tripal/legacy/tripal_core/theme/templates/node--chado-generic.tpl.php

<?php
if ($teaser) {
  print render($content);
}
else {
  $node_type = $node->type; ?>

    <script type="text/javascript">
        // We do not use Drupal Behaviors because we do not want this
        // code to be executed on AJAX callbacks. This code only needs to
        // be executed once the page is ready.
        jQuery(document).ready(function ($) {

            // Hide all but the first data pane
            $(".tripal-data-pane").hide().filter(":first-child").show();

            // When a title in the table of contents is clicked, then
            // show the corresponding item in the details box
            $(".tripal_toc_list_item_link").click(function () {
                var id = $(this).attr('id') + "-tripal-data-pane";
                $(".tripal-data-pane").hide().filter("#" + id).fadeIn('fast');
                return false;
            });

            // If a ?pane= is specified in the URL then we want to show the
            // requested content pane. For previous version of Tripal,
            // ?block=, was used.  We support it here for backwards
            // compatibility
            var pane;
            pane = window.location.href.match(/[\?|\&]pane=(.+?)[\&|\#]/)
            if (pane == null) {
                pane = window.location.href.match(/[\?|\&]pane=(.+)/)
            }
            // if we don't have a pane then try the old style ?block=
            if (pane == null) {
                pane = window.location.href.match(/[\?|\&]block=(.+?)[\&|\#]/)
                if (pane == null) {
                    pane = window.location.href.match(/[\?|\&]block=(.+)/)
                }
            }
            if (pane != null) {
                $(".tripal-data-pane").hide().filter("#" + pane[1] + "-tripal-data-pane").show();
            }
            // Remove the 'active' class from the links section, as it doesn't
            // make sense for this layout
            $("a.active").removeClass('active');
        });
    </script>

    <div id="tripal_<?php print $node_type ?>_contents" class="tripal-contents">
        <table id="tripal-<?php print $node_type ?>-contents-table"
               class="tripal-contents-table">
            <tr class="tripal-contents-table-tr">
                <td nowrap
                    class="tripal-contents-table-td tripal-contents-table-td-toc"
                    align="left"><?php

                  // print the table of contents. It's found in the content array
                  if (array_key_exists('tripal_toc', $content)) {
                    print $content['tripal_toc']['#markup'];

                    // we may want to add the links portion of the contents to the sidebar
                    //print render($content['links']);

                    // remove the table of contents and links so thye doent show up in the
                    // data section when the rest of the $content array is rendered
                    unset($content['tripal_toc']);
                    unset($content['links']);
                  } ?>

                </td>
                <td class="tripal-contents-table-td-data" align="left"
                    width="100%"> <?php

                  // print the rendered content
                  print render($content); ?>
                </td>
            </tr>
        </table>
    </div> <?php
}