tripal_analysis_interpro_base.tpl.php 2.3 KB

12345678910111213141516171819202122232425262728293031323334353637383940414243444546474849505152535455565758
  1. <?php
  2. $node = $variables['node'];
  3. $analysis = $variables['node']->analysis;
  4. // the description is a text field so we want to expand that
  5. $analysis = tripal_core_expand_chado_vars($analysis,'field','analysis.description');
  6. $interpro = $node->analysis->tripal_analysis_interpro;
  7. ?>
  8. <div id="tripal_analysis_interpro-base-box" class="tripal_analysis_interpro-info-box tripal-info-box">
  9. <div class="tripal_analysis_interpro-info-box-title tripal-info-box-title">Details</div>
  10. <table id="tripal_analysis_interpro-table-base" class="tripal_analysis_interpro-table tripal-table tripal-table-vert">
  11. <tr class="tripal_analysis_interpro-table-even-row tripal-table-even-row">
  12. <th>Analysis Name</th>
  13. <td><?php print $analysis->name; ?></td>
  14. </tr>
  15. <tr class="tripal_analysis_interpro-table-odd-row tripal-table-odd-row">
  16. <th nowrap>Software</th>
  17. <td><?php
  18. print $analysis->program;
  19. if($analysis->programversion){
  20. print " (" . $analysis->programversion . ")";
  21. }
  22. if($analysis->algorithm){
  23. print ". " . $analysis->algorithm;
  24. }
  25. ?>
  26. </td>
  27. </tr>
  28. <tr class="tripal_analysis_interpro-table-even-row tripal-table-even-row">
  29. <th nowrap>Source</th>
  30. <td><?php
  31. if($analysis->sourceuri){
  32. print "<a href=\"$analysis->sourceuri\">$analysis->sourcename</a>";
  33. } else {
  34. print $analysis->sourcename;
  35. }
  36. if($analysis->sourceversion){
  37. print " (" . $analysis->sourceversion . ")";
  38. }
  39. ?>
  40. </td>
  41. </tr>
  42. <tr class="tripal_analysis_interpro-table-odd-row tripal-table-odd-row">
  43. <th nowrap>Date performed</th>
  44. <td><?php print preg_replace("/^(\d+-\d+-\d+) .*/","$1",$analysis->timeexecuted); ?></td>
  45. </tr>
  46. <tr class="tripal_analysis_interpro-table-even-row tripal-table-even-row">
  47. <th nowrap>Description</th>
  48. <td><?php print $analysis->description; ?></td>
  49. </tr>
  50. <tr class="tripal_analysis_interpro-table-odd-row tripal-table-odd-row">
  51. <th nowrap>InterProScan Arguments</th>
  52. <td><?php print $interpro->interproparameters ?></td>
  53. </tr>
  54. </table>
  55. </div>