tripal_library.views_default.inc 15 KB

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  1. <?php
  2. /**
  3. * @file
  4. * Describes library default views
  5. */
  6. /**
  7. * Implements hook_views_default_views().
  8. *
  9. * @ingroup tripal_library
  10. */
  11. function tripal_library_views_default_views() {
  12. $views = array();
  13. // User View ("Search Biological Content")
  14. // Remember, if you change the name/path of this view,
  15. // you also want to change it's description in tripal_library_search_biological_data_views()
  16. $view = tripal_library_defaultvalue_user_library();
  17. $view = tripal_make_view_compatible_with_external($view);
  18. $views[$view->name] = $view;
  19. // Admin view
  20. $view = tripal_library_admin_defaultviews_library();
  21. $view = tripal_make_view_compatible_with_external($view);
  22. $views[$view->name] = $view;
  23. return $views;
  24. }
  25. /**
  26. * Defines the library user search default view.
  27. *
  28. * @ingroup tripal_library
  29. */
  30. function tripal_library_defaultvalue_user_library() {
  31. // As a shortcut, currently I am copying the admin view and then tweaking it
  32. // In thie future this should be replaced by a views export
  33. $view = tripal_library_admin_defaultviews_library();
  34. // change some view admin stuff
  35. $view->name = 'tripal_library_user_library';
  36. $view->human_name = 'Library User Search';
  37. $view->description = 'Allows users to search library data';
  38. $view->tag = 'tripal search';
  39. // Change the path
  40. $view->display['page_1']->display_options['path'] = 'chado/library';
  41. $view->display['page_1']->display_options['menu'] = array(
  42. 'type' => 'normal',
  43. 'title' => 'Libraries',
  44. 'description' => 'Biological library including BAC, cDNA, FOSMID, etc.',
  45. 'weight' => '-10'
  46. );
  47. unset($view->display['page_1']->display_options['tab_options']);
  48. // Change the permission
  49. $view->display['default']->display_options['access']['perm'] = 'access chado_library content';
  50. // Remove edit/delete node
  51. unset(
  52. $view->display['default']->display_options['fields']['delete_node'],
  53. $view->display['default']->display_options['fields']['edit_node'],
  54. $view->display['default']->display_options['fields']['nothing']
  55. );
  56. // Remove the admin action links
  57. unset($view->display['default']->display_options['header']['action_links_area']);
  58. return $view;
  59. }
  60. /**
  61. * Default administration library view
  62. *
  63. * @ingroup tripal_library
  64. */
  65. function tripal_library_admin_defaultviews_library() {
  66. $view = new view();
  67. $view->name = 'tripal_library_admin_libraries';
  68. $view->description = 'DO NOT DISABLE';
  69. $view->tag = 'tripal admin';
  70. $view->base_table = 'library';
  71. $view->human_name = 'Library Admin';
  72. $view->core = 0;
  73. $view->api_version = '3.0';
  74. $view->disabled = FALSE; /* Edit this to true to make a default view disabled initially */
  75. /* Display: Defaults */
  76. $handler = $view->new_display('default', 'Defaults', 'default');
  77. $handler->display->display_options['title'] = 'Libraries';
  78. $handler->display->display_options['use_more_always'] = FALSE;
  79. $handler->display->display_options['access']['type'] = 'perm';
  80. $handler->display->display_options['access']['perm'] = 'access chado_library content';
  81. $handler->display->display_options['cache']['type'] = 'none';
  82. $handler->display->display_options['query']['type'] = 'views_query';
  83. $handler->display->display_options['exposed_form']['type'] = 'basic';
  84. $handler->display->display_options['pager']['type'] = 'full';
  85. $handler->display->display_options['pager']['options']['items_per_page'] = '25';
  86. $handler->display->display_options['pager']['options']['offset'] = '0';
  87. $handler->display->display_options['pager']['options']['id'] = '0';
  88. $handler->display->display_options['pager']['options']['quantity'] = '9';
  89. $handler->display->display_options['style_plugin'] = 'table';
  90. $handler->display->display_options['style_options']['grouping'] = '';
  91. $handler->display->display_options['style_options']['columns'] = array(
  92. 'uniquename' => 'uniquename',
  93. 'name_1' => 'name_1',
  94. 'common_name' => 'common_name',
  95. 'name' => 'name',
  96. 'is_obsolete' => 'is_obsolete',
  97. );
  98. $handler->display->display_options['style_options']['default'] = 'uniquename';
  99. $handler->display->display_options['style_options']['info'] = array(
  100. 'uniquename' => array(
  101. 'sortable' => 1,
  102. 'separator' => '',
  103. ),
  104. 'name_1' => array(
  105. 'sortable' => 1,
  106. 'separator' => '',
  107. ),
  108. 'common_name' => array(
  109. 'sortable' => 1,
  110. 'separator' => '',
  111. ),
  112. 'name' => array(
  113. 'sortable' => 1,
  114. 'separator' => '',
  115. ),
  116. 'is_obsolete' => array(
  117. 'sortable' => 1,
  118. 'separator' => '',
  119. ),
  120. );
  121. /* Header: Global: Action Links */
  122. $handler->display->display_options['header']['action_links_area']['id'] = 'action_links_area';
  123. $handler->display->display_options['header']['action_links_area']['table'] = 'views';
  124. $handler->display->display_options['header']['action_links_area']['field'] = 'action_links_area';
  125. $handler->display->display_options['header']['action_links_area']['label'] = 'Action Links';
  126. $handler->display->display_options['header']['action_links_area']['empty'] = TRUE;
  127. $handler->display->display_options['header']['action_links_area']['link-1'] = array(
  128. 'label-1' => 'Add Library',
  129. 'path-1' => 'node/add/tripal-library',
  130. );
  131. $handler->display->display_options['header']['action_links_area']['link-2'] = array(
  132. 'label-2' => '',
  133. 'path-2' => '',
  134. );
  135. $handler->display->display_options['header']['action_links_area']['link-3'] = array(
  136. 'label-3' => '',
  137. 'path-3' => '',
  138. );
  139. $handler->display->display_options['header']['action_links_area']['link-4'] = array(
  140. 'label-4' => '',
  141. 'path-4' => '',
  142. );
  143. /* No results behavior: Global: Text area */
  144. $handler->display->display_options['empty']['text']['id'] = 'area';
  145. $handler->display->display_options['empty']['text']['table'] = 'views';
  146. $handler->display->display_options['empty']['text']['field'] = 'area';
  147. $handler->display->display_options['empty']['text']['content'] = 'No libraries match the supplied criteria.';
  148. $handler->display->display_options['empty']['text']['format'] = '1';
  149. /* Relationship: Library: Library => Node */
  150. $handler->display->display_options['relationships']['library_id']['id'] = 'library_id';
  151. $handler->display->display_options['relationships']['library_id']['table'] = 'chado_library';
  152. $handler->display->display_options['relationships']['library_id']['field'] = 'library_id';
  153. /* Field: Content: Nid */
  154. $handler->display->display_options['fields']['nid']['id'] = 'nid';
  155. $handler->display->display_options['fields']['nid']['table'] = 'node';
  156. $handler->display->display_options['fields']['nid']['field'] = 'nid';
  157. $handler->display->display_options['fields']['nid']['relationship'] = 'library_id';
  158. $handler->display->display_options['fields']['nid']['exclude'] = TRUE;
  159. /* Field: Node URL */
  160. $handler->display->display_options['fields']['nid_1']['id'] = 'nid_1';
  161. $handler->display->display_options['fields']['nid_1']['table'] = 'node';
  162. $handler->display->display_options['fields']['nid_1']['field'] = 'nid';
  163. $handler->display->display_options['fields']['nid_1']['relationship'] = 'feature_id';
  164. $handler->display->display_options['fields']['nid_1']['ui_name'] = 'Node URL';
  165. $handler->display->display_options['fields']['nid_1']['label'] = '';
  166. $handler->display->display_options['fields']['nid_1']['exclude'] = TRUE;
  167. $handler->display->display_options['fields']['nid_1']['alter']['alter_text'] = TRUE;
  168. $handler->display->display_options['fields']['nid_1']['alter']['text'] = 'node/[nid]';
  169. $handler->display->display_options['fields']['nid_1']['element_label_colon'] = FALSE;
  170. /* Field: Chado Library: Uniquename */
  171. $handler->display->display_options['fields']['uniquename']['id'] = 'uniquename';
  172. $handler->display->display_options['fields']['uniquename']['table'] = 'library';
  173. $handler->display->display_options['fields']['uniquename']['field'] = 'uniquename';
  174. $handler->display->display_options['fields']['uniquename']['label'] = 'Unique Name';
  175. $handler->display->display_options['fields']['uniquename']['alter']['make_link'] = TRUE;
  176. $handler->display->display_options['fields']['uniquename']['alter']['path'] = '[nid_1]';
  177. /* Field: Chado Library: Name */
  178. $handler->display->display_options['fields']['name_1']['id'] = 'name_1';
  179. $handler->display->display_options['fields']['name_1']['table'] = 'library';
  180. $handler->display->display_options['fields']['name_1']['field'] = 'name';
  181. $handler->display->display_options['fields']['name']['alter']['make_link'] = TRUE;
  182. $handler->display->display_options['fields']['name']['alter']['path'] = '[nid_1]';
  183. /* Field: Chado Organism: Common Name */
  184. $handler->display->display_options['fields']['common_name']['id'] = 'common_name';
  185. $handler->display->display_options['fields']['common_name']['table'] = 'organism';
  186. $handler->display->display_options['fields']['common_name']['field'] = 'common_name';
  187. $handler->display->display_options['fields']['common_name']['label'] = 'Organism';
  188. /* Field: Chado Cvterm: Name */
  189. $handler->display->display_options['fields']['name']['id'] = 'name';
  190. $handler->display->display_options['fields']['name']['table'] = 'cvterm';
  191. $handler->display->display_options['fields']['name']['field'] = 'name';
  192. $handler->display->display_options['fields']['name']['label'] = 'Type';
  193. /* Field: Chado Library: Is Obsolete */
  194. $handler->display->display_options['fields']['is_obsolete']['id'] = 'is_obsolete';
  195. $handler->display->display_options['fields']['is_obsolete']['table'] = 'library';
  196. $handler->display->display_options['fields']['is_obsolete']['field'] = 'is_obsolete';
  197. $handler->display->display_options['fields']['is_obsolete']['label'] = 'Obsolete?';
  198. $handler->display->display_options['fields']['is_obsolete']['alter']['alter_text'] = TRUE;
  199. $handler->display->display_options['fields']['is_obsolete']['alter']['text'] = 'Yes';
  200. $handler->display->display_options['fields']['is_obsolete']['empty'] = 'No';
  201. $handler->display->display_options['fields']['is_obsolete']['empty_zero'] = TRUE;
  202. $handler->display->display_options['fields']['is_obsolete']['separator'] = '';
  203. /* Field: Content: Delete link */
  204. $handler->display->display_options['fields']['delete_node']['id'] = 'delete_node';
  205. $handler->display->display_options['fields']['delete_node']['table'] = 'views_entity_node';
  206. $handler->display->display_options['fields']['delete_node']['field'] = 'delete_node';
  207. $handler->display->display_options['fields']['delete_node']['relationship'] = 'library_id';
  208. $handler->display->display_options['fields']['delete_node']['exclude'] = TRUE;
  209. /* Field: Content: Edit link */
  210. $handler->display->display_options['fields']['edit_node']['id'] = 'edit_node';
  211. $handler->display->display_options['fields']['edit_node']['table'] = 'views_entity_node';
  212. $handler->display->display_options['fields']['edit_node']['field'] = 'edit_node';
  213. $handler->display->display_options['fields']['edit_node']['relationship'] = 'library_id';
  214. $handler->display->display_options['fields']['edit_node']['exclude'] = TRUE;
  215. /* Field: Global: Custom text */
  216. $handler->display->display_options['fields']['nothing']['id'] = 'nothing';
  217. $handler->display->display_options['fields']['nothing']['table'] = 'views';
  218. $handler->display->display_options['fields']['nothing']['field'] = 'nothing';
  219. $handler->display->display_options['fields']['nothing']['label'] = '';
  220. $handler->display->display_options['fields']['nothing']['alter']['text'] = '[edit_node] [delete_node]';
  221. $handler->display->display_options['fields']['nothing']['element_label_colon'] = FALSE;
  222. /* Sort criterion: Chado Library: Name */
  223. $handler->display->display_options['sorts']['name']['id'] = 'name';
  224. $handler->display->display_options['sorts']['name']['table'] = 'library';
  225. $handler->display->display_options['sorts']['name']['field'] = 'name';
  226. /* Filter criterion: Chado Organism: Common Name */
  227. $handler->display->display_options['filters']['common_name']['id'] = 'common_name';
  228. $handler->display->display_options['filters']['common_name']['table'] = 'organism';
  229. $handler->display->display_options['filters']['common_name']['field'] = 'common_name';
  230. $handler->display->display_options['filters']['common_name']['value'] = 'All';
  231. $handler->display->display_options['filters']['common_name']['group'] = '0';
  232. $handler->display->display_options['filters']['common_name']['exposed'] = TRUE;
  233. $handler->display->display_options['filters']['common_name']['expose']['operator_id'] = 'common_name_op';
  234. $handler->display->display_options['filters']['common_name']['expose']['label'] = 'Organism';
  235. $handler->display->display_options['filters']['common_name']['expose']['operator'] = 'common_name_op';
  236. $handler->display->display_options['filters']['common_name']['expose']['identifier'] = 'organism_common_name';
  237. $handler->display->display_options['filters']['common_name']['expose']['remember_roles'] = array(
  238. 2 => '2',
  239. 1 => 0,
  240. 3 => 0,
  241. );
  242. /* Filter criterion: Chado Library: Type Id */
  243. $handler->display->display_options['filters']['type_id']['id'] = 'type_id';
  244. $handler->display->display_options['filters']['type_id']['table'] = 'library';
  245. $handler->display->display_options['filters']['type_id']['field'] = 'type_id';
  246. $handler->display->display_options['filters']['type_id']['value'] = 'All';
  247. $handler->display->display_options['filters']['type_id']['group'] = '0';
  248. $handler->display->display_options['filters']['type_id']['exposed'] = TRUE;
  249. $handler->display->display_options['filters']['type_id']['expose']['operator_id'] = 'type_id_op';
  250. $handler->display->display_options['filters']['type_id']['expose']['label'] = 'Type';
  251. $handler->display->display_options['filters']['type_id']['expose']['operator'] = 'type_id_op';
  252. $handler->display->display_options['filters']['type_id']['expose']['identifier'] = 'type_id';
  253. $handler->display->display_options['filters']['type_id']['expose']['remember_roles'] = array(
  254. 2 => '2',
  255. 1 => 0,
  256. 3 => 0,
  257. );
  258. /** MANUALLY ADD since filter handler no exporting correctly */
  259. $handler->display->display_options['filters']['common_name']['expose']['values_form_type'] = 'select';
  260. $handler->display->display_options['filters']['common_name']['expose']['select_multiple'] = FALSE;
  261. $handler->display->display_options['filters']['common_name']['expose']['select_optional'] = TRUE;
  262. $handler->display->display_options['filters']['common_name']['expose']['max_length'] = 40;
  263. /* Display: Page */
  264. $handler = $view->new_display('page', 'Page', 'page_1');
  265. $handler->display->display_options['path'] = 'admin/tripal/chado/tripal_library/libraries';
  266. $handler->display->display_options['menu']['type'] = 'default tab';
  267. $handler->display->display_options['menu']['title'] = 'Libraries';
  268. $handler->display->display_options['menu']['description'] = 'A library is a collection of features of a given type. For example, a cDNA or BAC clone library.';
  269. $handler->display->display_options['menu']['weight'] = '0';
  270. $handler->display->display_options['menu']['name'] = 'management';
  271. $handler->display->display_options['menu']['context'] = 0;
  272. $handler->display->display_options['menu']['context_only_inline'] = 0;
  273. $handler->display->display_options['tab_options']['weight'] = '0';
  274. /** MANUALLY ADD since filter handler no exporting correctly
  275. $handler->display->display_options['filters']['common_name']['expose']['values_form_type'] = 'select';
  276. $handler->display->display_options['filters']['common_name']['expose']['select_multiple'] = FALSE;
  277. $handler->display->display_options['filters']['common_name']['expose']['select_optional'] = TRUE;
  278. $handler->display->display_options['filters']['common_name']['expose']['max_length'] = 40;
  279. */
  280. return $view;
  281. }