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- <?php
- $library = $variables['node']->library;
- // get the library description. IT uses a tern name of 'Library Description'
- $record = [
- 'table' => 'library',
- 'id' => $library->library_id,
- ];
- $property = [
- 'type_name' => 'Library Description',
- 'cv_name' => 'library_property',
- ];
- $libprop = chado_get_property($record, $property);
- $description = isset($libprop->value) ? $libprop->value : ''; ?>
- <div class="tripal_library-data-block-desc tripal-data-block-desc"></div> <?php
- // the $headers array is an array of fields to use as the colum headers.
- // additional documentation can be found here
- // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
- // This table for the library has a vertical header (down the first column)
- // so we do not provide headers here, but specify them in the $rows array below.
- $headers = [];
- // the $rows array contains an array of rows where each row is an array
- // of values for each column of the table in that row. Additional documentation
- // can be found here:
- // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
- $rows = [];
- // Name row
- $rows[] = [
- [
- 'data' => 'Library Name',
- 'header' => TRUE,
- 'width' => '20%',
- ],
- $library->name,
- ];
- // Unique row
- $rows[] = [
- [
- 'data' => 'Unique Name',
- 'header' => TRUE,
- ],
- $library->uniquename,
- ];
- // Organism row
- $organism = $library->organism_id->genus . " " . $library->organism_id->species . " (" . $library->organism_id->common_name . ")";
- if (property_exists($library->organism_id, 'nid')) {
- $organism = l("<i>" . $library->organism_id->genus . " " . $library->organism_id->species . "</i> (" . $library->organism_id->common_name . ")", "node/" . $library->organism_id->nid, ['html' => TRUE]);
- }
- $rows[] = [
- [
- 'data' => 'Organism',
- 'header' => TRUE,
- ],
- $organism,
- ];
- // Library Type row
- $rows[] = [
- [
- 'data' => 'Type',
- 'header' => TRUE,
- ],
- $library->type_id->name,
- ];
- // allow site admins to see the library ID
- if (user_access('view ids')) {
- // Library ID
- $rows[] = [
- [
- 'data' => 'Library ID',
- 'header' => TRUE,
- 'class' => 'tripal-site-admin-only-table-row',
- ],
- $library->library_id,
- ];
- }
- // the $table array contains the headers and rows array as well as other
- // options for controlling the display of the table. Additional
- // documentation can be found here:
- // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
- $table = [
- 'header' => $headers,
- 'rows' => $rows,
- 'attributes' => [
- 'id' => 'tripal_library-table-base',
- 'class' => 'tripal-data-table',
- ],
- 'sticky' => FALSE,
- 'caption' => '',
- 'colgroups' => [],
- 'empty' => '',
- ];
- // once we have our table array structure defined, we call Drupal's theme_table()
- // function to generate the table.
- print theme_table($table);
- // now add in the description below the table if one exists
- if ($description) { ?>
- <div style="text-align: justify"><?php print $description; ?></div> <?php
- }
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