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- <?php
- $stock = $node->stock;
- $organism = $node->stock->organism_id;
- $main_db_reference = $stock->dbxref_id;
- // expand the text fields
- $stock = chado_expand_var($stock, 'field', 'stock.description');
- $stock = chado_expand_var($stock, 'field', 'stock.uniquename'); ?>
- <div class="tripal_stock-data-block-desc tripal-data-block-desc"></div> <?php
- // the $headers array is an array of fields to use as the colum headers.
- // additional documentation can be found here
- // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
- // This table for the stock has a vertical header (down the first column)
- // so we do not provide headers here, but specify them in the $rows array below.
- $headers = [];
- // the $rows array contains an array of rows where each row is an array
- // of values for each column of the table in that row. Additional documentation
- // can be found here:
- // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
- $rows = [];
- // Stock Name
- $rows[] = [
- [
- 'data' => 'Name',
- 'header' => TRUE,
- 'width' => '20%',
- ],
- $stock->name,
- ];
- // Stock Unique Name
- $rows[] = [
- [
- 'data' => 'Stock Name',
- 'header' => TRUE,
- ],
- $stock->uniquename,
- ];
- // Stock Type
- $rows[] = [
- [
- 'data' => 'Type',
- 'header' => TRUE,
- ],
- ucwords(preg_replace('/_/', ' ', $stock->type_id->name)),
- ];
- // Organism
- $organism = $stock->organism_id->genus . " " . $stock->organism_id->species . " (" . $stock->organism_id->common_name . ")";
- if (property_exists($stock->organism_id, 'nid')) {
- $organism = l("<i>" . $stock->organism_id->genus . " " . $stock->organism_id->species . "</i> (" . $stock->organism_id->common_name . ")", "node/" . $stock->organism_id->nid, ['html' => TRUE]);
- }
- $rows[] = [
- [
- 'data' => 'Organism',
- 'header' => TRUE,
- ],
- $organism,
- ];
- // allow site admins to see the stock ID
- if (user_access('view ids')) {
- // stock ID
- $rows[] = [
- [
- 'data' => 'Stock ID',
- 'header' => TRUE,
- 'class' => 'tripal-site-admin-only-table-row',
- ],
- [
- 'data' => $stock->stock_id,
- 'class' => 'tripal-site-admin-only-table-row',
- ],
- ];
- }
- // Is Obsolete Row
- if ($stock->is_obsolete == TRUE) {
- $rows[] = [
- [
- 'data' => '<div class="tripal_stock-obsolete">This stock is obsolete</div>',
- 'colspan' => 2,
- ],
- ];
- }
- // the $table array contains the headers and rows array as well as other
- // options for controlling the display of the table. Additional
- // documentation can be found here:
- // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
- $table = [
- 'header' => $headers,
- 'rows' => $rows,
- 'attributes' => [
- 'id' => 'tripal_stock-table-base',
- 'class' => 'tripal-data-table',
- ],
- 'sticky' => FALSE,
- 'caption' => '',
- 'colgroups' => [],
- 'empty' => '',
- ];
- // once we have our table array structure defined, we call Drupal's theme_table()
- // function to generate the table.
- print theme_table($table);
- // add in the description if there is one
- if (property_exists($stock, 'description')) { ?>
- <div style="text-align: justify"><?php print $stock->description; ?></div> <?php
- }
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