 Robb, Sofia
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fc2ebeee35
correcting coords
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7 gadi atpakaļ |
 E.Cannon
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cf449a8b40
Code reformatted preparatory to later changes
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7 gadi atpakaļ |
 Nick Booher
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3ec13a5e7a
Show download links when result file is large
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8 gadi atpakaļ |
 Lacey Sanderson
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9558927bb7
Limited number of results shown to reduce WSOD shown to users and added empty option to max_target_seq options.
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8 gadi atpakaļ |
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Lacey Sanderson
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5aa0345c1c
Fixed small bug with file download paths
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8 gadi atpakaļ |
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Lacey Sanderson
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0f0e12be4a
Changed blast report to ensure download files exist before providing link.
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8 gadi atpakaļ |
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Robb, Sofia
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ae29adc97a
added link to GFF file
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8 gadi atpakaļ |
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Lacey Sanderson
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2328da24cc
Updated custom linkouts to return an already rendered link. This avoids a potential url-encoding bug
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9 gadi atpakaļ |
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E.Cannon
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6a260f4cc8
Merged Lacey's changes
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9 gadi atpakaļ |
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Lacey Sanderson
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75023fa46c
Removed the double load of the blast results page since it seems to be unnecessary.
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9 gadi atpakaļ |
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Lacey Sanderson
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0b2634c085
Added db storage of blast job details and cleaned up different implementations previously storing data (edit & resubmit used drupal variables and recent jobs used session) to use the new database saved details.
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9 gadi atpakaļ |
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Lacey Sanderson
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86753a3f57
Consolidated original link-outs with the work done by Peanutbase/LegumeInfo; Debugged JBrowse/GBrowse link-outs and made the code more readable.
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9 gadi atpakaļ |
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Lacey Sanderson
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729bc7069e
Cleaned up the code for displaying blast jobs to improve readability including add in documentation for both the visualization and link-out functionality.
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9 gadi atpakaļ |
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Lacey Sanderson
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402bb1f00d
Redid the job_id encoding to make the URLs prettier while still obfuscating it so researchers are not tempted to look at blast results not their own...
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9 gadi atpakaļ |
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Lacey Sanderson
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844bc1b784
fixed resubmit link target
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9 gadi atpakaļ |
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Lacey Sanderson
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e2339248f7
Changes to the blast report page including clean-up of the hit vis. code
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9 gadi atpakaļ |
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Lacey Sanderson
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d4a441473f
A couple of bug fixes and reformating of the recent jobs display into an easy to read table.
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9 gadi atpakaļ |
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E.Cannon
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0a91799184
Uses get_recent_jobs()
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9 gadi atpakaļ |
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E.Cannon
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5ee0c63cd8
Removed debug statements
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9 gadi atpakaļ |
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E.Cannon
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9a2925db2e
Modified linkout handling to accommodate custom linkouts
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9 gadi atpakaļ |
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E.Cannon
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69b34a6d42
Restored orginal functionality of GBrowse linkouts
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9 gadi atpakaļ |
 Ethy Cannon
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94b811a995
re-restored linkout functionality
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9 gadi atpakaļ |
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Ethy Cannon
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0616ac9200
Intermediate checkin; many repairs to advanced options
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9 gadi atpakaļ |
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E.Cannon
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c3d0095adc
Reformatted results page, added hit visualization
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9 gadi atpakaļ |
 Deepak Bitragunta
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5dbaac381f
Edit-Resubmit and recent jobs funcitonality added. Also, improvements on the output page
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10 gadi atpakaļ |
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Deepak Bitragunta
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2d90f992af
Code changes done for BLAST visualization and minor bugs & enhancements
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10 gadi atpakaļ |
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Lacey Sanderson
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f394fc20bd
Issue #2356593: Added the ability to link to GBrowse/JBrowse instances. Furthermore, added hook_blast_linkout_info() to allow other developers to create their own complex link types
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10 gadi atpakaļ |
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Lacey Sanderson
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17900b1fc2
Amended 'no results' message to exist outside the table and be highlighted in red. This solution did take into account that multiple query seq. might have been submitted with only some not having hits in which case a comma-separated list of those without hits is shown.
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10 gadi atpakaļ |
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Lacey Sanderson
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4e5bdd9c2f
Fixed some bugs releated to link-outs and added configuration for target upload.
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10 gadi atpakaļ |
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Lacey Sanderson
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b87c9d28d6
Added link-out functionality
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10 gadi atpakaļ |
