tripal_genetic.views_default.inc 8.3 KB

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  1. <?php
  2. /**
  3. * @file
  4. * Describe default genetic views
  5. */
  6. /**
  7. * Implements hook_views_default_views().
  8. *
  9. * @ingroup tripal_genetic
  10. */
  11. function tripal_genetic_views_default_views() {
  12. $views = array();
  13. // User View ("Search Biological Content")
  14. // Remember, if you change the name/path of this view,
  15. // you also want to change it's description in tripal_genetic_search_biological_data_views()
  16. $view = tripal_genetic_defaultvalue_user_genotypes();
  17. $view = tripal_make_view_compatible_with_external($view);
  18. $views[$view->name] = $view;
  19. // Admin view
  20. $view = tripal_genetic_defaultviews_admin_genotypes();
  21. $view = tripal_make_view_compatible_with_external($view);
  22. $views[$view->name] = $view;
  23. return $views;
  24. }
  25. /**
  26. * Defines the genetic user search default view.
  27. *
  28. * @ingroup tripal_genetic
  29. */
  30. function tripal_genetic_defaultvalue_user_genotypes() {
  31. // As a shortcut, currently I am copying the admin view and then tweaking it
  32. // In thie future this should be replaced by a views export
  33. $view = tripal_genetic_defaultviews_admin_genotypes();
  34. // change some view admin stuff
  35. $view->name = 'tripal_genetic_user_genotypes';
  36. $view->human_name = 'Genotype User Search';
  37. $view->description = 'Allows users to search genotype data';
  38. $view->tag = 'tripal search';
  39. // Change the path
  40. $view->display['page_1']->display_options['path'] = 'chado/genotype';
  41. $view->display['page_1']->display_options['menu'] = array(
  42. 'type' => 'normal',
  43. 'title' => 'Genotypes',
  44. 'description' => 'Genetic variations such as SNPs, MNPs and indels.',
  45. 'weight' => '-10'
  46. );
  47. unset($view->display['page_1']->display_options['tab_options']);
  48. // Remove edit/delete node
  49. unset(
  50. $view->display['default']->display_options['fields']['delete_node'],
  51. $view->display['default']->display_options['fields']['edit_node'],
  52. $view->display['default']->display_options['fields']['nothing']
  53. );
  54. // Remove the admin action links
  55. unset($view->display['default']->display_options['header']['action_links_area']);
  56. return $view;
  57. }
  58. /**
  59. * Describes the default administration genetic view
  60. *
  61. * @ingroup tripal_genetic
  62. */
  63. function tripal_genetic_defaultviews_admin_genotypes() {
  64. $view = new view();
  65. $view->name = 'tripal_genetic_admin_genetics';
  66. $view->description = 'DO NOT DISABLE';
  67. $view->tag = 'tripal admin';
  68. $view->base_table = 'genotype';
  69. $view->human_name = 'Genotype Admin';
  70. $view->core = 7;
  71. $view->api_version = '3.0';
  72. $view->disabled = FALSE; /* Edit this to true to make a default view disabled initially */
  73. /* Display: Defaults */
  74. $handler = $view->new_display('default', 'Defaults', 'default');
  75. $handler->display->display_options['title'] = 'Genotypes Observed';
  76. $handler->display->display_options['use_more_always'] = FALSE;
  77. $handler->display->display_options['access']['type'] = 'perm';
  78. $handler->display->display_options['cache']['type'] = 'none';
  79. $handler->display->display_options['query']['type'] = 'views_query';
  80. $handler->display->display_options['exposed_form']['type'] = 'basic';
  81. $handler->display->display_options['exposed_form']['options']['submit_button'] = 'Filter';
  82. $handler->display->display_options['pager']['type'] = 'full';
  83. $handler->display->display_options['pager']['options']['items_per_page'] = '25';
  84. $handler->display->display_options['pager']['options']['offset'] = '0';
  85. $handler->display->display_options['pager']['options']['id'] = '0';
  86. $handler->display->display_options['pager']['options']['quantity'] = '9';
  87. $handler->display->display_options['style_plugin'] = 'table';
  88. $handler->display->display_options['style_options']['grouping'] = '';
  89. $handler->display->display_options['style_options']['columns'] = array(
  90. 'uniquename' => 'uniquename',
  91. 'name' => 'name',
  92. 'description' => 'description',
  93. );
  94. $handler->display->display_options['style_options']['default'] = 'uniquename';
  95. $handler->display->display_options['style_options']['info'] = array(
  96. 'uniquename' => array(
  97. 'sortable' => 1,
  98. 'separator' => '',
  99. ),
  100. 'name' => array(
  101. 'sortable' => 1,
  102. 'separator' => '',
  103. ),
  104. 'description' => array(
  105. 'sortable' => 1,
  106. 'separator' => '',
  107. ),
  108. );
  109. /* No results behavior: Global: Text area */
  110. $handler->display->display_options['empty']['text']['id'] = 'area';
  111. $handler->display->display_options['empty']['text']['table'] = 'views';
  112. $handler->display->display_options['empty']['text']['field'] = 'area';
  113. $handler->display->display_options['empty']['text']['content'] = 'No genotypes match the current criteria.';
  114. $handler->display->display_options['empty']['text']['format'] = '2';
  115. /* Field: Chado Genotype: Uniquename */
  116. $handler->display->display_options['fields']['uniquename']['id'] = 'uniquename';
  117. $handler->display->display_options['fields']['uniquename']['table'] = 'genotype';
  118. $handler->display->display_options['fields']['uniquename']['field'] = 'uniquename';
  119. /* Field: Chado Genotype: Name */
  120. $handler->display->display_options['fields']['name']['id'] = 'name';
  121. $handler->display->display_options['fields']['name']['table'] = 'genotype';
  122. $handler->display->display_options['fields']['name']['field'] = 'name';
  123. /* Field: Chado Genotype: Description */
  124. $handler->display->display_options['fields']['description']['id'] = 'description';
  125. $handler->display->display_options['fields']['description']['table'] = 'genotype';
  126. $handler->display->display_options['fields']['description']['field'] = 'description';
  127. /* Filter criterion: Chado Genotype: Uniquename */
  128. $handler->display->display_options['filters']['uniquename']['id'] = 'uniquename';
  129. $handler->display->display_options['filters']['uniquename']['table'] = 'genotype';
  130. $handler->display->display_options['filters']['uniquename']['field'] = 'uniquename';
  131. $handler->display->display_options['filters']['uniquename']['operator'] = 'contains';
  132. $handler->display->display_options['filters']['uniquename']['group'] = '0';
  133. $handler->display->display_options['filters']['uniquename']['exposed'] = TRUE;
  134. $handler->display->display_options['filters']['uniquename']['expose']['operator_id'] = 'uniquename_op';
  135. $handler->display->display_options['filters']['uniquename']['expose']['label'] = 'Unique Name Contains';
  136. $handler->display->display_options['filters']['uniquename']['expose']['operator'] = 'uniquename_op';
  137. $handler->display->display_options['filters']['uniquename']['expose']['identifier'] = 'uniquename';
  138. $handler->display->display_options['filters']['uniquename']['expose']['remember_roles'] = array(
  139. 2 => '2',
  140. 1 => 0,
  141. 3 => 0,
  142. );
  143. /* Filter criterion: Chado Genotype: Description */
  144. $handler->display->display_options['filters']['description']['id'] = 'description';
  145. $handler->display->display_options['filters']['description']['table'] = 'genotype';
  146. $handler->display->display_options['filters']['description']['field'] = 'description';
  147. $handler->display->display_options['filters']['description']['operator'] = 'contains';
  148. $handler->display->display_options['filters']['description']['group'] = '0';
  149. $handler->display->display_options['filters']['description']['exposed'] = TRUE;
  150. $handler->display->display_options['filters']['description']['expose']['operator_id'] = 'description_op';
  151. $handler->display->display_options['filters']['description']['expose']['label'] = 'Description Contains';
  152. $handler->display->display_options['filters']['description']['expose']['operator'] = 'description_op';
  153. $handler->display->display_options['filters']['description']['expose']['identifier'] = 'description';
  154. $handler->display->display_options['filters']['description']['expose']['remember_roles'] = array(
  155. 2 => '2',
  156. 1 => 0,
  157. 3 => 0,
  158. );
  159. /* Display: Page */
  160. $handler = $view->new_display('page', 'Page', 'page_1');
  161. $handler->display->display_options['path'] = 'admin/tripal/chado/tripal_genetic/genotypes';
  162. $handler->display->display_options['menu']['type'] = 'default tab';
  163. $handler->display->display_options['menu']['title'] = 'Genotypes';
  164. $handler->display->display_options['menu']['description'] = 'A genotype is defined by a collection of features, mutations, etc.';
  165. $handler->display->display_options['menu']['weight'] = '-10';
  166. $handler->display->display_options['menu']['context'] = 0;
  167. $handler->display->display_options['menu']['context_only_inline'] = 0;
  168. $handler->display->display_options['tab_options']['weight'] = '0';
  169. return $view;
  170. }