tripal_views_integration.views.inc 5.2 KB

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  1. <?php
  2. function tripal_views_integration_views_data(){
  3. //this gets rebuild on cache clear
  4. /*
  5. * note on fields: the handlers must be able to handle the type of the field
  6. * may be an issue without validation of data entry:
  7. * how the user associated fields with which handlers.
  8. */
  9. $data['go_count_organism']['table']['group'] = t('go count organism');
  10. $data['go_count_organism']['table']['base'] = array(
  11. 'field' => 'cvterm_id',
  12. 'title' => t('go count organism table'),
  13. 'help' => t("go count organism table contains mview data."), //garbage explanation for now
  14. );
  15. $data['go_count_organism']['cvname'] = array(
  16. 'title' => t('cvname text field'),
  17. 'help' => t(' text field.'),
  18. 'field' => array(
  19. 'handler' => 'views_handler_field',
  20. 'click sortable' => TRUE,
  21. ),
  22. 'sort' => array(
  23. 'handler' => 'views_handler_sort',
  24. ),
  25. 'filter' => array(
  26. 'handler' => 'views_handler_filter_string',
  27. ),
  28. 'argument' => array(
  29. 'handler' => 'views_handler_argument_string',
  30. ),
  31. );
  32. $data['go_count_organism']['cvterm_id'] = array(
  33. 'title' => t('cvterm_id numeric field'),
  34. 'help' => t(' numeric field.'),
  35. 'field' => array(
  36. 'handler' => 'views_handler_field_numeric',
  37. 'click sortable' => TRUE,
  38. ),
  39. 'filter' => array(
  40. 'handler' => 'views_handler_filter_numeric',
  41. ),
  42. 'sort' => array(
  43. 'handler' => 'views_handler_sort',
  44. ),
  45. );
  46. $data['go_count_organism']['organism_id'] = array(
  47. 'title' => t('organism_id numeric field'),
  48. 'help' => t(' numeric field.'),
  49. 'field' => array(
  50. 'handler' => 'views_handler_field_numeric',
  51. 'click sortable' => TRUE,
  52. ),
  53. 'filter' => array(
  54. 'handler' => 'views_handler_filter_numeric',
  55. ),
  56. 'sort' => array(
  57. 'handler' => 'views_handler_sort',
  58. ),
  59. );
  60. $data['go_count_organism']['feature_count'] = array(
  61. 'title' => t('feature_count numeric field'),
  62. 'help' => t(' numeric field.'),
  63. 'field' => array(
  64. 'handler' => 'views_handler_field_numeric',
  65. 'click sortable' => TRUE,
  66. ),
  67. 'filter' => array(
  68. 'handler' => 'views_handler_filter_numeric',
  69. ),
  70. 'sort' => array(
  71. 'handler' => 'views_handler_sort',
  72. ),
  73. );
  74. $data['go_count_organism']['table']['join']['biomaterialprop'] = array(
  75. 'left_field' => 'biomaterialprop_id',
  76. 'field' => 'organism_id',
  77. );
  78. /*
  79. $tvi_query = db_query('SELECT * FROM public.tripal_views_integration');
  80. //tvi = tripal_views_integration
  81. while($tvi_row = db_fetch_object($tvi_query)){
  82. //ids we'll use for queries
  83. $setup_id = $tvi_row->setup_id;
  84. $mview_id = $tvi_row->mview_id;
  85. //let's get the name of the table
  86. $mview_table = db_fetch_object(db_query("SELECT name, mv_specs FROM {tripal_mviews} WHERE mview_id = '$mview_id';"));
  87. //use name from above and description from $tvi_row
  88. $data[$mview_table->name]['table']['group'] = t($tvi_row->description);
  89. //TODO: this need to be a base table! so need logic to figure out the primary key of this table, on the fly
  90. $data[$mview_table->name]['table']['base'] = array(
  91. 'title' => t($tvi_row->name),
  92. 'help' => t($tvi_row->description), //garbage explanation for now
  93. );
  94. //let's add fields
  95. //tmj = tripal_mviews_join
  96. $tmj_query = db_query("SELECT * FROM public.tripal_mviews_join WHERE setup_id = '$setup_id'");
  97. $i = 0;
  98. while($tmj_row = db_fetch_object($tmj_query)){
  99. $column_name = $tmj_row->view_column;
  100. $handlers = db_fetch_object(db_query("SELECT handler_filter, handler_field FROM {tripal_views_handlers} WHERE setup_id = '$setup_id' AND column_name = '$column_name';"));
  101. //handlers would be used $handlers->handler_filter, $handlers->handler_field etc, thuogh may need to include new ones in this query or do select *
  102. //let's use handlers we retrieved from above
  103. $data[$mview_table->name][$tmj_row->view_column] = array(
  104. 'title' => t($tmj_row->view_column),
  105. 'help' => t("**"),
  106. 'field' => array(
  107. 'handler' => 'views_handler_field',
  108. 'click sortable' => TRUE,
  109. ),
  110. 'sort' => array(
  111. 'handler' => 'views_handler_sort',
  112. ),
  113. 'filter' => array(
  114. 'handler' => 'views_handler_filter_string',
  115. ),
  116. 'argument' => array(
  117. 'handler' => 'views_handler_argument_string',
  118. ),
  119. );
  120. //TODO: get join info here per mview field
  121. $chado_join_field = $tmj_row->chado_table_join;
  122. $chado_join_column = $tmj_row->chado_column;
  123. $join_column = $tmj_row->view_column;
  124. $data[$mview_table->name]['table']['join'] = array(
  125. // Index this array by the table name to which this table refers.
  126. // 'left_field' is the primary key in the referenced table.
  127. // 'field' is the foreign key in this table.
  128. "$chado_join_field" => array(
  129. 'left_field' => $chado_join_column,
  130. 'field' => $join_column,
  131. ),
  132. );
  133. $i++;
  134. }
  135. }
  136. */
  137. dpm("in tripal_views_integration file", 'dpm');
  138. dpm($data, 'data');
  139. return $data;
  140. }