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@@ -12,9 +12,12 @@ env:
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before_script:
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- docker pull statonlab/tripal3
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-
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+ - wget ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.30/ncbi-blast-2.2.30+-x64-linux.tar.gz
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+ - tar xzf ncbi-blast-2.2.30+-x64-linux.tar.gz
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script:
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- docker run -it -d --rm --name tripal -v "$(pwd)":/modules/tripal_blast statonlab/tripal3
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- sleep 30 # We pause here so postgres and apache complete booting up
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+ #install blast
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+ - docker exec -it tripal bash -c "cp /modules/tripal_blast/ncbi-blast-2.2.30+/bin/* /usr/local/bin"
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- docker exec -it tripal drush pm-enable -y blast_ui
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- docker exec -it tripal bash -c "cd /modules/tripal_blast && composer install && DRUPAL_ROOT=/var/www/html ./vendor/bin/phpunit"
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