->display->display_options['fields']['nothing']['label'] = 'Edit Link';
  379. $handler->display->display_options['fields']['nothing']['exclude'] = TRUE;
  380. $handler->display->display_options['fields']['nothing']['alter']['text'] = 'Edit';
  381. $handler->display->display_options['fields']['nothing']['alter']['make_link'] = TRUE;
  382. $handler->display->display_options['fields']['nothing']['alter']['path'] = 'admin/tripal/schema/custom_tables/edit/[table_id]';
  383. /* Field: Global: Custom text */
  384. $handler->display->display_options['fields']['nothing_1']['id'] = 'nothing_1';
  385. $handler->display->display_options['fields']['nothing_1']['table'] = 'views';
  386. $handler->display->display_options['fields']['nothing_1']['field'] = 'nothing';
  387. $handler->display->display_options['fields']['nothing_1']['label'] = 'Delete Link';
  388. $handler->display->display_options['fields']['nothing_1']['exclude'] = TRUE;
  389. $handler->display->display_options['fields']['nothing_1']['alter']['text'] = 'Delete';
  390. $handler->display->display_options['fields']['nothing_1']['alter']['make_link'] = TRUE;
  391. $handler->display->display_options['fields']['nothing_1']['alter']['path'] = 'admin/tripal/schema/custom_tables/delete/[table_id]';
  392. /* Field: Global: Custom text */
  393. $handler->display->display_options['fields']['nothing_2']['id'] = 'nothing_2';
  394. $handler->display->display_options['fields']['nothing_2']['table'] = 'views';
  395. $handler->display->display_options['fields']['nothing_2']['field'] = 'nothing';
  396. $handler->display->display_options['fields']['nothing_2']['label'] = '';
  397. $handler->display->display_options['fields']['nothing_2']['alter']['text'] = '[nothing] [nothing_1]';
  398. $handler->display->display_options['fields']['nothing_2']['element_label_colon'] = FALSE;
  399. /* Filter criterion: Tripal Custom Tables: Table Name */
  400. $handler->display->display_options['filters']['table_name']['id'] = 'table_name';
  401. $handler->display->display_options['filters']['table_name']['table'] = 'tripal_custom_tables';
  402. $handler->display->display_options['filters']['table_name']['field'] = 'table_name';
  403. $handler->display->display_options['filters']['table_name']['exposed'] = TRUE;
  404. $handler->display->display_options['filters']['table_name']['expose']['operator_id'] = 'table_name_op';
  405. $handler->display->display_options['filters']['table_name']['expose']['label'] = 'Table Name';
  406. $handler->display->display_options['filters']['table_name']['expose']['operator'] = 'table_name_op';
  407. $handler->display->display_options['filters']['table_name']['expose']['identifier'] = 'table_name';
  408. $handler->display->display_options['filters']['table_name']['expose']['remember_roles'] = array(
  409. 2 => '2',
  410. 1 => 0,
  411. 3 => 0,
  412. );
  413. /* Display: Page */
  414. $handler = $view->new_display('page', 'Page', 'page');
  415. $handler->display->display_options['path'] = 'admin/tripal/schema/custom_tables/tables';
  416. $handler->display->display_options['menu']['type'] = 'default tab';
  417. $handler->display->display_options['menu']['title'] = 'Custom Tables';
  418. $handler->display->display_options['menu']['description'] = 'A list of existing custom tables';
  419. $handler->display->display_options['menu']['weight'] = '-10';
  420. $handler->display->display_options['menu']['name'] = 'management';
  421. $handler->display->display_options['menu']['context'] = 0;
  422. $handler->display->display_options['menu']['context_only_inline'] = 0;
  423. $handler->display->display_options['tab_options']['weight'] = '0';
  424. return $view;
  425. }
  426. /**
  427. * Describes the materialized views administration view.
  428. *
  429. * @ingroup tripal_core
  430. */
  431. function tripal_core_admin_defaultview_mviews() {
  432. $view = new view();
  433. $view->name = 'tripal_core_admin_mviews';
  434. $view->description = 'DO NOT DISABLE';
  435. $view->tag = 'tripal admin';
  436. $view->base_table = 'tripal_mviews';
  437. $view->human_name = 'MView Admin';
  438. $view->core = 7;
  439. $view->api_version = '3.0';
  440. $view->disabled = FALSE; /* Edit this to true to make a default view disabled initially */
  441. /* Display: Master */
  442. $handler = $view->new_display('default', 'Master', 'default');
  443. $handler->display->display_options['title'] = 'Materialized Views';
  444. $handler->display->display_options['use_more_always'] = FALSE;
  445. $handler->display->display_options['access']['type'] = 'none';
  446. $handler->display->display_options['cache']['type'] = 'none';
  447. $handler->display->display_options['query']['type'] = 'views_query';
  448. $handler->display->display_options['exposed_form']['type'] = 'basic';
  449. $handler->display->display_options['exposed_form']['options']['submit_button'] = 'Filter';
  450. $handler->display->display_options['pager']['type'] = 'full';
  451. $handler->display->display_options['pager']['options']['items_per_page'] = '25';
  452. $handler->display->display_options['style_plugin'] = 'table';
  453. $handler->display->display_options['style_options']['columns'] = array(
  454. 'mview_id' => 'mview_id',
  455. 'name' => 'name',
  456. 'mv_table' => 'mv_table',
  457. 'comment' => 'comment',
  458. 'last_update' => 'last_update',
  459. 'status' => 'status',
  460. );
  461. $handler->display->display_options['style_options']['default'] = 'mview_id';
  462. $handler->display->display_options['style_options']['info'] = array(
  463. 'mview_id' => array(
  464. 'sortable' => 1,
  465. 'default_sort_order' => 'asc',
  466. 'align' => '',
  467. 'separator' => '',
  468. 'empty_column' => 0,
  469. ),
  470. 'name' => array(
  471. 'sortable' => 1,
  472. 'default_sort_order' => 'asc',
  473. 'align' => '',
  474. 'separator' => '',
  475. 'empty_column' => 0,
  476. ),
  477. 'mv_table' => array(
  478. 'sortable' => 1,
  479. 'default_sort_order' => 'asc',
  480. 'align' => '',
  481. 'separator' => '',
  482. 'empty_column' => 0,
  483. ),
  484. 'comment' => array(
  485. 'sortable' => 0,
  486. 'default_sort_order' => 'asc',
  487. 'align' => '',
  488. 'separator' => '',
  489. 'empty_column' => 0,
  490. ),
  491. 'last_update' => array(
  492. 'sortable' => 1,
  493. 'default_sort_order' => 'asc',
  494. 'align' => '',
  495. 'separator' => '',
  496. 'empty_column' => 0,
  497. ),
  498. 'status' => array(
  499. 'sortable' => 1,
  500. 'default_sort_order' => 'asc',
  501. 'align' => '',
  502. 'separator' => '',
  503. 'empty_column' => 0,
  504. ),
  505. );
  506. /* Header: Global: Text area */
  507. $handler->display->display_options['header']['area']['id'] = 'area';
  508. $handler->display->display_options['header']['area']['table'] = 'views';
  509. $handler->display->display_options['header']['area']['field'] = 'area';
  510. $handler->display->display_options['header']['area']['label'] = 'Description';
  511. $handler->display->display_options['header']['area']['empty'] = TRUE;
  512. $handler->display->display_options['header']['area']['content'] = '<p>Materialized Views (MViews) are custom tables populated with a defined SQL statement. Because Chado is highly normalized and highly constrained it serves as a wonderful data storage platform, but unfortunately some queries may be slow. MViews alleviate slowness by aggregating data into tables that are more easy to query. Use MViews to create tables for custom search pages or custom Tripal module development.</p>
  513. <p>MViews behaves in the following way:</p>
  514. <ul>
  515. <li>The SQL statement defined for an MVIEW will be used to populate the table</li>
  516. <li>Altering the table structure of an MView will cause the MView table to be dropped and recreated. All records in the MView will be lost.</li>
  517. <li>Altering the query of an existing view will not change the MView table. No records will be lost.</li>
  518. <li>Repopulating an MView that is already populated will result in replacement of all records.</li>
  519. <li>A database transaction will be used when populating MViews. Therefore replacement of records does not occur until the query completes. Any search forms or pages dependent on the MView will continue to function.</li>
  520. </ul>';
  521. $handler->display->display_options['header']['area']['format'] = 'full_html';
  522. /* Header: Global: Action Links */
  523. $handler->display->display_options['header']['action_links_area']['id'] = 'action_links_area';
  524. $handler->display->display_options['header']['action_links_area']['table'] = 'views';
  525. $handler->display->display_options['header']['action_links_area']['field'] = 'action_links_area';
  526. $handler->display->display_options['header']['action_links_area']['label'] = 'Action Links';
  527. $handler->display->display_options['header']['action_links_area']['link-1'] = array(
  528. 'label-1' => 'Add Materialized View',
  529. 'path-1' => 'admin/tripal/schema/mviews/new',
  530. );
  531. $handler->display->display_options['header']['action_links_area']['link-2'] = array(
  532. 'label-2' => '',
  533. 'path-2' => '',
  534. );
  535. $handler->display->display_options['header']['action_links_area']['link-3'] = array(
  536. 'label-3' => '',
  537. 'path-3' => '',
  538. );
  539. $handler->display->display_options['header']['action_links_area']['link-4'] = array(
  540. 'label-4' => '',
  541. 'path-4' => '',
  542. );
  543. /* Field: Tripal Materialized Views: Materialized View ID */
  544. $handler->display->display_options['fields']['mview_id']['id'] = 'mview_id';
  545. $handler->display->display_options['fields']['mview_id']['table'] = 'tripal_mviews';
  546. $handler->display->display_options['fields']['mview_id']['field'] = 'mview_id';
  547. $handler->display->display_options['fields']['mview_id']['label'] = '';
  548. $handler->display->display_options['fields']['mview_id']['element_class'] = 'extra-short-column';
  549. $handler->display->display_options['fields']['mview_id']['element_label_class'] = 'extra-short-column';
  550. $handler->display->display_options['fields']['mview_id']['element_label_colon'] = FALSE;
  551. $handler->display->display_options['fields']['mview_id']['separator'] = '';
  552. /* Field: Tripal Materialized Views: Name */
  553. $handler->display->display_options['fields']['name']['id'] = 'name';
  554. $handler->display->display_options['fields']['name']['table'] = 'tripal_mviews';
  555. $handler->display->display_options['fields']['name']['field'] = 'name';
  556. $handler->display->display_options['fields']['name']['alter']['make_link'] = TRUE;
  557. $handler->display->display_options['fields']['name']['alter']['path'] = 'admin/tripal/schema/mviews/report/[mview_id]';
  558. /* Field: Tripal Materialized Views: Table */
  559. $handler->display->display_options['fields']['mv_table']['id'] = 'mv_table';
  560. $handler->display->display_options['fields']['mv_table']['table'] = 'tripal_mviews';
  561. $handler->display->display_options['fields']['mv_table']['field'] = 'mv_table';
  562. $handler->display->display_options['fields']['mv_table']['label'] = 'Table Name';
  563. /* Field: Tripal Materialized Views: Description */
  564. $handler->display->display_options['fields']['comment']['id'] = 'comment';
  565. $handler->display->display_options['fields']['comment']['table'] = 'tripal_mviews';
  566. $handler->display->display_options['fields']['comment']['field'] = 'comment';
  567. /* Field: Tripal Materialized Views: Updated */
  568. $handler->display->display_options['fields']['last_update']['id'] = 'last_update';
  569. $handler->display->display_options['fields']['last_update']['table'] = 'tripal_mviews';
  570. $handler->display->display_options['fields']['last_update']['field'] = 'last_update';
  571. $handler->display->display_options['fields']['last_update']['label'] = 'Last Updated';
  572. $handler->display->display_options['fields']['last_update']['date_format'] = 'long';
  573. /* Field: Tripal Materialized Views: Status */
  574. $handler->display->display_options['fields']['status']['id'] = 'status';
  575. $handler->display->display_options['fields']['status']['table'] = 'tripal_mviews';
  576. $handler->display->display_options['fields']['status']['field'] = 'status';
  577. $handler->display->display_options['fields']['status']['empty'] = 'Not yet populated';
  578. /* Field: Global: Custom text */
  579. $handler->display->display_options['fields']['nothing']['id'] = 'nothing';
  580. $handler->display->display_options['fields']['nothing']['table'] = 'views';
  581. $handler->display->display_options['fields']['nothing']['field'] = 'nothing';
  582. $handler->display->display_options['fields']['nothing']['label'] = 'Edit Link';
  583. $handler->display->display_options['fields']['nothing']['exclude'] = TRUE;
  584. $handler->display->display_options['fields']['nothing']['alter']['text'] = 'Edit';
  585. $handler->display->display_options['fields']['nothing']['alter']['make_link'] = TRUE;
  586. $handler->display->display_options['fields']['nothing']['alter']['path'] = 'admin/tripal/schema/mviews/edit/[mview_id]';
  587. /* Field: Global: Custom text */
  588. $handler->display->display_options['fields']['nothing_1']['id'] = 'nothing_1';
  589. $handler->display->display_options['fields']['nothing_1']['table'] = 'views';
  590. $handler->display->display_options['fields']['nothing_1']['field'] = 'nothing';
  591. $handler->display->display_options['fields']['nothing_1']['label'] = 'Delete Link';
  592. $handler->display->display_options['fields']['nothing_1']['exclude'] = TRUE;
  593. $handler->display->display_options['fields']['nothing_1']['alter']['text'] = 'Delete';
  594. $handler->display->display_options['fields']['nothing_1']['alter']['make_link'] = TRUE;
  595. $handler->display->display_options['fields']['nothing_1']['alter']['path'] = 'admin/tripal/schema/mviews/delete/[mview_id]';
  596. /* Field: Global: Custom text */
  597. $handler->display->display_options['fields']['nothing_2']['id'] = 'nothing_2';
  598. $handler->display->display_options['fields']['nothing_2']['table'] = 'views';
  599. $handler->display->display_options['fields']['nothing_2']['field'] = 'nothing';
  600. $handler->display->display_options['fields']['nothing_2']['label'] = 'Populate Link';
  601. $handler->display->display_options['fields']['nothing_2']['exclude'] = TRUE;
  602. $handler->display->display_options['fields']['nothing_2']['alter']['text'] = 'Populate';
  603. $handler->display->display_options['fields']['nothing_2']['alter']['make_link'] = TRUE;
  604. $handler->display->display_options['fields']['nothing_2']['alter']['path'] = 'admin/tripal/schema/mviews/update/[mview_id]';
  605. /* Field: Global: Custom text */
  606. $handler->display->display_options['fields']['nothing_3']['id'] = 'nothing_3';
  607. $handler->display->display_options['fields']['nothing_3']['table'] = 'views';
  608. $handler->display->display_options['fields']['nothing_3']['field'] = 'nothing';
  609. $handler->display->display_options['fields']['nothing_3']['label'] = '';
  610. $handler->display->display_options['fields']['nothing_3']['alter']['text'] = '[nothing] [nothing_1]<br />
  611. [nothing_2]';
  612. $handler->display->display_options['fields']['nothing_3']['element_class'] = 'short-column';
  613. $handler->display->display_options['fields']['nothing_3']['element_label_class'] = 'short-column';
  614. $handler->display->display_options['fields']['nothing_3']['element_label_colon'] = FALSE;
  615. /* Filter criterion: Tripal Materialized Views: Name */
  616. $handler->display->display_options['filters']['name']['id'] = 'name';
  617. $handler->display->display_options['filters']['name']['table'] = 'tripal_mviews';
  618. $handler->display->display_options['filters']['name']['field'] = 'name';
  619. $handler->display->display_options['filters']['name']['group'] = 1;
  620. $handler->display->display_options['filters']['name']['exposed'] = TRUE;
  621. $handler->display->display_options['filters']['name']['expose']['operator_id'] = 'name_op';
  622. $handler->display->display_options['filters']['name']['expose']['label'] = 'Name';
  623. $handler->display->display_options['filters']['name']['expose']['operator'] = 'name_op';
  624. $handler->display->display_options['filters']['name']['expose']['identifier'] = 'name';
  625. $handler->display->display_options['filters']['name']['expose']['remember_roles'] = array(
  626. 2 => '2',
  627. 1 => 0,
  628. 3 => 0,
  629. );
  630. /* Filter criterion: Tripal Materialized Views: Table */
  631. $handler->display->display_options['filters']['mv_table']['id'] = 'mv_table';
  632. $handler->display->display_options['filters']['mv_table']['table'] = 'tripal_mviews';
  633. $handler->display->display_options['filters']['mv_table']['field'] = 'mv_table';
  634. $handler->display->display_options['filters']['mv_table']['group'] = 1;
  635. $handler->display->display_options['filters']['mv_table']['exposed'] = TRUE;
  636. $handler->display->display_options['filters']['mv_table']['expose']['operator_id'] = 'mv_table_op';
  637. $handler->display->display_options['filters']['mv_table']['expose']['label'] = 'Table Name';
  638. $handler->display->display_options['filters']['mv_table']['expose']['operator'] = 'mv_table_op';
  639. $handler->display->display_options['filters']['mv_table']['expose']['identifier'] = 'mv_table';
  640. $handler->display->display_options['filters']['mv_table']['expose']['remember_roles'] = array(
  641. 2 => '2',
  642. 1 => 0,
  643. 3 => 0,
  644. );
  645. /* Filter criterion: Tripal Materialized Views: Module Name */
  646. $handler->display->display_options['filters']['modulename']['id'] = 'modulename';
  647. $handler->display->display_options['filters']['modulename']['table'] = 'tripal_mviews';
  648. $handler->display->display_options['filters']['modulename']['field'] = 'modulename';
  649. $handler->display->display_options['filters']['modulename']['group'] = 1;
  650. $handler->display->display_options['filters']['modulename']['exposed'] = TRUE;
  651. $handler->display->display_options['filters']['modulename']['expose']['operator_id'] = 'modulename_op';
  652. $handler->display->display_options['filters']['modulename']['expose']['label'] = 'Module';
  653. $handler->display->display_options['filters']['modulename']['expose']['operator'] = 'modulename_op';
  654. $handler->display->display_options['filters']['modulename']['expose']['identifier'] = 'modulename';
  655. $handler->display->display_options['filters']['modulename']['expose']['remember_roles'] = array(
  656. 2 => '2',
  657. 1 => 0,
  658. 3 => 0,
  659. );
  660. /* Filter criterion: Tripal Materialized Views: Status */
  661. $handler->display->display_options['filters']['status']['id'] = 'status';
  662. $handler->display->display_options['filters']['status']['table'] = 'tripal_mviews';
  663. $handler->display->display_options['filters']['status']['field'] = 'status';
  664. $handler->display->display_options['filters']['status']['group'] = 1;
  665. $handler->display->display_options['filters']['status']['exposed'] = TRUE;
  666. $handler->display->display_options['filters']['status']['expose']['operator_id'] = 'status_op';
  667. $handler->display->display_options['filters']['status']['expose']['label'] = 'Status';
  668. $handler->display->display_options['filters']['status']['expose']['operator'] = 'status_op';
  669. $handler->display->display_options['filters']['status']['expose']['identifier'] = 'status';
  670. $handler->display->display_options['filters']['status']['expose']['remember_roles'] = array(
  671. 2 => '2',
  672. 1 => 0,
  673. 3 => 0,
  674. );
  675. /* Display: Page */
  676. $handler = $view->new_display('page', 'Page', 'page');
  677. $handler->display->display_options['path'] = 'admin/tripal/schema/mviews/mviews';
  678. $handler->display->display_options['menu']['type'] = 'default tab';
  679. $handler->display->display_options['menu']['title'] = 'Materialized Views';
  680. $handler->display->display_options['menu']['description'] = 'a list of mviews';
  681. $handler->display->display_options['menu']['weight'] = '-10';
  682. $handler->display->display_options['menu']['name'] = 'management';
  683. $handler->display->display_options['menu']['context'] = 0;
  684. $handler->display->display_options['menu']['context_only_inline'] = 0;
  685. $handler->display->display_options['tab_options']['weight'] = '0';
  686. return $view;
  687. }
  688. /**
  689. * Provides a default search view for the Search API "Default Node Index".
  690. */
  691. function tripal_core_search_default_node_index() {
  692. $view = new view();
  693. $view->name = 'search_api_default_node_search';
  694. $view->description = 'A default keyword-based search view using the search API "Default node index".';
  695. $view->tag = 'search';
  696. $view->base_table = 'search_api_index_default_node_index';
  697. $view->human_name = 'Search Nodes';
  698. $view->core = 7;
  699. $view->api_version = '3.0';
  700. $view->disabled = TRUE; /* Edit this to true to make a default view disabled initially */
  701. /* Display: Master */
  702. $handler = $view->new_display('default', 'Master', 'default');
  703. $handler->display->display_options['title'] = 'Search Pages';
  704. $handler->display->display_options['use_more_always'] = FALSE;
  705. $handler->display->display_options['access']['type'] = 'none';
  706. $handler->display->display_options['cache']['type'] = 'none';
  707. $handler->display->display_options['query']['type'] = 'views_query';
  708. $handler->display->display_options['exposed_form']['type'] = 'input_required';
  709. $handler->display->display_options['exposed_form']['options']['submit_button'] = 'Search';
  710. $handler->display->display_options['exposed_form']['options']['expose_sort_order'] = FALSE;
  711. $handler->display->display_options['exposed_form']['options']['text_input_required'] = '';
  712. $handler->display->display_options['exposed_form']['options']['text_input_required_format'] = 'filtered_html';
  713. $handler->display->display_options['pager']['type'] = 'full';
  714. $handler->display->display_options['pager']['options']['items_per_page'] = '10';
  715. $handler->display->display_options['style_plugin'] = 'default';
  716. $handler->display->display_options['row_plugin'] = 'fields';
  717. /* Field: Content: Rendered Node */
  718. $handler->display->display_options['fields']['rendered_entity']['id'] = 'rendered_entity';
  719. $handler->display->display_options['fields']['rendered_entity']['table'] = 'views_entity_node';
  720. $handler->display->display_options['fields']['rendered_entity']['field'] = 'rendered_entity';
  721. $handler->display->display_options['fields']['rendered_entity']['label'] = '';
  722. $handler->display->display_options['fields']['rendered_entity']['element_label_colon'] = FALSE;
  723. $handler->display->display_options['fields']['rendered_entity']['link_to_entity'] = 1;
  724. $handler->display->display_options['fields']['rendered_entity']['display'] = 'view';
  725. $handler->display->display_options['fields']['rendered_entity']['view_mode'] = 'teaser';
  726. $handler->display->display_options['fields']['rendered_entity']['bypass_access'] = 0;
  727. /* Sort criterion: Search: Relevance */
  728. $handler->display->display_options['sorts']['search_api_relevance']['id'] = 'search_api_relevance';
  729. $handler->display->display_options['sorts']['search_api_relevance']['table'] = 'search_api_index_default_node_index';
  730. $handler->display->display_options['sorts']['search_api_relevance']['field'] = 'search_api_relevance';
  731. $handler->display->display_options['sorts']['search_api_relevance']['order'] = 'DESC';
  732. /* Filter criterion: Search: Fulltext search */
  733. $handler->display->display_options['filters']['search_api_views_fulltext']['id'] = 'search_api_views_fulltext';
  734. $handler->display->display_options['filters']['search_api_views_fulltext']['table'] = 'search_api_index_default_node_index';
  735. $handler->display->display_options['filters']['search_api_views_fulltext']['field'] = 'search_api_views_fulltext';
  736. $handler->display->display_options['filters']['search_api_views_fulltext']['operator'] = 'OR';
  737. $handler->display->display_options['filters']['search_api_views_fulltext']['exposed'] = TRUE;
  738. $handler->display->display_options['filters']['search_api_views_fulltext']['expose']['operator_id'] = 'search_api_views_fulltext_op';
  739. $handler->display->display_options['filters']['search_api_views_fulltext']['expose']['label'] = 'Keywords';
  740. $handler->display->display_options['filters']['search_api_views_fulltext']['expose']['operator'] = 'search_api_views_fulltext_op';
  741. $handler->display->display_options['filters']['search_api_views_fulltext']['expose']['identifier'] = 'keywords';
  742. $handler->display->display_options['filters']['search_api_views_fulltext']['expose']['remember_roles'] = array(
  743. 2 => '2',
  744. 1 => 0,
  745. 3 => 0,
  746. );
  747. /* Display: Page */
  748. $handler = $view->new_display('page', 'Page', 'page');
  749. $handler->display->display_options['path'] = 'search/node';
  750. return $view;
  751. }