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|
- <?php
- /**
- * Retrieves the schema for all tables
- * This function is deprecated
- *
- * @ingroup tripal_schema_api
- */
- function tripal_core_get_chado_schema (){
- $schema['organism_dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'organism_dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('organism_dbxref_id'),
- 'unique keys' => array(
- 'organism_dbxref_c1' => array('organism_id', 'dbxref_id')
- ),
- 'indexes' => array(
- 'organism_dbxref_idx1' => array('organism_id'),
- 'organism_dbxref_idx2' => array('dbxref_id'),
- ),
- );
- $schema['organismprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'organismprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('organismprop_id'),
- 'unique keys' => array(
- 'organismprop_c1' => array('organism_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'organismprop_idx1' => array('organism_id'),
- 'organismprop_idx2' => array('type_id'),
- ),
- );
- $schema['phendesc'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phendesc_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'genotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'environment_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('phendesc_id'),
- 'unique keys' => array(
- 'phendesc_c1' => array('genotype_id', 'environment_id', 'type_id', 'pub_id')
- ),
- 'indexes' => array(
- 'phendesc_idx1' => array('genotype_id'),
- 'phendesc_idx2' => array('environment_id'),
- 'phendesc_idx3' => array('pub_id'),
- ),
- );
- $schema['phenotype'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phenotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'observable_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'attr_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'cvalue_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'assay_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('phenotype_id'),
- 'unique keys' => array(
- 'phenotype_c1' => array('uniquename')
- ),
- 'indexes' => array(
- 'phenotype_idx1' => array('cvalue_id'),
- 'phenotype_idx2' => array('observable_id'),
- 'phenotype_idx3' => array('attr_id'),
- ),
- );
- $schema['organism'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'abbreviation' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'genus' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'species' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'common_name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'comment' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('organism_id'),
- 'unique keys' => array(
- 'organism_c1' => array('genus', 'species')
- ),
- );
- $schema['materialized_view'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'materialized_view_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'last_update' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => FALSE,
- ),
- 'refresh_time' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '64',
- 'not null' => FALSE,
- ),
- 'mv_schema' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '64',
- 'not null' => FALSE,
- ),
- 'mv_table' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '128',
- 'not null' => FALSE,
- ),
- 'mv_specs' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'indexed' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'query' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'special_index' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'unique keys' => array(
- 'name' => array('name')
- ),
- );
- $schema['libraryprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'libraryprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('libraryprop_id'),
- 'unique keys' => array(
- 'libraryprop_c1' => array('library_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'libraryprop_idx1' => array('library_id'),
- 'libraryprop_idx2' => array('type_id'),
- ),
- );
- $schema['libraryprop_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'libraryprop_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'libraryprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('libraryprop_pub_id'),
- 'unique keys' => array(
- 'libraryprop_pub_c1' => array('libraryprop_id', 'pub_id')
- ),
- 'indexes' => array(
- 'libraryprop_pub_idx1' => array('libraryprop_id'),
- 'libraryprop_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['magedocumentation'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'magedocumentation_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'mageml_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'tableinfo_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'row_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'mageidentifier' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('magedocumentation_id'),
- 'indexes' => array(
- 'magedocumentation_idx1' => array('mageml_id'),
- 'magedocumentation_idx2' => array('tableinfo_id'),
- 'magedocumentation_idx3' => array('row_id'),
- ),
- );
- $schema['mageml'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'mageml_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'mage_package' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'mage_ml' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('mageml_id'),
- );
- $schema['phenotype_comparison'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phenotype_comparison_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'genotype1_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'environment1_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'genotype2_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'environment2_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'phenotype1_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'phenotype2_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('phenotype_comparison_id'),
- 'unique keys' => array(
- 'phenotype_comparison_c1' => array('genotype1_id', 'environment1_id', 'genotype2_id', 'environment2_id', 'phenotype1_id', 'pub_id')
- ),
- 'indexes' => array(
- 'phenotype_comparison_idx1' => array('genotype1_id'),
- 'phenotype_comparison_idx2' => array('genotype2_id'),
- 'phenotype_comparison_idx4' => array('pub_id'),
- ),
- );
- $schema['phenotype_comparison_cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phenotype_comparison_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'phenotype_comparison_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('phenotype_comparison_cvterm_id'),
- 'unique keys' => array(
- 'phenotype_comparison_cvterm_c1' => array('phenotype_comparison_id', 'cvterm_id')
- ),
- 'indexes' => array(
- 'phenotype_comparison_cvterm_idx1' => array('phenotype_comparison_id'),
- 'phenotype_comparison_cvterm_idx2' => array('cvterm_id'),
- ),
- );
- $schema['phylonode_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phylonode_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'phylotree_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('phylonode_relationship_id'),
- 'unique keys' => array(
- 'subject_id' => array('subject_id', 'object_id', 'type_id')
- ),
- 'indexes' => array(
- 'phylonode_relationship_idx1' => array('subject_id'),
- 'phylonode_relationship_idx2' => array('object_id'),
- 'phylonode_relationship_idx3' => array('type_id'),
- ),
- );
- $schema['phylonodeprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phylonodeprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'phylonode_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- 'default' => '',
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('phylonodeprop_id'),
- 'unique keys' => array(
- 'phylonode_id' => array('phylonode_id', 'type_id', 'value', 'rank')
- ),
- 'indexes' => array(
- 'phylonodeprop_idx1' => array('phylonode_id'),
- 'phylonodeprop_idx2' => array('type_id'),
- ),
- );
- $schema['phylotree'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phylotree_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'analysis_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'comment' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('phylotree_id'),
- 'indexes' => array(
- 'phylotree_idx1' => array('phylotree_id'),
- ),
- );
- $schema['phylotree_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phylotree_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'phylotree_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('phylotree_pub_id'),
- 'unique keys' => array(
- 'phylotree_id' => array('phylotree_id', 'pub_id')
- ),
- 'indexes' => array(
- 'phylotree_pub_idx1' => array('phylotree_id'),
- 'phylotree_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['phylonode_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phylonode_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'phylonode_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('phylonode_pub_id'),
- 'unique keys' => array(
- 'phylonode_id' => array('phylonode_id', 'pub_id')
- ),
- 'indexes' => array(
- 'phylonode_pub_idx1' => array('phylonode_id'),
- 'phylonode_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['phylonode_organism'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phylonode_organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'phylonode_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('phylonode_organism_id'),
- 'unique keys' => array(
- 'phylonode_id' => array('phylonode_id')
- ),
- 'indexes' => array(
- 'phylonode_organism_idx1' => array('phylonode_id'),
- 'phylonode_organism_idx2' => array('organism_id'),
- ),
- );
- $schema['phenotype_cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phenotype_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'phenotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('phenotype_cvterm_id'),
- 'unique keys' => array(
- 'phenotype_cvterm_c1' => array('phenotype_id', 'cvterm_id', 'rank')
- ),
- 'indexes' => array(
- 'phenotype_cvterm_idx1' => array('phenotype_id'),
- 'phenotype_cvterm_idx2' => array('cvterm_id'),
- ),
- );
- $schema['phenstatement'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phenstatement_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'genotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'environment_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'phenotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('phenstatement_id'),
- 'unique keys' => array(
- 'phenstatement_c1' => array('genotype_id', 'phenotype_id', 'environment_id', 'type_id', 'pub_id')
- ),
- 'indexes' => array(
- 'phenstatement_idx1' => array('genotype_id'),
- 'phenstatement_idx2' => array('phenotype_id'),
- ),
- );
- $schema['phylonode'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phylonode_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'phylotree_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'parent_phylonode_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'left_idx' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'right_idx' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'label' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'distance' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'float',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('phylonode_id'),
- 'unique keys' => array(
- 'phylotree_id' => array('phylotree_id', 'left_idx'),
- 'phylonode_phylotree_id_key1' => array('phylotree_id', 'right_idx')
- ),
- );
- $schema['phylonode_dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'phylonode_dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'phylonode_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('phylonode_dbxref_id'),
- 'unique keys' => array(
- 'phylonode_id' => array('phylonode_id', 'dbxref_id')
- ),
- 'indexes' => array(
- 'phylonode_dbxref_idx1' => array('phylonode_id'),
- 'phylonode_dbxref_idx2' => array('dbxref_id'),
- ),
- );
- $schema['library_synonym'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'library_synonym_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'synonym_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_current' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'ru',
- ),
- 'is_internal' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- ),
- 'primary key' => array('library_synonym_id'),
- 'unique keys' => array(
- 'library_synonym_c1' => array('synonym_id', 'library_id', 'pub_id')
- ),
- 'indexes' => array(
- 'library_synonym_idx1' => array('synonym_id'),
- 'library_synonym_idx2' => array('library_id'),
- 'library_synonym_idx3' => array('pub_id'),
- ),
- );
- $schema['library_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'library_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('library_pub_id'),
- 'unique keys' => array(
- 'library_pub_c1' => array('library_id', 'pub_id')
- ),
- 'indexes' => array(
- 'library_pub_idx1' => array('library_id'),
- 'library_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['featureprop_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'featureprop_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'featureprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('featureprop_pub_id'),
- 'unique keys' => array(
- 'featureprop_pub_c1' => array('featureprop_id', 'pub_id')
- ),
- 'indexes' => array(
- 'featureprop_pub_idx1' => array('featureprop_id'),
- 'featureprop_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['featureprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'featureprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('featureprop_id'),
- 'unique keys' => array(
- 'featureprop_c1' => array('feature_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'featureprop_idx1' => array('feature_id'),
- 'featureprop_idx2' => array('type_id'),
- ),
- );
- $schema['featurerange'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'featurerange_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'featuremap_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'leftstartf_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'leftendf_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'rightstartf_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'rightendf_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'rangestr' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('featurerange_id'),
- 'indexes' => array(
- 'featurerange_idx1' => array('featuremap_id'),
- 'featurerange_idx2' => array('feature_id'),
- 'featurerange_idx3' => array('leftstartf_id'),
- 'featurerange_idx4' => array('leftendf_id'),
- 'featurerange_idx5' => array('rightstartf_id'),
- 'featurerange_idx6' => array('rightendf_id'),
- ),
- );
- $schema['featureset_meets'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['fnr_type'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'type' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => FALSE,
- ),
- 'residues' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'seqlen' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'md5checksum' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'char',
- 'length' => '32',
- 'not null' => FALSE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'timeaccessioned' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => FALSE,
- ),
- 'timelastmodified' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['featurepos'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'featurepos_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'featuremap_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'map_feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'mappos' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'float',
- 'size' => 'big',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('featurepos_id'),
- 'indexes' => array(
- 'featurepos_idx1' => array('featuremap_id'),
- 'featurepos_idx2' => array('feature_id'),
- 'featurepos_idx3' => array('map_feature_id'),
- ),
- );
- $schema['featuremap_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'featuremap_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'featuremap_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('featuremap_pub_id'),
- 'indexes' => array(
- 'featuremap_pub_idx1' => array('featuremap_id'),
- 'featuremap_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['feature_union'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'srcfeature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'subject_strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'object_strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'fmin' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'fmax' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['featureloc'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'featureloc_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'srcfeature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'fmin' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'is_fmin_partial' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- 'fmax' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'is_fmax_partial' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- 'strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'phase' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'residue_info' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'locgroup' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('featureloc_id'),
- 'unique keys' => array(
- 'featureloc_c1' => array('feature_id', 'locgroup', 'rank')
- ),
- 'indexes' => array(
- 'binloc_boxrange' => array('fmin'),
- 'binloc_boxrange_src' => array('srcfeature_id', 'fmin'),
- 'featureloc_idx1' => array('feature_id'),
- 'featureloc_idx2' => array('srcfeature_id'),
- 'featureloc_idx3' => array('srcfeature_id', 'fmin', 'fmax'),
- ),
- );
- $schema['featureloc_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'featureloc_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'featureloc_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('featureloc_pub_id'),
- 'unique keys' => array(
- 'featureloc_pub_c1' => array('featureloc_id', 'pub_id')
- ),
- 'indexes' => array(
- 'featureloc_pub_idx1' => array('featureloc_id'),
- 'featureloc_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['featuremap'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'featuremap_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'unittype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('featuremap_id'),
- 'unique keys' => array(
- 'featuremap_c1' => array('name')
- ),
- );
- $schema['fp_key'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'pkey' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => FALSE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['genotype'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'genotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('genotype_id'),
- 'unique keys' => array(
- 'genotype_c1' => array('uniquename')
- ),
- 'indexes' => array(
- 'genotype_idx1' => array('uniquename'),
- 'genotype_idx2' => array('name'),
- ),
- );
- $schema['library_cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'library_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('library_cvterm_id'),
- 'unique keys' => array(
- 'library_cvterm_c1' => array('library_id', 'cvterm_id', 'pub_id')
- ),
- 'indexes' => array(
- 'library_cvterm_idx1' => array('library_id'),
- 'library_cvterm_idx2' => array('cvterm_id'),
- 'library_cvterm_idx3' => array('pub_id'),
- ),
- );
- $schema['library_dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'library_dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_current' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'ru',
- ),
- ),
- 'primary key' => array('library_dbxref_id'),
- 'unique keys' => array(
- 'library_dbxref_c1' => array('library_id', 'dbxref_id')
- ),
- 'indexes' => array(
- 'library_dbxref_idx1' => array('library_id'),
- 'library_dbxref_idx2' => array('dbxref_id'),
- ),
- );
- $schema['library_feature'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'library_feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('library_feature_id'),
- 'unique keys' => array(
- 'library_feature_c1' => array('library_id', 'feature_id')
- ),
- 'indexes' => array(
- 'library_feature_idx1' => array('library_id'),
- 'library_feature_idx2' => array('feature_id'),
- ),
- );
- $schema['library_feature_count'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'num_features' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'feature_type' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- ),
- 'unique keys' => array(
- 'library_feature_count_index' => array('library_id')
- ),
- );
- $schema['library'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_obsolete' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'timeaccessioned' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => TRUE,
- 'default' => 'ow(',
- ),
- 'timelastmodified' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => TRUE,
- 'default' => 'ow(',
- ),
- ),
- 'primary key' => array('library_id'),
- 'unique keys' => array(
- 'library_c1' => array('organism_id', 'uniquename', 'type_id')
- ),
- 'indexes' => array(
- 'library_idx1' => array('organism_id'),
- 'library_idx2' => array('type_id'),
- 'library_idx3' => array('uniquename'),
- 'library_name_ind1' => array('name'),
- ),
- );
- $schema['intronloc_view'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'exon1_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'exon2_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'fmin' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'fmax' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'srcfeature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['gff3atts'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'type' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'attribute' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['gff3view'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'ref' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'source' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'type' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => FALSE,
- ),
- 'fstart' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'fend' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'score' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'float',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- 'strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'phase' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'seqlen' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['gffatts'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'type' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'attribute' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['intron_combined_view'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'exon1_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'exon2_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'fmin' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'fmax' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'srcfeature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'intron_rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'transcript_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['project'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'project_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('project_id'),
- 'unique keys' => array(
- 'project_c1' => array('name')
- ),
- );
- $schema['protein_coding_gene'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'residues' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'seqlen' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'md5checksum' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'char',
- 'length' => '32',
- 'not null' => FALSE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'is_analysis' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => FALSE,
- ),
- 'is_obsolete' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => FALSE,
- ),
- 'timeaccessioned' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => FALSE,
- ),
- 'timelastmodified' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['studyfactorvalue'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'studyfactorvalue_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'studyfactor_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'assay_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'factorvalue' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('studyfactorvalue_id'),
- 'indexes' => array(
- 'studyfactorvalue_idx1' => array('studyfactor_id'),
- 'studyfactorvalue_idx2' => array('assay_id'),
- ),
- );
- $schema['studyfactor'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'studyfactor_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'studydesign_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('studyfactor_id'),
- 'indexes' => array(
- 'studyfactor_idx1' => array('studydesign_id'),
- 'studyfactor_idx2' => array('type_id'),
- ),
- );
- $schema['studyprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'studyprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'study_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('studyprop_id'),
- 'unique keys' => array(
- 'study_id' => array('study_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'studyprop_idx1' => array('study_id'),
- 'studyprop_idx2' => array('type_id'),
- ),
- );
- $schema['studyprop_feature'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'studyprop_feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'studyprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('studyprop_feature_id'),
- 'unique keys' => array(
- 'studyprop_id' => array('studyprop_id', 'feature_id')
- ),
- 'indexes' => array(
- 'studyprop_feature_idx1' => array('studyprop_id'),
- 'studyprop_feature_idx2' => array('feature_id'),
- ),
- );
- $schema['synonym'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'synonym_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'synonym_sgml' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('synonym_id'),
- 'unique keys' => array(
- 'synonym_c1' => array('name', 'type_id')
- ),
- 'indexes' => array(
- 'synonym_idx1' => array('type_id'),
- ),
- );
- $schema['studydesignprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'studydesignprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'studydesign_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('studydesignprop_id'),
- 'unique keys' => array(
- 'studydesignprop_c1' => array('studydesign_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'studydesignprop_idx1' => array('studydesign_id'),
- 'studydesignprop_idx2' => array('type_id'),
- ),
- );
- $schema['studydesign'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'studydesign_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'study_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('studydesign_id'),
- 'indexes' => array(
- 'studydesign_idx1' => array('study_id'),
- ),
- );
- $schema['stockprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stockprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'stock_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('stockprop_id'),
- 'unique keys' => array(
- 'stockprop_c1' => array('stock_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'stockprop_idx1' => array('stock_id'),
- 'stockprop_idx2' => array('type_id'),
- ),
- 'foreign keys' => array(
- 'stock' => array(
- 'table' => 'stock',
- 'columns' => array('stock_id' => 'stock_id'),
- ),
- 'cvterm' => array(
- 'table' => 'cvterm',
- 'columns' => array('type_id' => 'cvterm_id'),
- ),
- ),
- );
- $schema['stockprop_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stockprop_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'stockprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('stockprop_pub_id'),
- 'unique keys' => array(
- 'stockprop_pub_c1' => array('stockprop_id', 'pub_id')
- ),
- 'indexes' => array(
- 'stockprop_pub_idx1' => array('stockprop_id'),
- 'stockprop_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['study'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'study_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'contact_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('study_id'),
- 'unique keys' => array(
- 'study_c1' => array('name')
- ),
- 'indexes' => array(
- 'study_idx1' => array('contact_id'),
- 'study_idx2' => array('pub_id'),
- 'study_idx3' => array('dbxref_id'),
- ),
- );
- $schema['study_assay'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'study_assay_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'study_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'assay_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('study_assay_id'),
- 'unique keys' => array(
- 'study_assay_c1' => array('study_id', 'assay_id')
- ),
- 'indexes' => array(
- 'study_assay_idx1' => array('study_id'),
- 'study_assay_idx2' => array('assay_id'),
- ),
- );
- $schema['tableinfo'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'tableinfo_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '30',
- 'not null' => TRUE,
- ),
- 'primary_key_column' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '30',
- 'not null' => FALSE,
- ),
- 'is_view' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'view_on_table_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'superclass_table_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'is_updateable' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 1,
- ),
- 'modification_date' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'date',
- 'not null' => TRUE,
- 'default' => 'ow(',
- ),
- ),
- 'primary key' => array('tableinfo_id'),
- 'unique keys' => array(
- 'tableinfo_c1' => array('name')
- ),
- );
- $schema['treatment'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'treatment_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'biomaterial_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'protocol_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('treatment_id'),
- 'indexes' => array(
- 'treatment_idx1' => array('biomaterial_id'),
- 'treatment_idx2' => array('type_id'),
- 'treatment_idx3' => array('protocol_id'),
- ),
- );
- $schema['tripal_obo'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cv_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'unsigned' => TRUE,
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'file' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => FALSE,
- ),
- 'url' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('cv_id'),
- 'indexes' => array(
- 'cv_id' => array('cv_id'),
- ),
- );
- $schema['tripal_organism_views_common_name'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'nid' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'unsigned' => TRUE,
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'common_name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- 'default' => 'NA',
- ),
- ),
- );
- $schema['type_feature_count'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'type' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => FALSE,
- ),
- 'num_features' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['stockcollectionprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stockcollectionprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'stockcollection_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('stockcollectionprop_id'),
- 'unique keys' => array(
- 'stockcollectionprop_c1' => array('stockcollection_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'stockcollectionprop_idx1' => array('stockcollection_id'),
- 'stockcollectionprop_idx2' => array('type_id'),
- ),
- );
- $schema['stockcollection_stock'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stockcollection_stock_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'stockcollection_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'stock_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('stockcollection_stock_id'),
- 'unique keys' => array(
- 'stockcollection_stock_c1' => array('stockcollection_id', 'stock_id')
- ),
- 'indexes' => array(
- 'stockcollection_stock_idx1' => array('stockcollection_id'),
- 'stockcollection_stock_idx2' => array('stock_id'),
- ),
- );
- $schema['public_feature'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'vid' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'unsigned' => TRUE,
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'nid' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'unsigned' => TRUE,
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'sync_date' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('nid'),
- 'unique keys' => array(
- 'nid_vid' => array('nid', 'vid'),
- 'vid' => array('vid')
- ),
- 'indexes' => array(
- 'feature_id' => array('feature_id'),
- ),
- );
- $schema['public_library'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'vid' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'unsigned' => TRUE,
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'nid' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'unsigned' => TRUE,
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('nid'),
- 'unique keys' => array(
- 'nid_vid' => array('nid', 'vid'),
- 'vid' => array('vid')
- ),
- 'indexes' => array(
- 'library_id' => array('library_id'),
- ),
- );
- $schema['public_organism'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'vid' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'unsigned' => TRUE,
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'nid' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'unsigned' => TRUE,
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('nid'),
- 'unique keys' => array(
- 'nid_vid' => array('nid', 'vid'),
- 'vid' => array('vid')
- ),
- 'indexes' => array(
- 'organism_id' => array('organism_id'),
- ),
- );
- $schema['pubprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'pubprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('pubprop_id'),
- 'unique keys' => array(
- 'pubprop_c1' => array('pub_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'pubprop_idx1' => array('pub_id'),
- 'pubprop_idx2' => array('type_id'),
- ),
- );
- $schema['pubauthor'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'pubauthor_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'editor' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => FALSE,
- 'default' => 'als',
- ),
- 'surname' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '100',
- 'not null' => TRUE,
- ),
- 'givennames' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '100',
- 'not null' => FALSE,
- ),
- 'suffix' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '100',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('pubauthor_id'),
- 'unique keys' => array(
- 'pubauthor_c1' => array('pub_id', 'rank')
- ),
- 'indexes' => array(
- 'pubauthor_idx2' => array('pub_id'),
- ),
- );
- $schema['pub_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'pub_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('pub_relationship_id'),
- 'unique keys' => array(
- 'pub_relationship_c1' => array('subject_id', 'object_id', 'type_id')
- ),
- 'indexes' => array(
- 'pub_relationship_idx1' => array('subject_id'),
- 'pub_relationship_idx2' => array('object_id'),
- 'pub_relationship_idx3' => array('type_id'),
- ),
- );
- $schema['protocol'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'protocol_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'uri' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'protocoldescription' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'hardwaredescription' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'softwaredescription' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('protocol_id'),
- 'unique keys' => array(
- 'protocol_c1' => array('name')
- ),
- 'indexes' => array(
- 'protocol_idx1' => array('type_id'),
- 'protocol_idx2' => array('pub_id'),
- 'protocol_idx3' => array('dbxref_id'),
- ),
- );
- $schema['protocolparam'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'protocolparam_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'protocol_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'datatype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'unittype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('protocolparam_id'),
- 'indexes' => array(
- 'protocolparam_idx1' => array('protocol_id'),
- 'protocolparam_idx2' => array('datatype_id'),
- 'protocolparam_idx3' => array('unittype_id'),
- ),
- );
- $schema['pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'title' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'volumetitle' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'volume' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'series_name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'issue' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'pyear' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'pages' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'miniref' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_obsolete' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => FALSE,
- 'default' => 'als',
- ),
- 'publisher' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'pubplace' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('pub_id'),
- 'unique keys' => array(
- 'pub_c1' => array('uniquename')
- ),
- 'indexes' => array(
- 'pub_idx1' => array('type_id'),
- ),
- );
- $schema['pub_dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'pub_dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_current' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'ru',
- ),
- ),
- 'primary key' => array('pub_dbxref_id'),
- 'unique keys' => array(
- 'pub_dbxref_c1' => array('pub_id', 'dbxref_id')
- ),
- 'indexes' => array(
- 'pub_dbxref_idx1' => array('pub_id'),
- 'pub_dbxref_idx2' => array('dbxref_id'),
- ),
- );
- $schema['quantification'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'quantification_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'acquisition_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'operator_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'protocol_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'analysis_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'quantificationdate' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => FALSE,
- 'default' => 'ow(',
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'uri' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('quantification_id'),
- 'unique keys' => array(
- 'quantification_c1' => array('name', 'analysis_id')
- ),
- 'indexes' => array(
- 'quantification_idx1' => array('acquisition_id'),
- 'quantification_idx2' => array('operator_id'),
- 'quantification_idx3' => array('protocol_id'),
- 'quantification_idx4' => array('analysis_id'),
- ),
- );
- $schema['quantification_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'quantification_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('quantification_relationship_id'),
- 'unique keys' => array(
- 'quantification_relationship_c1' => array('subject_id', 'object_id', 'type_id')
- ),
- 'indexes' => array(
- 'quantification_relationship_idx1' => array('subject_id'),
- 'quantification_relationship_idx2' => array('type_id'),
- 'quantification_relationship_idx3' => array('object_id'),
- ),
- );
- $schema['stock_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stock_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'stock_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('stock_pub_id'),
- 'unique keys' => array(
- 'stock_pub_c1' => array('stock_id', 'pub_id')
- ),
- 'indexes' => array(
- 'stock_pub_idx1' => array('stock_id'),
- 'stock_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['stock_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stock_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('stock_relationship_id'),
- 'unique keys' => array(
- 'stock_relationship_c1' => array('subject_id', 'object_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'stock_relationship_idx1' => array('subject_id'),
- 'stock_relationship_idx2' => array('object_id'),
- 'stock_relationship_idx3' => array('type_id'),
- ),
- 'foreign keys' => array(
- 'stock' => array(
- 'table' => 'stock',
- 'columns' => array('subject_id' => 'stock_id'),
- ),
- 'cvterm' => array(
- 'table' => 'cvterm',
- 'columns' => array('type_id' => 'cvterm_id'),
- ),
- ),
- );
- $schema['stock_relationship_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stock_relationship_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'stock_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('stock_relationship_pub_id'),
- 'unique keys' => array(
- 'stock_relationship_pub_c1' => array('stock_relationship_id', 'pub_id')
- ),
- 'indexes' => array(
- 'stock_relationship_pub_idx1' => array('stock_relationship_id'),
- 'stock_relationship_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['stockcollection'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stockcollection_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'contact_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('stockcollection_id'),
- 'unique keys' => array(
- 'stockcollection_c1' => array('uniquename', 'type_id')
- ),
- 'indexes' => array(
- 'stockcollection_idx1' => array('contact_id'),
- 'stockcollection_idx2' => array('type_id'),
- 'stockcollection_idx3' => array('uniquename'),
- 'stockcollection_name_ind1' => array('name'),
- ),
- );
- $schema['stock_genotype'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stock_genotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'stock_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'genotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('stock_genotype_id'),
- 'unique keys' => array(
- 'stock_genotype_c1' => array('stock_id', 'genotype_id')
- ),
- 'indexes' => array(
- 'stock_genotype_idx1' => array('stock_id'),
- 'stock_genotype_idx2' => array('genotype_id'),
- ),
- );
- $schema['stock_dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stock_dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'stock_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_current' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'ru',
- ),
- ),
- 'primary key' => array('stock_dbxref_id'),
- 'unique keys' => array(
- 'stock_dbxref_c1' => array('stock_id', 'dbxref_id')
- ),
- 'indexes' => array(
- 'stock_dbxref_idx1' => array('stock_id'),
- 'stock_dbxref_idx2' => array('dbxref_id'),
- ),
- 'foreign keys' => array(
- 'dbxref' => array(
- 'table' => 'dbxref',
- 'columns' => array('dbxref_id' => 'dbxref_id'),
- ),
- 'stock' => array(
- 'table' => 'stock',
- 'columns' => array('stock_id' => 'stock_id'),
- ),
- ),
- );
- $schema['quantificationprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'quantificationprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'quantification_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('quantificationprop_id'),
- 'unique keys' => array(
- 'quantificationprop_c1' => array('quantification_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'quantificationprop_idx1' => array('quantification_id'),
- 'quantificationprop_idx2' => array('type_id'),
- ),
- );
- $schema['stats_paths_to_root'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'total_paths' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- 'avg_distance' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'numeric',
- 'not null' => FALSE,
- 'precision' => 0,
- 'scale' => 0,
- ),
- 'min_distance' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'max_distance' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['stock'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stock_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_obsolete' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- ),
- 'primary key' => array('stock_id'),
- 'unique keys' => array(
- 'stock_c1' => array('organism_id', 'uniquename', 'type_id')
- ),
- 'indexes' => array(
- 'stock_idx1' => array('dbxref_id'),
- 'stock_idx2' => array('organism_id'),
- 'stock_idx3' => array('type_id'),
- 'stock_idx4' => array('uniquename'),
- 'stock_name_ind1' => array('name'),
- ),
- 'foreign keys' => array(
- 'organism' => array(
- 'table' => 'organism',
- 'columns' => array('organism_id' => 'organism_id'),
- ),
- 'dbxref' => array(
- 'table' => 'dbxref',
- 'columns' => array('dbxref_id' => 'dbxref_id'),
- ),
- 'cvterm' => array(
- 'table' => 'cvterm',
- 'columns' => array('type_id' => 'cvterm_id'),
- ),
- ),
- );
- $schema['stock_cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'stock_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'stock_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('stock_cvterm_id'),
- 'unique keys' => array(
- 'stock_cvterm_c1' => array('stock_id', 'cvterm_id', 'pub_id')
- ),
- 'indexes' => array(
- 'stock_cvterm_idx1' => array('stock_id'),
- 'stock_cvterm_idx2' => array('cvterm_id'),
- 'stock_cvterm_idx3' => array('pub_id'),
- ),
- );
- $schema['feature_synonym'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_synonym_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'synonym_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_current' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- 'is_internal' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- ),
- 'primary key' => array('feature_synonym_id'),
- 'unique keys' => array(
- 'feature_synonym_c1' => array('synonym_id', 'feature_id', 'pub_id')
- ),
- 'indexes' => array(
- 'feature_synonym_idx1' => array('synonym_id'),
- 'feature_synonym_idx2' => array('feature_id'),
- 'feature_synonym_idx3' => array('pub_id'),
- ),
- );
- $schema['feature_relationshipprop_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_relationshipprop_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_relationshipprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('feature_relationshipprop_pub_id'),
- 'unique keys' => array(
- 'feature_relationshipprop_pub_c1' => array('feature_relationshipprop_id', 'pub_id')
- ),
- 'indexes' => array(
- 'feature_relationshipprop_pub_idx1' => array('feature_relationshipprop_id'),
- 'feature_relationshipprop_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['cell_line_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_line_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('cell_line_relationship_id'),
- 'unique keys' => array(
- 'cell_line_relationship_c1' => array('subject_id', 'object_id', 'type_id')
- ),
- );
- $schema['cell_line_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_line_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cell_line_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('cell_line_pub_id'),
- 'unique keys' => array(
- 'cell_line_pub_c1' => array('cell_line_id', 'pub_id')
- ),
- );
- $schema['cell_line_synonym'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_line_synonym_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cell_line_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'synonym_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_current' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- 'is_internal' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- ),
- 'primary key' => array('cell_line_synonym_id'),
- 'unique keys' => array(
- 'cell_line_synonym_c1' => array('synonym_id', 'cell_line_id', 'pub_id')
- ),
- );
- $schema['cell_lineprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_lineprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cell_line_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('cell_lineprop_id'),
- 'unique keys' => array(
- 'cell_lineprop_c1' => array('cell_line_id', 'type_id', 'rank')
- ),
- );
- $schema['cell_lineprop_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_lineprop_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cell_lineprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('cell_lineprop_pub_id'),
- 'unique keys' => array(
- 'cell_lineprop_pub_c1' => array('cell_lineprop_id', 'pub_id')
- ),
- );
- $schema['cell_line_library'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_line_library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cell_line_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'library_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('cell_line_library_id'),
- 'unique keys' => array(
- 'cell_line_library_c1' => array('cell_line_id', 'library_id', 'pub_id')
- ),
- );
- $schema['cell_line_feature'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_line_feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cell_line_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('cell_line_feature_id'),
- 'unique keys' => array(
- 'cell_line_feature_c1' => array('cell_line_id', 'feature_id', 'pub_id')
- ),
- );
- $schema['cell_line'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_line_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'timeaccessioned' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => TRUE,
- 'default' => 'ow(',
- ),
- 'timelastmodified' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => TRUE,
- 'default' => 'ow(',
- ),
- ),
- 'primary key' => array('cell_line_id'),
- 'unique keys' => array(
- 'cell_line_c1' => array('uniquename', 'organism_id')
- ),
- );
- $schema['cell_line_cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_line_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cell_line_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('cell_line_cvterm_id'),
- 'unique keys' => array(
- 'cell_line_cvterm_c1' => array('cell_line_id', 'cvterm_id', 'pub_id', 'rank')
- ),
- );
- $schema['cell_line_cvtermprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_line_cvtermprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cell_line_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('cell_line_cvtermprop_id'),
- 'unique keys' => array(
- 'cell_line_cvtermprop_c1' => array('cell_line_cvterm_id', 'type_id', 'rank')
- ),
- );
- $schema['cell_line_dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cell_line_dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cell_line_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_current' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'ru',
- ),
- ),
- 'primary key' => array('cell_line_dbxref_id'),
- 'unique keys' => array(
- 'cell_line_dbxref_c1' => array('cell_line_id', 'dbxref_id')
- ),
- );
- $schema['channel'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'channel_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'definition' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('channel_id'),
- 'unique keys' => array(
- 'channel_c1' => array('name')
- ),
- );
- $schema['common_ancestor_cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cvterm1_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'cvterm2_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'ancestor_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'pathdistance1' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'pathdistance2' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'total_pathdistance' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['cv_cvterm_count_with_obs'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'num_terms_incl_obs' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['cv_leaf'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cv_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['cv_link_count'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cv_name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'relation_name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => FALSE,
- ),
- 'relation_cv_name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'num_links' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['cv_path_count'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cv_name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'relation_name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => FALSE,
- ),
- 'relation_cv_name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'num_paths' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['cv_cvterm_count'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'num_terms_excl_obs' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['cv'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cv_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'definition' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('cv_id'),
- 'unique keys' => array(
- 'cv_c1' => array('name')
- ),
- );
- $schema['common_descendant_cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cvterm1_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'cvterm2_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'ancestor_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'pathdistance1' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'pathdistance2' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'total_pathdistance' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['contact'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'contact_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('contact_id'),
- 'unique keys' => array(
- 'contact_c1' => array('name')
- ),
- );
- $schema['contact_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'contact_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('contact_relationship_id'),
- 'unique keys' => array(
- 'contact_relationship_c1' => array('subject_id', 'object_id', 'type_id')
- ),
- 'indexes' => array(
- 'contact_relationship_idx1' => array('type_id'),
- 'contact_relationship_idx2' => array('subject_id'),
- 'contact_relationship_idx3' => array('object_id'),
- ),
- );
- $schema['control'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'control_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'assay_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'tableinfo_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'row_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('control_id'),
- 'indexes' => array(
- 'control_idx1' => array('type_id'),
- 'control_idx2' => array('assay_id'),
- 'control_idx3' => array('tableinfo_id'),
- 'control_idx4' => array('row_id'),
- ),
- );
- $schema['biomaterialprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'biomaterialprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'biomaterial_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('biomaterialprop_id'),
- 'unique keys' => array(
- 'biomaterialprop_c1' => array('biomaterial_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'biomaterialprop_idx1' => array('biomaterial_id'),
- 'biomaterialprop_idx2' => array('type_id'),
- ),
- );
- $schema['biomaterial_treatment'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'biomaterial_treatment_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'biomaterial_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'treatment_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'unittype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'float',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('biomaterial_treatment_id'),
- 'unique keys' => array(
- 'biomaterial_treatment_c1' => array('biomaterial_id', 'treatment_id')
- ),
- 'indexes' => array(
- 'biomaterial_treatment_idx1' => array('biomaterial_id'),
- 'biomaterial_treatment_idx2' => array('treatment_id'),
- 'biomaterial_treatment_idx3' => array('unittype_id'),
- ),
- );
- $schema['acquisition_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'acquisition_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('acquisition_relationship_id'),
- 'unique keys' => array(
- 'acquisition_relationship_c1' => array('subject_id', 'object_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'acquisition_relationship_idx1' => array('subject_id'),
- 'acquisition_relationship_idx2' => array('type_id'),
- 'acquisition_relationship_idx3' => array('object_id'),
- ),
- );
- $schema['acquisition'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'acquisition_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'assay_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'protocol_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'channel_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'acquisitiondate' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => FALSE,
- 'default' => 'ow(',
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'uri' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('acquisition_id'),
- 'unique keys' => array(
- 'acquisition_c1' => array('name')
- ),
- 'indexes' => array(
- 'acquisition_idx1' => array('assay_id'),
- 'acquisition_idx2' => array('protocol_id'),
- 'acquisition_idx3' => array('channel_id'),
- ),
- );
- $schema['acquisitionprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'acquisitionprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'acquisition_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('acquisitionprop_id'),
- 'unique keys' => array(
- 'acquisitionprop_c1' => array('acquisition_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'acquisitionprop_idx1' => array('acquisition_id'),
- 'acquisitionprop_idx2' => array('type_id'),
- ),
- );
- $schema['all_feature_names'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['analysis'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'analysis_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'program' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'programversion' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'algorithm' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'sourcename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'sourceversion' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'sourceuri' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'timeexecuted' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => TRUE,
- 'default' => 'ow(',
- ),
- ),
- 'primary key' => array('analysis_id'),
- 'unique keys' => array(
- 'analysis_c1' => array('program', 'programversion', 'sourcename')
- ),
- );
- $schema['analysisfeature'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'analysisfeature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'analysis_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'rawscore' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'float',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- 'normscore' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'float',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- 'significance' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'float',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- 'identity' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'float',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('analysisfeature_id'),
- 'unique keys' => array(
- 'analysisfeature_c1' => array('feature_id', 'analysis_id')
- ),
- 'indexes' => array(
- 'analysisfeature_idx1' => array('feature_id'),
- 'analysisfeature_idx2' => array('analysis_id'),
- ),
- );
- $schema['analysisfeatureprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'analysisfeatureprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'analysisfeature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('analysisfeatureprop_id'),
- 'unique keys' => array(
- 'analysisfeature_id_type_id_rank' => array('analysisfeature_id', 'type_id', 'rank')
- ),
- );
- $schema['assayprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'assayprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'assay_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('assayprop_id'),
- 'unique keys' => array(
- 'assayprop_c1' => array('assay_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'assayprop_idx1' => array('assay_id'),
- 'assayprop_idx2' => array('type_id'),
- ),
- );
- $schema['biomaterial'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'biomaterial_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'taxon_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'biosourceprovider_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('biomaterial_id'),
- 'unique keys' => array(
- 'biomaterial_c1' => array('name')
- ),
- 'indexes' => array(
- 'biomaterial_idx1' => array('taxon_id'),
- 'biomaterial_idx2' => array('biosourceprovider_id'),
- 'biomaterial_idx3' => array('dbxref_id'),
- ),
- );
- $schema['biomaterial_dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'biomaterial_dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'biomaterial_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('biomaterial_dbxref_id'),
- 'unique keys' => array(
- 'biomaterial_dbxref_c1' => array('biomaterial_id', 'dbxref_id')
- ),
- 'indexes' => array(
- 'biomaterial_dbxref_idx1' => array('biomaterial_id'),
- 'biomaterial_dbxref_idx2' => array('dbxref_id'),
- ),
- );
- $schema['biomaterial_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'biomaterial_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('biomaterial_relationship_id'),
- 'unique keys' => array(
- 'biomaterial_relationship_c1' => array('subject_id', 'object_id', 'type_id')
- ),
- 'indexes' => array(
- 'biomaterial_relationship_idx1' => array('subject_id'),
- 'biomaterial_relationship_idx2' => array('object_id'),
- 'biomaterial_relationship_idx3' => array('type_id'),
- ),
- );
- $schema['assay_project'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'assay_project_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'assay_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'project_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('assay_project_id'),
- 'unique keys' => array(
- 'assay_project_c1' => array('assay_id', 'project_id')
- ),
- 'indexes' => array(
- 'assay_project_idx1' => array('assay_id'),
- 'assay_project_idx2' => array('project_id'),
- ),
- );
- $schema['assay_biomaterial'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'assay_biomaterial_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'assay_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'biomaterial_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'channel_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('assay_biomaterial_id'),
- 'unique keys' => array(
- 'assay_biomaterial_c1' => array('assay_id', 'biomaterial_id', 'channel_id', 'rank')
- ),
- 'indexes' => array(
- 'assay_biomaterial_idx1' => array('assay_id'),
- 'assay_biomaterial_idx2' => array('biomaterial_id'),
- 'assay_biomaterial_idx3' => array('channel_id'),
- ),
- );
- $schema['analysisprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'analysisprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'analysis_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('analysisprop_id'),
- 'unique keys' => array(
- 'analysisprop_c1' => array('analysis_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'analysisprop_idx1' => array('analysis_id'),
- 'analysisprop_idx2' => array('type_id'),
- ),
- );
- $schema['arraydesign'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'arraydesign_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'manufacturer_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'platformtype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'substratetype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'protocol_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'version' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'array_dimensions' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'element_dimensions' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'num_of_elements' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'num_array_columns' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'num_array_rows' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'num_grid_columns' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'num_grid_rows' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'num_sub_columns' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'num_sub_rows' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('arraydesign_id'),
- 'unique keys' => array(
- 'arraydesign_c1' => array('name')
- ),
- 'indexes' => array(
- 'arraydesign_idx1' => array('manufacturer_id'),
- 'arraydesign_idx2' => array('platformtype_id'),
- 'arraydesign_idx3' => array('substratetype_id'),
- 'arraydesign_idx4' => array('protocol_id'),
- 'arraydesign_idx5' => array('dbxref_id'),
- ),
- );
- $schema['arraydesignprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'arraydesignprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'arraydesign_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('arraydesignprop_id'),
- 'unique keys' => array(
- 'arraydesignprop_c1' => array('arraydesign_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'arraydesignprop_idx1' => array('arraydesign_id'),
- 'arraydesignprop_idx2' => array('type_id'),
- ),
- );
- $schema['assay'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'assay_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'arraydesign_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'protocol_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'assaydate' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => FALSE,
- 'default' => 'ow(',
- ),
- 'arrayidentifier' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'arraybatchidentifier' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'operator_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('assay_id'),
- 'unique keys' => array(
- 'assay_c1' => array('name')
- ),
- 'indexes' => array(
- 'assay_idx1' => array('arraydesign_id'),
- 'assay_idx2' => array('protocol_id'),
- 'assay_idx3' => array('operator_id'),
- 'assay_idx4' => array('dbxref_id'),
- ),
- );
- $schema['cv_root'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cv_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'root_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cv_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => TRUE,
- ),
- 'definition' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_obsolete' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'is_relationshiptype' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('cvterm_id'),
- 'unique keys' => array(
- 'cvterm_c1' => array('name', 'cv_id', 'is_obsolete'),
- 'cvterm_c2' => array('dbxref_id')
- ),
- 'indexes' => array(
- 'cvterm_idx1' => array('cv_id'),
- 'cvterm_idx2' => array('name'),
- 'cvterm_idx3' => array('dbxref_id'),
- ),
- 'foreign keys' => array(
- 'cv' => array(
- 'table' => 'cv',
- 'columns' => array('cv_id' => 'cv_id'),
- ),
- 'dbxref' => array(
- 'table' => 'dbxref',
- 'columns' => array('dbxref_id' => 'dbxref_id'),
- ),
- ),
- );
- $schema['feature_dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_current' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'ru',
- ),
- ),
- 'primary key' => array('feature_dbxref_id'),
- 'unique keys' => array(
- 'feature_dbxref_c1' => array('feature_id', 'dbxref_id')
- ),
- 'indexes' => array(
- 'feature_dbxref_idx1' => array('feature_id'),
- 'feature_dbxref_idx2' => array('dbxref_id'),
- ),
- );
- $schema['feature_cvtermprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_cvtermprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('feature_cvtermprop_id'),
- 'unique keys' => array(
- 'feature_cvtermprop_c1' => array('feature_cvterm_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'feature_cvtermprop_idx1' => array('feature_cvterm_id'),
- 'feature_cvtermprop_idx2' => array('type_id'),
- ),
- );
- $schema['feature_difference'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'srcfeature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'fmin' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'fmax' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['feature_disjoint'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['feature_distance'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'srcfeature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'subject_strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'object_strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'distance' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['feature_cvterm_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_cvterm_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('feature_cvterm_pub_id'),
- 'unique keys' => array(
- 'feature_cvterm_pub_c1' => array('feature_cvterm_id', 'pub_id')
- ),
- 'indexes' => array(
- 'feature_cvterm_pub_idx1' => array('feature_cvterm_id'),
- 'feature_cvterm_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['feature_cvterm_dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_cvterm_dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('feature_cvterm_dbxref_id'),
- 'unique keys' => array(
- 'feature_cvterm_dbxref_c1' => array('feature_cvterm_id', 'dbxref_id')
- ),
- 'indexes' => array(
- 'feature_cvterm_dbxref_idx1' => array('feature_cvterm_id'),
- 'feature_cvterm_dbxref_idx2' => array('dbxref_id'),
- ),
- );
- $schema['f_type'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'type' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => FALSE,
- ),
- 'residues' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'seqlen' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'md5checksum' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'char',
- 'length' => '32',
- 'not null' => FALSE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'timeaccessioned' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => FALSE,
- ),
- 'timelastmodified' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['feature'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'organism_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'residues' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'seqlen' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'md5checksum' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'char',
- 'length' => '32',
- 'not null' => FALSE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_analysis' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- 'is_obsolete' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- 'timeaccessioned' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => TRUE,
- 'default' => 'ow(',
- ),
- 'timelastmodified' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'datetime',
- 'not null' => TRUE,
- 'default' => 'ow(',
- ),
- ),
- 'primary key' => array('feature_id'),
- 'unique keys' => array(
- 'feature_c1' => array('organism_id', 'uniquename', 'type_id')
- ),
- 'indexes' => array(
- 'feature_idx1' => array('dbxref_id'),
- 'feature_idx2' => array('organism_id'),
- 'feature_idx3' => array('type_id'),
- 'feature_idx4' => array('uniquename'),
- 'feature_name_ind1' => array('name'),
- ),
- 'foreign keys' => array(
- 'organism' => array(
- 'table' => 'organism',
- 'columns' => array('organism_id' => 'organism_id'),
- ),
- 'dbxref' => array(
- 'table' => 'dbxref',
- 'columns' => array('dbxref_id' => 'dbxref_id'),
- ),
- 'cvterm' => array(
- 'table' => 'cvterm',
- 'columns' => array('type_id' => 'cvterm_id'),
- ),
- ),
- );
- $schema['feature_contains'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['feature_cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_not' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => TRUE,
- 'default' => 'als',
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('feature_cvterm_id'),
- 'unique keys' => array(
- 'feature_cvterm_c1' => array('feature_id', 'cvterm_id', 'pub_id', 'rank')
- ),
- 'indexes' => array(
- 'feature_cvterm_idx1' => array('feature_id'),
- 'feature_cvterm_idx2' => array('cvterm_id'),
- 'feature_cvterm_idx3' => array('pub_id'),
- ),
- );
- $schema['feature_expression'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_expression_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'expression_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('feature_expression_id'),
- 'unique keys' => array(
- 'feature_expression_c1' => array('expression_id', 'feature_id', 'pub_id')
- ),
- 'indexes' => array(
- 'feature_expression_idx1' => array('expression_id'),
- 'feature_expression_idx2' => array('feature_id'),
- 'feature_expression_idx3' => array('pub_id'),
- ),
- );
- $schema['feature_expressionprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_expressionprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_expression_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('feature_expressionprop_id'),
- 'unique keys' => array(
- 'feature_expressionprop_c1' => array('feature_expression_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'feature_expressionprop_idx1' => array('feature_expression_id'),
- 'feature_expressionprop_idx2' => array('type_id'),
- ),
- );
- $schema['feature_pubprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_pubprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('feature_pubprop_id'),
- 'unique keys' => array(
- 'feature_pubprop_c1' => array('feature_pub_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'feature_pubprop_idx1' => array('feature_pub_id'),
- ),
- );
- $schema['feature_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('feature_relationship_id'),
- 'unique keys' => array(
- 'feature_relationship_c1' => array('subject_id', 'object_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'feature_relationship_idx1' => array('subject_id'),
- 'feature_relationship_idx2' => array('object_id'),
- 'feature_relationship_idx3' => array('type_id'),
- ),
- );
- $schema['feature_relationship_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_relationship_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('feature_relationship_pub_id'),
- 'unique keys' => array(
- 'feature_relationship_pub_c1' => array('feature_relationship_id', 'pub_id')
- ),
- 'indexes' => array(
- 'feature_relationship_pub_idx1' => array('feature_relationship_id'),
- 'feature_relationship_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['feature_relationshipprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_relationshipprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('feature_relationshipprop_id'),
- 'unique keys' => array(
- 'feature_relationshipprop_c1' => array('feature_relationship_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'feature_relationshipprop_idx1' => array('feature_relationship_id'),
- 'feature_relationshipprop_idx2' => array('type_id'),
- ),
- );
- $schema['feature_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('feature_pub_id'),
- 'unique keys' => array(
- 'feature_pub_c1' => array('feature_id', 'pub_id')
- ),
- 'indexes' => array(
- 'feature_pub_idx1' => array('feature_id'),
- 'feature_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['feature_phenotype'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_phenotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'phenotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('feature_phenotype_id'),
- 'unique keys' => array(
- 'feature_phenotype_c1' => array('feature_id', 'phenotype_id')
- ),
- 'indexes' => array(
- 'feature_phenotype_idx1' => array('feature_id'),
- 'feature_phenotype_idx2' => array('phenotype_id'),
- ),
- );
- $schema['feature_genotype'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_genotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'genotype_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'chromosome_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cgroup' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('feature_genotype_id'),
- 'unique keys' => array(
- 'feature_genotype_c1' => array('feature_id', 'genotype_id', 'cvterm_id', 'chromosome_id', 'rank', 'cgroup')
- ),
- 'indexes' => array(
- 'feature_genotype_idx1' => array('feature_id'),
- 'feature_genotype_idx2' => array('genotype_id'),
- ),
- );
- $schema['feature_intersection'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'srcfeature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'subject_strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'object_strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'fmin' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'fmax' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['feature_meets'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['feature_meets_on_same_strand'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['f_loc'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'nbeg' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'nend' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['expressionprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'expressionprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'expression_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('expressionprop_id'),
- 'unique keys' => array(
- 'expressionprop_c1' => array('expression_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'expressionprop_idx1' => array('expression_id'),
- 'expressionprop_idx2' => array('type_id'),
- ),
- );
- $schema['db_dbxref_count'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'num_dbxrefs' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'big',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'db_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'accession' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'version' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- 'default' => '',
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('dbxref_id'),
- 'unique keys' => array(
- 'dbxref_c1' => array('db_id', 'accession', 'version')
- ),
- 'indexes' => array(
- 'dbxref_idx1' => array('db_id'),
- 'dbxref_idx2' => array('accession'),
- 'dbxref_idx3' => array('version'),
- ),
- );
- $schema['dbxrefprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'dbxrefprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- 'default' => '',
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('dbxrefprop_id'),
- 'unique keys' => array(
- 'dbxrefprop_c1' => array('dbxref_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'dbxrefprop_idx1' => array('dbxref_id'),
- 'dbxrefprop_idx2' => array('type_id'),
- ),
- );
- $schema['dfeatureloc'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'featureloc_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'srcfeature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'nbeg' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'is_nbeg_partial' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => FALSE,
- ),
- 'nend' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'is_nend_partial' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'boolean',
- 'not null' => FALSE,
- ),
- 'strand' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'size' => 'small',
- 'not null' => FALSE,
- ),
- 'phase' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'residue_info' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'locgroup' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- );
- $schema['db'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'db_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'name' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'urlprefix' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- 'url' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('db_id'),
- 'unique keys' => array(
- 'db_c1' => array('name')
- ),
- );
- $schema['cvtermsynonym'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cvtermsynonym_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'synonym' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '1024',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('cvtermsynonym_id'),
- 'unique keys' => array(
- 'cvtermsynonym_c1' => array('cvterm_id', 'synonym')
- ),
- 'indexes' => array(
- 'cvtermsynonym_idx1' => array('cvterm_id'),
- ),
- );
- $schema['cvterm_dbxref'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cvterm_dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'is_for_definition' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('cvterm_dbxref_id'),
- 'unique keys' => array(
- 'cvterm_dbxref_c1' => array('cvterm_id', 'dbxref_id')
- ),
- 'indexes' => array(
- 'cvterm_dbxref_idx1' => array('cvterm_id'),
- 'cvterm_dbxref_idx2' => array('dbxref_id'),
- ),
- );
- $schema['cvterm_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cvterm_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('cvterm_relationship_id'),
- 'unique keys' => array(
- 'cvterm_relationship_c1' => array('subject_id', 'object_id', 'type_id')
- ),
- 'indexes' => array(
- 'cvterm_relationship_idx1' => array('type_id'),
- 'cvterm_relationship_idx2' => array('subject_id'),
- 'cvterm_relationship_idx3' => array('object_id'),
- ),
- );
- $schema['cvtermpath'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cvtermpath_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cv_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pathdistance' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('cvtermpath_id'),
- 'unique keys' => array(
- 'cvtermpath_c1' => array('subject_id', 'object_id', 'type_id', 'pathdistance')
- ),
- 'indexes' => array(
- 'cvtermpath_idx1' => array('type_id'),
- 'cvtermpath_idx2' => array('subject_id'),
- 'cvtermpath_idx3' => array('object_id'),
- 'cvtermpath_idx4' => array('cv_id'),
- ),
- );
- $schema['cvtermprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'cvtermprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- 'default' => '',
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('cvtermprop_id'),
- 'unique keys' => array(
- 'cvterm_id' => array('cvterm_id', 'type_id', 'value', 'rank')
- ),
- 'indexes' => array(
- 'cvtermprop_idx1' => array('cvterm_id'),
- 'cvtermprop_idx2' => array('type_id'),
- ),
- );
- $schema['eimage'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'eimage_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'eimage_data' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'eimage_type' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => TRUE,
- ),
- 'image_uri' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'varchar',
- 'length' => '255',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('eimage_id'),
- );
- $schema['element'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'element_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'feature_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'arraydesign_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- 'dbxref_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('element_id'),
- 'unique keys' => array(
- 'element_c1' => array('feature_id', 'arraydesign_id')
- ),
- 'indexes' => array(
- 'element_idx1' => array('feature_id'),
- 'element_idx2' => array('arraydesign_id'),
- 'element_idx3' => array('type_id'),
- 'element_idx4' => array('dbxref_id'),
- ),
- );
- $schema['expression_cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'expression_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'expression_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- 'cvterm_type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('expression_cvterm_id'),
- 'unique keys' => array(
- 'expression_cvterm_c1' => array('expression_id', 'cvterm_id', 'cvterm_type_id')
- ),
- 'indexes' => array(
- 'expression_cvterm_idx1' => array('expression_id'),
- 'expression_cvterm_idx2' => array('cvterm_id'),
- 'expression_cvterm_idx3' => array('cvterm_type_id'),
- ),
- );
- $schema['expression_cvtermprop'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'expression_cvtermprop_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'expression_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('expression_cvtermprop_id'),
- 'unique keys' => array(
- 'expression_cvtermprop_c1' => array('expression_cvterm_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'expression_cvtermprop_idx1' => array('expression_cvterm_id'),
- 'expression_cvtermprop_idx2' => array('type_id'),
- ),
- );
- $schema['expression_image'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'expression_image_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'expression_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'eimage_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('expression_image_id'),
- 'unique keys' => array(
- 'expression_image_c1' => array('expression_id', 'eimage_id')
- ),
- 'indexes' => array(
- 'expression_image_idx1' => array('expression_id'),
- 'expression_image_idx2' => array('eimage_id'),
- ),
- );
- $schema['expression_pub'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'expression_pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'expression_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'pub_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('expression_pub_id'),
- 'unique keys' => array(
- 'expression_pub_c1' => array('expression_id', 'pub_id')
- ),
- 'indexes' => array(
- 'expression_pub_idx1' => array('expression_id'),
- 'expression_pub_idx2' => array('pub_id'),
- ),
- );
- $schema['expression'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'expression_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'md5checksum' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'char',
- 'length' => '32',
- 'not null' => FALSE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('expression_id'),
- 'unique keys' => array(
- 'expression_c1' => array('uniquename')
- ),
- );
- $schema['environment_cvterm'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'environment_cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'environment_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'cvterm_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('environment_cvterm_id'),
- 'unique keys' => array(
- 'environment_cvterm_c1' => array('environment_id', 'cvterm_id')
- ),
- 'indexes' => array(
- 'environment_cvterm_idx1' => array('environment_id'),
- 'environment_cvterm_idx2' => array('cvterm_id'),
- ),
- );
- $schema['element_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'element_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('element_relationship_id'),
- 'unique keys' => array(
- 'element_relationship_c1' => array('subject_id', 'object_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'element_relationship_idx1' => array('subject_id'),
- 'element_relationship_idx2' => array('type_id'),
- 'element_relationship_idx3' => array('object_id'),
- 'element_relationship_idx4' => array('value'),
- ),
- );
- $schema['elementresult'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'elementresult_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'element_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'quantification_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'signal' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'float',
- 'size' => 'big',
- 'not null' => TRUE,
- ),
- ),
- 'primary key' => array('elementresult_id'),
- 'unique keys' => array(
- 'elementresult_c1' => array('element_id', 'quantification_id')
- ),
- 'indexes' => array(
- 'elementresult_idx1' => array('element_id'),
- 'elementresult_idx2' => array('quantification_id'),
- 'elementresult_idx3' => array('signal'),
- ),
- );
- $schema['elementresult_relationship'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'elementresult_relationship_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'subject_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'type_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'object_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- ),
- 'value' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- 'rank' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'int',
- 'not null' => TRUE,
- 'default' => 0,
- ),
- ),
- 'primary key' => array('elementresult_relationship_id'),
- 'unique keys' => array(
- 'elementresult_relationship_c1' => array('subject_id', 'object_id', 'type_id', 'rank')
- ),
- 'indexes' => array(
- 'elementresult_relationship_idx1' => array('subject_id'),
- 'elementresult_relationship_idx2' => array('type_id'),
- 'elementresult_relationship_idx3' => array('object_id'),
- 'elementresult_relationship_idx4' => array('value'),
- ),
- );
- $schema['environment'] = array(
- 'description' => t('TODO: please describe this table!'),
- 'fields' => array(
- 'environment_id' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'serial',
- 'not null' => TRUE,
- ),
- 'uniquename' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => TRUE,
- ),
- 'description' => array(
- 'description' => t('TODO: please describe this field!'),
- 'type' => 'text',
- 'not null' => FALSE,
- ),
- ),
- 'primary key' => array('environment_id'),
- 'unique keys' => array(
- 'environment_c1' => array('uniquename')
- ),
- 'indexes' => array(
- 'environment_idx1' => array('uniquename'),
- ),
- );
- return $schema;
- }
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