tripal/tripal_chado/files/taxrank.obo

format-version: 1.2
data-version: 2013-11-10
default-namespace: taxonomic_rank
remark: To the extent possible under law, Peter E. Midford has waived all copyright and related or neighboring rights to the Taxonomic Rank Vocabulary (TAXRANK). This work is published from the United States. It is requested that users of this vocabulary cite it at the following URI: http://www.phenoscape.org/wiki/Taxonomic_Rank_Vocabulary
ontology: taxrank

[Term]
id: TAXRANK:0000000
name: taxonomic_rank
def: "A level of depth of a taxon in a taxonomic hierarchy." [TAXRANK:curator]

[Term]
id: TAXRANK:0000001
name: phylum
synonym: "division" EXACT []
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Phylum
xref: NCBITaxon:phylum
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000002
name: class
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Class
xref: NCBITaxon:class
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000003
name: order
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Order
xref: NCBITaxon:order
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000004
name: family
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Family
xref: NCBITaxon:family
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000005
name: genus
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Genus
xref: NCBITaxon:genus
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000006
name: species
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Species
xref: NCBITaxon:species
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000007
name: subclass
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Subclass
xref: NCBITaxon:subclass
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000008
name: subphylum
synonym: "subdivision" EXACT []
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#SubPhylum
xref: NCBITaxon:subphylum
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000009
name: subgenus
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Subgenus
xref: NCBITaxon:subgenus
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000010
name: species_group
xref: NCBITaxon:species_group
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000011
name: species_subgroup
synonym: "species complex" EXACT []
xref: NCBITaxon:species_subgroup
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000012
name: species_complex
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000013
name: infraorder
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Infraorder
xref: NCBITaxon:infraorder
is_a: TAXRANK:0000000 ! taxonomic_rank

[Term]
id: TAXRANK:0000014
name: suborder
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Suborder
xref: NCBITaxon:suborder
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000015
name: superclass
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Superclass
xref: NCBITaxon:superclass
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000016
name: varietas
synonym: "variety" EXACT []
xref: NCBITaxon:varietas
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000017
name: kingdom
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Kingdom
xref: NCBITaxon:kingdom
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000018
name: superfamily
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Superfamily
xref: NCBITaxon:superfamily
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000019
name: infraclass
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Infraclass
xref: NCBITaxon:infraclass
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000020
name: superorder
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Superorder
xref: NCBITaxon:superorder
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000021
name: parvorder
xref: NCBITaxon:parvorder
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000022
name: superkingdom
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Superkingdom
xref: NCBITaxon:superkingdom
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000023
name: subspecies
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Subspecies
xref: NCBITaxon:subspecies
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000024
name: subfamily
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Subfamily
xref: NCBITaxon:subfamily
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000025
name: tribe
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Tribe
xref: NCBITaxon:tribe
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000026
name: forma
synonym: "form" EXACT []
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Form
xref: NCBITaxon:forma
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000027
name: superphylum
synonym: "superdivision" EXACT []
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Superphylum
xref: NCBITaxon:superphylum
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000028
name: subtribe
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Subtribe
xref: NCBITaxon:subtribe
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000029
name: subkingdom
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Subkingdom
xref: NCBITaxon:subkingdom
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000030
name: section
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Section
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000031
name: series
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Series
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000032
name: bio-variety
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Bio-variety
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000033
name: candidate
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Candidate
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000034
name: cultivar
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Cultivar
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000035
name: cultivar-group
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Cultivar-group
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000036
name: denominationclass
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#DenominationClass
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000037
name: domain
synonym: "empire" EXACT []
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Domain
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000038
name: graft-chimaera
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Graft-chimaera
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000039
name: grex
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Grex
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000040
name: infraphylum
synonym: "infradivision" EXACT []
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Infraphylum
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000041
name: infrafamily
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Infrafamily
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000042
name: infragenerictaxon
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#InfragenericTaxon
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000043
name: infragenus
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Infragenus
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000044
name: infrakingdom
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Infrakingdom
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000045
name: infraspecies
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Infraspecies
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000046
name: infraspecificTaxon
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#InfraspecificTaxon
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000047
name: infratribe
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Infratribe
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000048
name: patho-variety
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#patho-variety
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000049
name: specialform
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Specialform
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000050
name: speciesaggregate
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#SpeciesAggregate
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000051
name: subvariety
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Sub-Variety
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000052
name: subsubvariety
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Sub-Sub-Variety
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000053
name: subsection
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Subsection
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000054
name: subseries
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Subseries
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000055
name: subspecificaggregate
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#SubspecificAggregate
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000056
name: subsubform
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Subsubform
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000057
name: supertribe
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#Supertribe
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Term]
id: TAXRANK:0000058
name: supragenerictaxon
xref: http://rs.tdwg.org/ontology/voc/TaxonRank#SupragenericTaxon
is_a: TAXRANK:0000000 ! taxonomic_rank
created_by: pmidford

[Typedef]
id: TAXRANK:1000000
name: has_rank
is_metadata_tag: true