tripal/base/tripal_views_integration/tripal_views_integration.module

<?php

require_once 'includes/tripal_views_integration.admin.inc';

/**
 *
 * @ingroup tripal_views_integration
 */
function tripal_views_integration_menu(){
	$items = array();

   $items['admin/tripal/tripal_views_integration'] = array(
     'title' => t('Views Integration'),
     'description' => 'Basic Description of Tripal Views Integration Module',
     'page callback' => 'tripal_views_integration_module_description_page',
     'access arguments' => array('administer site configuration'),
     'type' => MENU_NORMAL_ITEM,
   );

	$items['admin/tripal/tripal_views_integration/list'] = array(
    'title' => t('List of Integrated Views'),
    'description' => t('Tripal Views Setups settings page, allows you to select and create materialized views and chado tables to use for searches.'),
    'page callback' => 'drupal_get_form',
    'page arguments' => array('tripal_views_integration_admin_form'),
    'access arguments' => array('manage tripal_views_integration'),
    'type' => MENU_NORMAL_ITEM,
	);

	//page to actually create setup->mview->chado table relationships
	$items['admin/tripal/tripal_views_integration/new'] = array(
     'title' => 'Views Integration',
     'page callback' => 'drupal_get_form',
     'page arguments' => array('tripal_views_integration_new_setup_form'),
     'access arguments' => array('manage tripal_views_integration'), //TODO: figure out the proper permissions arguments
     'type' => MENU_NORMAL_ITEM,
	);

	return $items;
}
/**
 *  Set the permission types that the chado module uses.  Essentially we
 *  want permissionis that protect creation, editing and deleting of chado
 *  data objects
 *
 * @ingroup tripal_views_integration
 */
function tripal_views_integration_perm(){
   return array(
      'manage tripal_views_integration',
   );
}
/**
 *
 * @ingroup tripal_views_integration
 */
function tripal_views_integration_theme(){
	$theme = array();

	$theme['tripal_views_integration_new_setup_form'] = array(
      'arguments' => array('form' => NULL),
      'template'  => 'tripal_views_integration_fields_form',
	);

	return $theme;
}