tripal_analysis_blast_base.tpl.php 2.5 KB

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  1. <?php
  2. $node = $variables['node'];
  3. $analysis = $variables['node']->analysis;
  4. $blast = $node->analysis->tripal_analysis_blast;
  5. ?>
  6. <div id="tripal_analysis_blast-base-box" class="tripal_analysis_blast-info-box tripal-info-box">
  7. <div class="tripal_analysis_blast-info-box-title tripal-info-box-title">Blast Analysis Details</div>
  8. <div class="tripal_analysis_blast-info-box-desc tripal-info-box-desc"></div>
  9. <table id="tripal_analysis_blast-table-base" class="tripal_analysis_blast-table tripal-table tripal-table-vert">
  10. <tr class="tripal_analysis_blast-table-odd-row tripal-table-even-row">
  11. <th>Analysis Name</th>
  12. <td><?php print $analysis->name; ?></td>
  13. </tr>
  14. <tr class="tripal_analysis_blast-table-odd-row tripal-table-odd-row">
  15. <th nowrap>Software</th>
  16. <td><?php
  17. print $analysis->program;
  18. if($analysis->programversion){
  19. print " (" . $analysis->programversion . ")";
  20. }
  21. if($analysis->algorithm){
  22. print ". " . $analysis->algorithm;
  23. }
  24. ?>
  25. </td>
  26. </tr>
  27. <tr class="tripal_analysis_blast-table-odd-row tripal-table-even-row">
  28. <th nowrap>Source</th>
  29. <td><?php
  30. if($analysis->sourceuri){
  31. print "<a href=\"$analysis->sourceuri\">$analysis->sourcename</a>";
  32. } else {
  33. print $analysis->sourcename;
  34. }
  35. if($analysis->sourceversion){
  36. print " (" . $analysis->sourceversion . ")";
  37. }
  38. ?>
  39. </td>
  40. </tr>
  41. <tr class="tripal_analysis_blast-table-odd-row tripal-table-odd-row">
  42. <th nowrap>Date performed</th>
  43. <td><?php print preg_replace("/^(\d+-\d+-\d+) .*/","$1",$analysis->timeexecuted); ?></td>
  44. </tr>
  45. <tr class="tripal_analysis_blast-table-odd-row tripal-table-even-row">
  46. <th nowrap>Description</th>
  47. <td><?php print $analysis->description; ?></td>
  48. </tr>
  49. <tr class="tripal_analysis_blast-table-even-row tripal-table-odd-row">
  50. <th nowrap>Database</th>
  51. <td><?php print $blast->db->name ?></td>
  52. </tr>
  53. <tr class="tripal_analysis_blast-table-even-row tripal-table-even-row">
  54. <th nowrap>Blast Arguments</th>
  55. <td><?php print $blast->blastparameters ?></td>
  56. </tr>
  57. <tr class="tripal_analysis_blast-table-odd-row tripal-table-odd-row">
  58. <th>Report</th>
  59. </tr>
  60. </table>
  61. </div>