tripal_core.views_default.inc 38 KB

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  1. <?php
  2. /**
  3. * @file
  4. * Describes core default views
  5. */
  6. /**
  7. * Describes core default views
  8. *
  9. * @ingroup tripal_core
  10. */
  11. function tripal_core_views_default_views() {
  12. $views = array();
  13. $view = tripal_core_admin_defaultview_jobs();
  14. $views[$view->name] = $view;
  15. $view = tripal_core_admin_defaultview_custom_tables();
  16. $views[$view->name] = $view;
  17. $view = tripal_core_admin_defaultview_mviews();
  18. $views[$view->name] = $view;
  19. return $views;
  20. }
  21. /**
  22. * Describes the jobs administration view.
  23. *
  24. * @ingroup tripal_core
  25. */
  26. function tripal_core_admin_defaultview_jobs() {
  27. $view = new view();
  28. $view->name = 'tripal_core_admin_jobs';
  29. $view->description = 'DO NOT DISABLE';
  30. $view->tag = 'tripal admin';
  31. $view->base_table = 'tripal_jobs';
  32. $view->human_name = 'Jobs Admin';
  33. $view->core = 7;
  34. $view->api_version = '3.0';
  35. $view->disabled = FALSE; /* Edit this to true to make a default view disabled initially */
  36. /* Display: Master */
  37. $handler = $view->new_display('default', 'Master', 'default');
  38. $handler->display->display_options['title'] = 'Jobs';
  39. $handler->display->display_options['use_more_always'] = FALSE;
  40. $handler->display->display_options['access']['type'] = 'none';
  41. $handler->display->display_options['cache']['type'] = 'none';
  42. $handler->display->display_options['query']['type'] = 'views_query';
  43. $handler->display->display_options['exposed_form']['type'] = 'basic';
  44. $handler->display->display_options['exposed_form']['options']['submit_button'] = 'Filter';
  45. $handler->display->display_options['pager']['type'] = 'full';
  46. $handler->display->display_options['pager']['options']['items_per_page'] = '25';
  47. $handler->display->display_options['style_plugin'] = 'table';
  48. $handler->display->display_options['style_options']['columns'] = array(
  49. 'job_id' => 'job_id',
  50. 'job_name' => 'job_name',
  51. 'submit_date' => 'submit_date',
  52. 'start_time' => 'start_time',
  53. 'end_time' => 'end_time',
  54. 'nothing' => 'nothing',
  55. 'priority' => 'priority',
  56. 'progress' => 'progress',
  57. 'status' => 'status',
  58. 'nothing_2' => 'nothing_2',
  59. 'nothing_3' => 'nothing_3',
  60. 'nothing_1' => 'nothing_1',
  61. );
  62. $handler->display->display_options['style_options']['default'] = 'job_id';
  63. $handler->display->display_options['style_options']['info'] = array(
  64. 'job_id' => array(
  65. 'sortable' => 1,
  66. 'default_sort_order' => 'desc',
  67. 'align' => '',
  68. 'separator' => '',
  69. 'empty_column' => 0,
  70. ),
  71. 'job_name' => array(
  72. 'sortable' => 1,
  73. 'default_sort_order' => 'asc',
  74. 'align' => '',
  75. 'separator' => '',
  76. 'empty_column' => 0,
  77. ),
  78. 'submit_date' => array(
  79. 'sortable' => 0,
  80. 'default_sort_order' => 'asc',
  81. 'align' => '',
  82. 'separator' => '',
  83. 'empty_column' => 0,
  84. ),
  85. 'start_time' => array(
  86. 'sortable' => 0,
  87. 'default_sort_order' => 'asc',
  88. 'align' => '',
  89. 'separator' => '',
  90. 'empty_column' => 0,
  91. ),
  92. 'end_time' => array(
  93. 'sortable' => 0,
  94. 'default_sort_order' => 'asc',
  95. 'align' => '',
  96. 'separator' => '',
  97. 'empty_column' => 0,
  98. ),
  99. 'nothing' => array(
  100. 'align' => '',
  101. 'separator' => '',
  102. 'empty_column' => 0,
  103. ),
  104. 'priority' => array(
  105. 'sortable' => 1,
  106. 'default_sort_order' => 'asc',
  107. 'align' => '',
  108. 'separator' => '',
  109. 'empty_column' => 0,
  110. ),
  111. 'progress' => array(
  112. 'sortable' => 1,
  113. 'default_sort_order' => 'asc',
  114. 'align' => '',
  115. 'separator' => '',
  116. 'empty_column' => 0,
  117. ),
  118. 'status' => array(
  119. 'sortable' => 1,
  120. 'default_sort_order' => 'asc',
  121. 'align' => '',
  122. 'separator' => '',
  123. 'empty_column' => 0,
  124. ),
  125. 'nothing_2' => array(
  126. 'align' => '',
  127. 'separator' => '',
  128. 'empty_column' => 0,
  129. ),
  130. 'nothing_3' => array(
  131. 'align' => '',
  132. 'separator' => '',
  133. 'empty_column' => 0,
  134. ),
  135. 'nothing_1' => array(
  136. 'align' => '',
  137. 'separator' => '',
  138. 'empty_column' => 0,
  139. ),
  140. );
  141. /* Header: Global: Text area */
  142. $handler->display->display_options['header']['area']['id'] = 'area';
  143. $handler->display->display_options['header']['area']['table'] = 'views';
  144. $handler->display->display_options['header']['area']['field'] = 'area';
  145. $handler->display->display_options['header']['area']['label'] = 'Description';
  146. $handler->display->display_options['header']['area']['empty'] = TRUE;
  147. $handler->display->display_options['header']['area']['content'] = '<p>Waiting jobs are executed first by priority level (the lower the number the higher the priority) and second by the order they were entered.</p>';
  148. $handler->display->display_options['header']['area']['format'] = 'filtered_html';
  149. /* Field: Tripal Jobs: Job ID */
  150. $handler->display->display_options['fields']['job_id']['id'] = 'job_id';
  151. $handler->display->display_options['fields']['job_id']['table'] = 'tripal_jobs';
  152. $handler->display->display_options['fields']['job_id']['field'] = 'job_id';
  153. $handler->display->display_options['fields']['job_id']['label'] = '';
  154. $handler->display->display_options['fields']['job_id']['element_class'] = 'extra-short-column';
  155. $handler->display->display_options['fields']['job_id']['element_label_class'] = 'extra-short-column';
  156. $handler->display->display_options['fields']['job_id']['element_label_colon'] = FALSE;
  157. $handler->display->display_options['fields']['job_id']['separator'] = '';
  158. /* Field: Tripal Jobs: Job Name */
  159. $handler->display->display_options['fields']['job_name']['id'] = 'job_name';
  160. $handler->display->display_options['fields']['job_name']['table'] = 'tripal_jobs';
  161. $handler->display->display_options['fields']['job_name']['field'] = 'job_name';
  162. $handler->display->display_options['fields']['job_name']['alter']['make_link'] = TRUE;
  163. $handler->display->display_options['fields']['job_name']['alter']['path'] = 'admin/tripal/tripal_jobs/view/[job_id]';
  164. /* Field: Tripal Jobs: Submit Date */
  165. $handler->display->display_options['fields']['submit_date']['id'] = 'submit_date';
  166. $handler->display->display_options['fields']['submit_date']['table'] = 'tripal_jobs';
  167. $handler->display->display_options['fields']['submit_date']['field'] = 'submit_date';
  168. $handler->display->display_options['fields']['submit_date']['exclude'] = TRUE;
  169. $handler->display->display_options['fields']['submit_date']['date_format'] = 'long';
  170. /* Field: Tripal Jobs: Start Time */
  171. $handler->display->display_options['fields']['start_time']['id'] = 'start_time';
  172. $handler->display->display_options['fields']['start_time']['table'] = 'tripal_jobs';
  173. $handler->display->display_options['fields']['start_time']['field'] = 'start_time';
  174. $handler->display->display_options['fields']['start_time']['exclude'] = TRUE;
  175. $handler->display->display_options['fields']['start_time']['date_format'] = 'long';
  176. /* Field: Tripal Jobs: End Time */
  177. $handler->display->display_options['fields']['end_time']['id'] = 'end_time';
  178. $handler->display->display_options['fields']['end_time']['table'] = 'tripal_jobs';
  179. $handler->display->display_options['fields']['end_time']['field'] = 'end_time';
  180. $handler->display->display_options['fields']['end_time']['exclude'] = TRUE;
  181. $handler->display->display_options['fields']['end_time']['date_format'] = 'long';
  182. /* Field: Global: Custom text */
  183. $handler->display->display_options['fields']['nothing']['id'] = 'nothing';
  184. $handler->display->display_options['fields']['nothing']['table'] = 'views';
  185. $handler->display->display_options['fields']['nothing']['field'] = 'nothing';
  186. $handler->display->display_options['fields']['nothing']['label'] = 'Dates';
  187. $handler->display->display_options['fields']['nothing']['alter']['text'] = 'Submitted: [submit_date]<br />
  188. Started: [start_time]<br />
  189. Ended: [end_time]';
  190. /* Field: Tripal Jobs: Priority */
  191. $handler->display->display_options['fields']['priority']['id'] = 'priority';
  192. $handler->display->display_options['fields']['priority']['table'] = 'tripal_jobs';
  193. $handler->display->display_options['fields']['priority']['field'] = 'priority';
  194. $handler->display->display_options['fields']['priority']['element_class'] = 'short-column';
  195. $handler->display->display_options['fields']['priority']['element_label_class'] = 'short-column';
  196. $handler->display->display_options['fields']['priority']['separator'] = '';
  197. /* Field: Tripal Jobs: Progress */
  198. $handler->display->display_options['fields']['progress']['id'] = 'progress';
  199. $handler->display->display_options['fields']['progress']['table'] = 'tripal_jobs';
  200. $handler->display->display_options['fields']['progress']['field'] = 'progress';
  201. $handler->display->display_options['fields']['progress']['element_class'] = 'short-column';
  202. $handler->display->display_options['fields']['progress']['element_label_class'] = 'short-column';
  203. $handler->display->display_options['fields']['progress']['separator'] = '';
  204. $handler->display->display_options['fields']['progress']['suffix'] = '%';
  205. /* Field: Tripal Jobs: Status */
  206. $handler->display->display_options['fields']['status']['id'] = 'status';
  207. $handler->display->display_options['fields']['status']['table'] = 'tripal_jobs';
  208. $handler->display->display_options['fields']['status']['field'] = 'status';
  209. $handler->display->display_options['fields']['status']['element_class'] = 'short-column';
  210. $handler->display->display_options['fields']['status']['element_label_class'] = 'short-column';
  211. /* Field: Global: Custom text */
  212. $handler->display->display_options['fields']['nothing_2']['id'] = 'nothing_2';
  213. $handler->display->display_options['fields']['nothing_2']['table'] = 'views';
  214. $handler->display->display_options['fields']['nothing_2']['field'] = 'nothing';
  215. $handler->display->display_options['fields']['nothing_2']['label'] = 'Re-run Link';
  216. $handler->display->display_options['fields']['nothing_2']['exclude'] = TRUE;
  217. $handler->display->display_options['fields']['nothing_2']['alter']['text'] = 'Re-run';
  218. $handler->display->display_options['fields']['nothing_2']['alter']['make_link'] = TRUE;
  219. $handler->display->display_options['fields']['nothing_2']['alter']['path'] = 'admin/tripal/tripal_jobs/rerun/[job_id]';
  220. /* Field: Global: Custom text */
  221. $handler->display->display_options['fields']['nothing_3']['id'] = 'nothing_3';
  222. $handler->display->display_options['fields']['nothing_3']['table'] = 'views';
  223. $handler->display->display_options['fields']['nothing_3']['field'] = 'nothing';
  224. $handler->display->display_options['fields']['nothing_3']['label'] = 'Cancel link';
  225. $handler->display->display_options['fields']['nothing_3']['exclude'] = TRUE;
  226. $handler->display->display_options['fields']['nothing_3']['alter']['text'] = 'Cancel';
  227. $handler->display->display_options['fields']['nothing_3']['alter']['make_link'] = TRUE;
  228. $handler->display->display_options['fields']['nothing_3']['alter']['path'] = 'admin/tripal/tripal_jobs/cancel/[job_id]';
  229. /* Field: Global: Custom text */
  230. $handler->display->display_options['fields']['nothing_1']['id'] = 'nothing_1';
  231. $handler->display->display_options['fields']['nothing_1']['table'] = 'views';
  232. $handler->display->display_options['fields']['nothing_1']['field'] = 'nothing';
  233. $handler->display->display_options['fields']['nothing_1']['label'] = 'Action';
  234. $handler->display->display_options['fields']['nothing_1']['alter']['text'] = '[nothing_2]<br />
  235. [nothing_3]';
  236. $handler->display->display_options['fields']['nothing_1']['element_class'] = 'short-column';
  237. $handler->display->display_options['fields']['nothing_1']['element_label_class'] = 'short-column';
  238. /* Filter criterion: Tripal Jobs: Job Name */
  239. $handler->display->display_options['filters']['job_name']['id'] = 'job_name';
  240. $handler->display->display_options['filters']['job_name']['table'] = 'tripal_jobs';
  241. $handler->display->display_options['filters']['job_name']['field'] = 'job_name';
  242. $handler->display->display_options['filters']['job_name']['operator'] = 'contains';
  243. $handler->display->display_options['filters']['job_name']['exposed'] = TRUE;
  244. $handler->display->display_options['filters']['job_name']['expose']['operator_id'] = 'job_name_op';
  245. $handler->display->display_options['filters']['job_name']['expose']['label'] = 'Job Name Contains';
  246. $handler->display->display_options['filters']['job_name']['expose']['operator'] = 'job_name_op';
  247. $handler->display->display_options['filters']['job_name']['expose']['identifier'] = 'job_name';
  248. $handler->display->display_options['filters']['job_name']['expose']['remember_roles'] = array(
  249. 2 => '2',
  250. 1 => 0,
  251. 3 => 0,
  252. );
  253. /* Filter criterion: Tripal Jobs: Module Name */
  254. $handler->display->display_options['filters']['modulename']['id'] = 'modulename';
  255. $handler->display->display_options['filters']['modulename']['table'] = 'tripal_jobs';
  256. $handler->display->display_options['filters']['modulename']['field'] = 'modulename';
  257. $handler->display->display_options['filters']['modulename']['exposed'] = TRUE;
  258. $handler->display->display_options['filters']['modulename']['expose']['operator_id'] = 'modulename_op';
  259. $handler->display->display_options['filters']['modulename']['expose']['label'] = 'Submitting Module';
  260. $handler->display->display_options['filters']['modulename']['expose']['operator'] = 'modulename_op';
  261. $handler->display->display_options['filters']['modulename']['expose']['identifier'] = 'modulename';
  262. $handler->display->display_options['filters']['modulename']['expose']['remember_roles'] = array(
  263. 2 => '2',
  264. 1 => 0,
  265. 3 => 0,
  266. );
  267. /* Filter criterion: Tripal Jobs: Status */
  268. $handler->display->display_options['filters']['status']['id'] = 'status';
  269. $handler->display->display_options['filters']['status']['table'] = 'tripal_jobs';
  270. $handler->display->display_options['filters']['status']['field'] = 'status';
  271. $handler->display->display_options['filters']['status']['exposed'] = TRUE;
  272. $handler->display->display_options['filters']['status']['expose']['operator_id'] = 'status_op';
  273. $handler->display->display_options['filters']['status']['expose']['label'] = 'Job Status';
  274. $handler->display->display_options['filters']['status']['expose']['operator'] = 'status_op';
  275. $handler->display->display_options['filters']['status']['expose']['identifier'] = 'status';
  276. $handler->display->display_options['filters']['status']['expose']['remember_roles'] = array(
  277. 2 => '2',
  278. 1 => 0,
  279. 3 => 0,
  280. );
  281. /* Display: Page */
  282. $handler = $view->new_display('page', 'Page', 'page');
  283. $handler->display->display_options['path'] = 'admin/tripal/tripal_jobs/jobs';
  284. $handler->display->display_options['menu']['type'] = 'default tab';
  285. $handler->display->display_options['menu']['title'] = 'Jobs';
  286. $handler->display->display_options['menu']['description'] = 'Jobs managed by Tripal';
  287. $handler->display->display_options['menu']['weight'] = '-10';
  288. $handler->display->display_options['menu']['context'] = 0;
  289. $handler->display->display_options['menu']['context_only_inline'] = 0;
  290. $handler->display->display_options['tab_options']['weight'] = '0';
  291. return $view;
  292. }
  293. /**
  294. * Describes the custom tables administration view.
  295. *
  296. * @ingroup tripal_core
  297. */
  298. function tripal_core_admin_defaultview_custom_tables() {
  299. $view = new view();
  300. $view->name = 'tripal_core_admin_custom_table';
  301. $view->description = 'DO NOT DISABLE';
  302. $view->tag = 'tripal admin';
  303. $view->base_table = 'tripal_custom_tables';
  304. $view->human_name = 'Tripal Custom Table Admin';
  305. $view->core = 7;
  306. $view->api_version = '3.0';
  307. $view->disabled = FALSE; /* Edit this to true to make a default view disabled initially */
  308. /* Display: Master */
  309. $handler = $view->new_display('default', 'Master', 'default');
  310. $handler->display->display_options['title'] = 'Custom Tables';
  311. $handler->display->display_options['use_more_always'] = FALSE;
  312. $handler->display->display_options['access']['type'] = 'none';
  313. $handler->display->display_options['cache']['type'] = 'none';
  314. $handler->display->display_options['query']['type'] = 'views_query';
  315. $handler->display->display_options['exposed_form']['type'] = 'basic';
  316. $handler->display->display_options['exposed_form']['options']['submit_button'] = 'Filter';
  317. $handler->display->display_options['pager']['type'] = 'full';
  318. $handler->display->display_options['pager']['options']['items_per_page'] = '25';
  319. $handler->display->display_options['style_plugin'] = 'table';
  320. /* Header: Global: Action Links */
  321. $handler->display->display_options['header']['action_links_area']['id'] = 'action_links_area';
  322. $handler->display->display_options['header']['action_links_area']['table'] = 'views';
  323. $handler->display->display_options['header']['action_links_area']['field'] = 'action_links_area';
  324. $handler->display->display_options['header']['action_links_area']['label'] = 'Action Links';
  325. $handler->display->display_options['header']['action_links_area']['empty'] = TRUE;
  326. $handler->display->display_options['header']['action_links_area']['link-1'] = array(
  327. 'label-1' => 'Add Custom Table',
  328. 'path-1' => 'admin/tripal/storage/chado/custom_tables/new',
  329. );
  330. $handler->display->display_options['header']['action_links_area']['link-2'] = array(
  331. 'label-2' => '',
  332. 'path-2' => '',
  333. );
  334. $handler->display->display_options['header']['action_links_area']['link-3'] = array(
  335. 'label-3' => '',
  336. 'path-3' => '',
  337. );
  338. $handler->display->display_options['header']['action_links_area']['link-4'] = array(
  339. 'label-4' => '',
  340. 'path-4' => '',
  341. );
  342. /* Field: Tripal Custom Tables: Custom Table ID */
  343. $handler->display->display_options['fields']['table_id']['id'] = 'table_id';
  344. $handler->display->display_options['fields']['table_id']['table'] = 'tripal_custom_tables';
  345. $handler->display->display_options['fields']['table_id']['field'] = 'table_id';
  346. $handler->display->display_options['fields']['table_id']['label'] = 'ID';
  347. $handler->display->display_options['fields']['table_id']['element_class'] = 'extra-short-column';
  348. $handler->display->display_options['fields']['table_id']['element_label_class'] = 'extra-short-column';
  349. $handler->display->display_options['fields']['table_id']['element_label_colon'] = FALSE;
  350. $handler->display->display_options['fields']['table_id']['separator'] = '';
  351. /* Field: Tripal Custom Tables: Table Name */
  352. $handler->display->display_options['fields']['table_name']['id'] = 'table_name';
  353. $handler->display->display_options['fields']['table_name']['table'] = 'tripal_custom_tables';
  354. $handler->display->display_options['fields']['table_name']['field'] = 'table_name';
  355. $handler->display->display_options['fields']['table_name']['label'] = 'Name';
  356. $handler->display->display_options['fields']['table_name']['alter']['make_link'] = TRUE;
  357. $handler->display->display_options['fields']['table_name']['alter']['path'] = 'admin/tripal/storage/chado/custom_tables/view/[table_id]';
  358. /* Field: Tripal Custom Tables: Materialized View ID */
  359. $handler->display->display_options['fields']['mview_id']['id'] = 'mview_id';
  360. $handler->display->display_options['fields']['mview_id']['table'] = 'tripal_custom_tables';
  361. $handler->display->display_options['fields']['mview_id']['field'] = 'mview_id';
  362. $handler->display->display_options['fields']['mview_id']['label'] = 'Is MView';
  363. $handler->display->display_options['fields']['mview_id']['alter']['alter_text'] = TRUE;
  364. $handler->display->display_options['fields']['mview_id']['alter']['text'] = 'Yes';
  365. $handler->display->display_options['fields']['mview_id']['hide_empty'] = TRUE;
  366. $handler->display->display_options['fields']['mview_id']['empty_zero'] = TRUE;
  367. /* Field: Global: Custom text */
  368. $handler->display->display_options['fields']['nothing']['id'] = 'nothing';
  369. $handler->display->display_options['fields']['nothing']['table'] = 'views';
  370. $handler->display->display_options['fields']['nothing']['field'] = 'nothing';
  371. $handler->display->display_options['fields']['nothing']['label'] = 'Edit Link';
  372. $handler->display->display_options['fields']['nothing']['exclude'] = TRUE;
  373. $handler->display->display_options['fields']['nothing']['alter']['text'] = 'Edit';
  374. $handler->display->display_options['fields']['nothing']['alter']['make_link'] = TRUE;
  375. $handler->display->display_options['fields']['nothing']['alter']['path'] = 'admin/tripal/storage/chado/custom_tables/edit/[table_id]';
  376. /* Field: Global: Custom text */
  377. $handler->display->display_options['fields']['nothing_1']['id'] = 'nothing_1';
  378. $handler->display->display_options['fields']['nothing_1']['table'] = 'views';
  379. $handler->display->display_options['fields']['nothing_1']['field'] = 'nothing';
  380. $handler->display->display_options['fields']['nothing_1']['label'] = 'Delete Link';
  381. $handler->display->display_options['fields']['nothing_1']['exclude'] = TRUE;
  382. $handler->display->display_options['fields']['nothing_1']['alter']['text'] = 'Delete';
  383. $handler->display->display_options['fields']['nothing_1']['alter']['make_link'] = TRUE;
  384. $handler->display->display_options['fields']['nothing_1']['alter']['path'] = 'admin/tripal/storage/chado/custom_tables/delete/[table_id]';
  385. /* Field: Global: Custom text */
  386. $handler->display->display_options['fields']['nothing_2']['id'] = 'nothing_2';
  387. $handler->display->display_options['fields']['nothing_2']['table'] = 'views';
  388. $handler->display->display_options['fields']['nothing_2']['field'] = 'nothing';
  389. $handler->display->display_options['fields']['nothing_2']['label'] = '';
  390. $handler->display->display_options['fields']['nothing_2']['alter']['text'] = '[nothing] [nothing_1]';
  391. $handler->display->display_options['fields']['nothing_2']['element_label_colon'] = FALSE;
  392. /* Filter criterion: Tripal Custom Tables: Table Name */
  393. $handler->display->display_options['filters']['table_name']['id'] = 'table_name';
  394. $handler->display->display_options['filters']['table_name']['table'] = 'tripal_custom_tables';
  395. $handler->display->display_options['filters']['table_name']['field'] = 'table_name';
  396. $handler->display->display_options['filters']['table_name']['exposed'] = TRUE;
  397. $handler->display->display_options['filters']['table_name']['expose']['operator_id'] = 'table_name_op';
  398. $handler->display->display_options['filters']['table_name']['expose']['label'] = 'Table Name';
  399. $handler->display->display_options['filters']['table_name']['expose']['operator'] = 'table_name_op';
  400. $handler->display->display_options['filters']['table_name']['expose']['identifier'] = 'table_name';
  401. $handler->display->display_options['filters']['table_name']['expose']['remember_roles'] = array(
  402. 2 => '2',
  403. 1 => 0,
  404. 3 => 0,
  405. );
  406. /* Display: Page */
  407. $handler = $view->new_display('page', 'Page', 'page');
  408. $handler->display->display_options['path'] = 'admin/tripal/storage/chado/custom_tables/tables';
  409. $handler->display->display_options['menu']['type'] = 'default tab';
  410. $handler->display->display_options['menu']['title'] = 'Custom Tables';
  411. $handler->display->display_options['menu']['description'] = 'A list of existing custom tables';
  412. $handler->display->display_options['menu']['weight'] = '-10';
  413. $handler->display->display_options['menu']['name'] = 'management';
  414. $handler->display->display_options['menu']['context'] = 0;
  415. $handler->display->display_options['menu']['context_only_inline'] = 0;
  416. $handler->display->display_options['tab_options']['weight'] = '0';
  417. return $view;
  418. }
  419. /**
  420. * Describes the materialized views administration view.
  421. *
  422. * @ingroup tripal_core
  423. */
  424. function tripal_core_admin_defaultview_mviews() {
  425. $view = new view();
  426. $view->name = 'tripal_core_admin_mviews';
  427. $view->description = 'DO NOT DISABLE';
  428. $view->tag = 'tripal admin';
  429. $view->base_table = 'tripal_mviews';
  430. $view->human_name = 'MView Admin';
  431. $view->core = 7;
  432. $view->api_version = '3.0';
  433. $view->disabled = FALSE; /* Edit this to true to make a default view disabled initially */
  434. /* Display: Master */
  435. $handler = $view->new_display('default', 'Master', 'default');
  436. $handler->display->display_options['title'] = 'Materialized Views';
  437. $handler->display->display_options['use_more_always'] = FALSE;
  438. $handler->display->display_options['access']['type'] = 'none';
  439. $handler->display->display_options['cache']['type'] = 'none';
  440. $handler->display->display_options['query']['type'] = 'views_query';
  441. $handler->display->display_options['exposed_form']['type'] = 'basic';
  442. $handler->display->display_options['exposed_form']['options']['submit_button'] = 'Filter';
  443. $handler->display->display_options['pager']['type'] = 'full';
  444. $handler->display->display_options['pager']['options']['items_per_page'] = '25';
  445. $handler->display->display_options['style_plugin'] = 'table';
  446. $handler->display->display_options['style_options']['columns'] = array(
  447. 'mview_id' => 'mview_id',
  448. 'name' => 'name',
  449. 'mv_table' => 'mv_table',
  450. 'comment' => 'comment',
  451. 'last_update' => 'last_update',
  452. 'status' => 'status',
  453. );
  454. $handler->display->display_options['style_options']['default'] = 'mview_id';
  455. $handler->display->display_options['style_options']['info'] = array(
  456. 'mview_id' => array(
  457. 'sortable' => 1,
  458. 'default_sort_order' => 'asc',
  459. 'align' => '',
  460. 'separator' => '',
  461. 'empty_column' => 0,
  462. ),
  463. 'name' => array(
  464. 'sortable' => 1,
  465. 'default_sort_order' => 'asc',
  466. 'align' => '',
  467. 'separator' => '',
  468. 'empty_column' => 0,
  469. ),
  470. 'mv_table' => array(
  471. 'sortable' => 1,
  472. 'default_sort_order' => 'asc',
  473. 'align' => '',
  474. 'separator' => '',
  475. 'empty_column' => 0,
  476. ),
  477. 'comment' => array(
  478. 'sortable' => 0,
  479. 'default_sort_order' => 'asc',
  480. 'align' => '',
  481. 'separator' => '',
  482. 'empty_column' => 0,
  483. ),
  484. 'last_update' => array(
  485. 'sortable' => 1,
  486. 'default_sort_order' => 'asc',
  487. 'align' => '',
  488. 'separator' => '',
  489. 'empty_column' => 0,
  490. ),
  491. 'status' => array(
  492. 'sortable' => 1,
  493. 'default_sort_order' => 'asc',
  494. 'align' => '',
  495. 'separator' => '',
  496. 'empty_column' => 0,
  497. ),
  498. );
  499. /* Header: Global: Text area */
  500. $handler->display->display_options['header']['area']['id'] = 'area';
  501. $handler->display->display_options['header']['area']['table'] = 'views';
  502. $handler->display->display_options['header']['area']['field'] = 'area';
  503. $handler->display->display_options['header']['area']['label'] = 'Description';
  504. $handler->display->display_options['header']['area']['empty'] = TRUE;
  505. $handler->display->display_options['header']['area']['content'] = '<p>Materialized Views (MViews) are custom tables populated with a defined SQL statement. Because Chado is highly normalized and highly constrained it serves as a wonderful data storage platform, but unfortunately some queries may be slow. MViews alleviate slowness by aggregating data into tables that are more easy to query. Use MViews to create tables for custom search pages or custom Tripal module development.</p>
  506. <p>MViews behaves in the following way:</p>
  507. <ul>
  508. <li>The SQL statement defined for an MVIEW will be used to populate the table</li>
  509. <li>Altering the table structure of an MView will cause the MView table to be dropped and recreated. All records in the MView will be lost.</li>
  510. <li>Altering the query of an existing view will not change the MView table. No records will be lost.</li>
  511. <li>Repopulating an MView that is already populated will result in replacement of all records.</li>
  512. <li>A database transaction will be used when populating MViews. Therefore replacement of records does not occur until the query completes. Any search forms or pages dependent on the MView will continue to function.</li>
  513. </ul>';
  514. $handler->display->display_options['header']['area']['format'] = 'full_html';
  515. /* Header: Global: Action Links */
  516. $handler->display->display_options['header']['action_links_area']['id'] = 'action_links_area';
  517. $handler->display->display_options['header']['action_links_area']['table'] = 'views';
  518. $handler->display->display_options['header']['action_links_area']['field'] = 'action_links_area';
  519. $handler->display->display_options['header']['action_links_area']['label'] = 'Action Links';
  520. $handler->display->display_options['header']['action_links_area']['link-1'] = array(
  521. 'label-1' => 'Add Materialized View',
  522. 'path-1' => 'admin/tripal/storage/chado/mviews/new',
  523. );
  524. $handler->display->display_options['header']['action_links_area']['link-2'] = array(
  525. 'label-2' => '',
  526. 'path-2' => '',
  527. );
  528. $handler->display->display_options['header']['action_links_area']['link-3'] = array(
  529. 'label-3' => '',
  530. 'path-3' => '',
  531. );
  532. $handler->display->display_options['header']['action_links_area']['link-4'] = array(
  533. 'label-4' => '',
  534. 'path-4' => '',
  535. );
  536. /* Field: Tripal Materialized Views: Materialized View ID */
  537. $handler->display->display_options['fields']['mview_id']['id'] = 'mview_id';
  538. $handler->display->display_options['fields']['mview_id']['table'] = 'tripal_mviews';
  539. $handler->display->display_options['fields']['mview_id']['field'] = 'mview_id';
  540. $handler->display->display_options['fields']['mview_id']['label'] = '';
  541. $handler->display->display_options['fields']['mview_id']['element_class'] = 'extra-short-column';
  542. $handler->display->display_options['fields']['mview_id']['element_label_class'] = 'extra-short-column';
  543. $handler->display->display_options['fields']['mview_id']['element_label_colon'] = FALSE;
  544. $handler->display->display_options['fields']['mview_id']['separator'] = '';
  545. /* Field: Tripal Materialized Views: Name */
  546. $handler->display->display_options['fields']['name']['id'] = 'name';
  547. $handler->display->display_options['fields']['name']['table'] = 'tripal_mviews';
  548. $handler->display->display_options['fields']['name']['field'] = 'name';
  549. $handler->display->display_options['fields']['name']['alter']['make_link'] = TRUE;
  550. $handler->display->display_options['fields']['name']['alter']['path'] = 'admin/tripal/storage/chado/mviews/report/[mview_id]';
  551. /* Field: Tripal Materialized Views: Table */
  552. $handler->display->display_options['fields']['mv_table']['id'] = 'mv_table';
  553. $handler->display->display_options['fields']['mv_table']['table'] = 'tripal_mviews';
  554. $handler->display->display_options['fields']['mv_table']['field'] = 'mv_table';
  555. $handler->display->display_options['fields']['mv_table']['label'] = 'Table Name';
  556. /* Field: Tripal Materialized Views: Description */
  557. $handler->display->display_options['fields']['comment']['id'] = 'comment';
  558. $handler->display->display_options['fields']['comment']['table'] = 'tripal_mviews';
  559. $handler->display->display_options['fields']['comment']['field'] = 'comment';
  560. /* Field: Tripal Materialized Views: Updated */
  561. $handler->display->display_options['fields']['last_update']['id'] = 'last_update';
  562. $handler->display->display_options['fields']['last_update']['table'] = 'tripal_mviews';
  563. $handler->display->display_options['fields']['last_update']['field'] = 'last_update';
  564. $handler->display->display_options['fields']['last_update']['label'] = 'Last Updated';
  565. $handler->display->display_options['fields']['last_update']['date_format'] = 'long';
  566. /* Field: Tripal Materialized Views: Status */
  567. $handler->display->display_options['fields']['status']['id'] = 'status';
  568. $handler->display->display_options['fields']['status']['table'] = 'tripal_mviews';
  569. $handler->display->display_options['fields']['status']['field'] = 'status';
  570. $handler->display->display_options['fields']['status']['empty'] = 'Not yet populated';
  571. /* Field: Global: Custom text */
  572. $handler->display->display_options['fields']['nothing']['id'] = 'nothing';
  573. $handler->display->display_options['fields']['nothing']['table'] = 'views';
  574. $handler->display->display_options['fields']['nothing']['field'] = 'nothing';
  575. $handler->display->display_options['fields']['nothing']['label'] = 'Edit Link';
  576. $handler->display->display_options['fields']['nothing']['exclude'] = TRUE;
  577. $handler->display->display_options['fields']['nothing']['alter']['text'] = 'Edit';
  578. $handler->display->display_options['fields']['nothing']['alter']['make_link'] = TRUE;
  579. $handler->display->display_options['fields']['nothing']['alter']['path'] = 'admin/tripal/storage/chado/mviews/edit/[mview_id]';
  580. /* Field: Global: Custom text */
  581. $handler->display->display_options['fields']['nothing_1']['id'] = 'nothing_1';
  582. $handler->display->display_options['fields']['nothing_1']['table'] = 'views';
  583. $handler->display->display_options['fields']['nothing_1']['field'] = 'nothing';
  584. $handler->display->display_options['fields']['nothing_1']['label'] = 'Delete Link';
  585. $handler->display->display_options['fields']['nothing_1']['exclude'] = TRUE;
  586. $handler->display->display_options['fields']['nothing_1']['alter']['text'] = 'Delete';
  587. $handler->display->display_options['fields']['nothing_1']['alter']['make_link'] = TRUE;
  588. $handler->display->display_options['fields']['nothing_1']['alter']['path'] = 'admin/tripal/storage/chado/mviews/delete/[mview_id]';
  589. /* Field: Global: Custom text */
  590. $handler->display->display_options['fields']['nothing_2']['id'] = 'nothing_2';
  591. $handler->display->display_options['fields']['nothing_2']['table'] = 'views';
  592. $handler->display->display_options['fields']['nothing_2']['field'] = 'nothing';
  593. $handler->display->display_options['fields']['nothing_2']['label'] = 'Populate Link';
  594. $handler->display->display_options['fields']['nothing_2']['exclude'] = TRUE;
  595. $handler->display->display_options['fields']['nothing_2']['alter']['text'] = 'Populate';
  596. $handler->display->display_options['fields']['nothing_2']['alter']['make_link'] = TRUE;
  597. $handler->display->display_options['fields']['nothing_2']['alter']['path'] = 'admin/tripal/storage/chado/mviews/update/[mview_id]';
  598. /* Field: Global: Custom text */
  599. $handler->display->display_options['fields']['nothing_3']['id'] = 'nothing_3';
  600. $handler->display->display_options['fields']['nothing_3']['table'] = 'views';
  601. $handler->display->display_options['fields']['nothing_3']['field'] = 'nothing';
  602. $handler->display->display_options['fields']['nothing_3']['label'] = '';
  603. $handler->display->display_options['fields']['nothing_3']['alter']['text'] = '[nothing] [nothing_1]<br />
  604. [nothing_2]';
  605. $handler->display->display_options['fields']['nothing_3']['element_class'] = 'short-column';
  606. $handler->display->display_options['fields']['nothing_3']['element_label_class'] = 'short-column';
  607. $handler->display->display_options['fields']['nothing_3']['element_label_colon'] = FALSE;
  608. /* Filter criterion: Tripal Materialized Views: Name */
  609. $handler->display->display_options['filters']['name']['id'] = 'name';
  610. $handler->display->display_options['filters']['name']['table'] = 'tripal_mviews';
  611. $handler->display->display_options['filters']['name']['field'] = 'name';
  612. $handler->display->display_options['filters']['name']['group'] = 1;
  613. $handler->display->display_options['filters']['name']['exposed'] = TRUE;
  614. $handler->display->display_options['filters']['name']['expose']['operator_id'] = 'name_op';
  615. $handler->display->display_options['filters']['name']['expose']['label'] = 'Name';
  616. $handler->display->display_options['filters']['name']['expose']['operator'] = 'name_op';
  617. $handler->display->display_options['filters']['name']['expose']['identifier'] = 'name';
  618. $handler->display->display_options['filters']['name']['expose']['remember_roles'] = array(
  619. 2 => '2',
  620. 1 => 0,
  621. 3 => 0,
  622. );
  623. /* Filter criterion: Tripal Materialized Views: Table */
  624. $handler->display->display_options['filters']['mv_table']['id'] = 'mv_table';
  625. $handler->display->display_options['filters']['mv_table']['table'] = 'tripal_mviews';
  626. $handler->display->display_options['filters']['mv_table']['field'] = 'mv_table';
  627. $handler->display->display_options['filters']['mv_table']['group'] = 1;
  628. $handler->display->display_options['filters']['mv_table']['exposed'] = TRUE;
  629. $handler->display->display_options['filters']['mv_table']['expose']['operator_id'] = 'mv_table_op';
  630. $handler->display->display_options['filters']['mv_table']['expose']['label'] = 'Table Name';
  631. $handler->display->display_options['filters']['mv_table']['expose']['operator'] = 'mv_table_op';
  632. $handler->display->display_options['filters']['mv_table']['expose']['identifier'] = 'mv_table';
  633. $handler->display->display_options['filters']['mv_table']['expose']['remember_roles'] = array(
  634. 2 => '2',
  635. 1 => 0,
  636. 3 => 0,
  637. );
  638. /* Filter criterion: Tripal Materialized Views: Module Name */
  639. $handler->display->display_options['filters']['modulename']['id'] = 'modulename';
  640. $handler->display->display_options['filters']['modulename']['table'] = 'tripal_mviews';
  641. $handler->display->display_options['filters']['modulename']['field'] = 'modulename';
  642. $handler->display->display_options['filters']['modulename']['group'] = 1;
  643. $handler->display->display_options['filters']['modulename']['exposed'] = TRUE;
  644. $handler->display->display_options['filters']['modulename']['expose']['operator_id'] = 'modulename_op';
  645. $handler->display->display_options['filters']['modulename']['expose']['label'] = 'Module';
  646. $handler->display->display_options['filters']['modulename']['expose']['operator'] = 'modulename_op';
  647. $handler->display->display_options['filters']['modulename']['expose']['identifier'] = 'modulename';
  648. $handler->display->display_options['filters']['modulename']['expose']['remember_roles'] = array(
  649. 2 => '2',
  650. 1 => 0,
  651. 3 => 0,
  652. );
  653. /* Filter criterion: Tripal Materialized Views: Status */
  654. $handler->display->display_options['filters']['status']['id'] = 'status';
  655. $handler->display->display_options['filters']['status']['table'] = 'tripal_mviews';
  656. $handler->display->display_options['filters']['status']['field'] = 'status';
  657. $handler->display->display_options['filters']['status']['group'] = 1;
  658. $handler->display->display_options['filters']['status']['exposed'] = TRUE;
  659. $handler->display->display_options['filters']['status']['expose']['operator_id'] = 'status_op';
  660. $handler->display->display_options['filters']['status']['expose']['label'] = 'Status';
  661. $handler->display->display_options['filters']['status']['expose']['operator'] = 'status_op';
  662. $handler->display->display_options['filters']['status']['expose']['identifier'] = 'status';
  663. $handler->display->display_options['filters']['status']['expose']['remember_roles'] = array(
  664. 2 => '2',
  665. 1 => 0,
  666. 3 => 0,
  667. );
  668. /* Display: Page */
  669. $handler = $view->new_display('page', 'Page', 'page');
  670. $handler->display->display_options['path'] = 'admin/tripal/storage/chado/mviews/mviews';
  671. $handler->display->display_options['menu']['type'] = 'default tab';
  672. $handler->display->display_options['menu']['title'] = 'Materialized Views';
  673. $handler->display->display_options['menu']['description'] = 'a list of mviews';
  674. $handler->display->display_options['menu']['weight'] = '-10';
  675. $handler->display->display_options['menu']['name'] = 'management';
  676. $handler->display->display_options['menu']['context'] = 0;
  677. $handler->display->display_options['menu']['context_only_inline'] = 0;
  678. $handler->display->display_options['tab_options']['weight'] = '0';
  679. return $view;
  680. }