tripal/tripal_stock/theme/node--chado-stock.tpl.php

<?php
// Purpose: This template provides the layout of the stock node (page)
//   using the same templates used for the various stock content blocks.
//
// To Customize the Stock Node Page:
//   - This Template: customize basic layout and which elements are included
//   - Using Panels: Override the node page using Panels3 and place the blocks
//       of content as you please. This method requires no programming. See
//       the Tripal User Guide for more details
//   - Block Templates: customize the content/layout of each block of stock
//       content. These templates are found in the tripal_stock subdirectory
//
// Variables Available:
//   - $node: a standard object which contains all the fields associated with
//       nodes including nid, type, title, taxonomy. It also includes stock
//       specific fields such as stock_name, uniquename, stock_type, synonyms,
//       properties, db_references, object_relationships, subject_relationships,
//       organism, etc.
//   NOTE: For a full listing of fields available in the node object the
//       print_r $node line below or install the Drupal Devel module which
//       provides an extra tab at the top of the node page labelled Devel

$stock = $variables['node']->stock;

// get the template settings
$template_settings = theme_get_setting('tripal');

// toggle the sidebar if desired
$no_sidebar = 0;
if (is_array($template_settings['tripal_no_sidebar']) and
   $template_settings['tripal_no_sidebar']['stock']) {
  $no_sidebar = 1;
}

if ($teaser) {
  //print theme('tripal_stock_teaser',$node);
}
else { ?>

<div id="tripal_stock_details" class="tripal_details">

  <!-- Base Theme -->
  <?php //print theme('tripal_stock_base',$node); ?>

  <!-- Cross References -->
  <?php //print theme('tripal_stock_references',$node); ?>

  <!-- Properties -->
  <?php //print theme('tripal_stock_properties',$node); ?>

  <!-- Synonyms -->
  <?php //print theme('tripal_stock_synonyms',$node); ?>

  <!-- Relationships -->
  <?php //print theme('tripal_stock_relationships',$node); ?>

  <!-- Stock Collections -->
  <?php //print theme('tripal_stock_collections',$node); ?>

  <!-- Stock Genotypes -->
  <?php //print theme('tripal_stock_genotypes',$node); ?>

  <!-- Resource Blocks CCK elements --><?php
  /**
  for($i = 0; $i < count($node->field_resource_titles); $i++){
    if($node->field_resource_titles[$i]['value']){ ?>
      <div id="tripal_stock-resource_<?php print $i?>-box" class="tripal_stock-info-box tripal-info-box">
        <div class="tripal_stock-info-box-title tripal-info-box-title"><?php print $node->field_resource_titles[$i]['value'] ?></div>
        <?php print $node->field_resource_blocks[$i]['value']; ?>
      </div><?php
    }
  }*/?>

  <!-- Let modules add more content -->
	<?php print $content; ?>
</div>

<!-- Table of contents -->
<div id="tripal_stock_toc" class="tripal_toc">
   <div id="tripal_stock_toc_title" class="tripal_toc_title">Resources</div>
   <span id="tripal_stock_toc_desc" class="tripal_toc_desc"></span>
   <ul id="tripal_stock_toc_list" class="tripal_toc_list">

     <!-- Resource Links CCK elements --><?php
     /**
     for($i = 0; $i < count($node->field_resource_links); $i++){
       if($node->field_resource_links[$i]['value']){
         $matches = preg_split("/\|/",$node->field_resource_links[$i]['value']);?>
         <li><a href="<?php print $matches[1] ?>" target="_blank"><?php print $matches[0] ?></a></li><?php
       }
     }*/?>

     <?php // ADD CUSTOMIZED <li> LINKS HERE ?>
   </ul>
</div>
<?php } ?>