 Lacey Sanderson
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e568f76371
Merge branch '7.x-1.x' of git.drupal.org:project/tripal_blast into 7.x-1.x
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%!s(int64=10) %!d(string=hai) anos |
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Lacey Sanderson
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f0ac24a22c
Bug Fix: If users uploaded query files with spaces, the blast command would fail b/c of too many arguements; added quotes around query filename to fix this.
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%!s(int64=10) %!d(string=hai) anos |
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Lacey Sanderson
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df1774453c
Bug Fix: in blastdb_load tried to access directly when needed to access [->nid]
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%!s(int64=10) %!d(string=hai) anos |
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Lacey Sanderson
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df2829b0d5
Merge branch '7.x-1.x' of git.drupal.org:project/tripal_blast into 7.x-1.x
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Lacey Sanderson
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4e9e01b387
Removed system information from blast node page
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Lacey Sanderson
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b0156ade42
Small bug fix
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Lacey Sanderson
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c98a732929
Cleaning up hidden files created by Mac that were accidentally commited
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Lacey Sanderson
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0ca91becb2
Added help & configure links to module
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%!s(int64=10) %!d(string=hai) anos |
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Lacey Sanderson
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c174b0eb47
Fixed alignment display to be 60 residues/line
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%!s(int64=10) %!d(string=hai) anos |
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Lacey Sanderson
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7e13fb71f7
Issue #2332755: Sort external database options
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Lacey Sanderson
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1e311ada78
Issue #2332761: Fixed link to add databases in blastdb node add/edit form
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Lacey Sanderson
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dab82cbaed
Updated to be include the original blast_ui module in the new tripal_blast project
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Lacey Sanderson
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01a47faf75
fixed a few typo's
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Lacey Sanderson
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e93e589573
Fixed BLAST Path configuration to work if no path is selected.
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Lacey Sanderson
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a506426f65
Re-introducted Deepak's changes
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Lacey Sanderson
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307ca829c5
Added README
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Lacey Sanderson
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17900b1fc2
Amended 'no results' message to exist outside the table and be highlighted in red. This solution did take into account that multiple query seq. might have been submitted with only some not having hits in which case a comma-separated list of those without hits is shown.
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Lacey Sanderson
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4e5bdd9c2f
Fixed some bugs releated to link-outs and added configuration for target upload.
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Lacey Sanderson
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b87c9d28d6
Added link-out functionality
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%!s(int64=10) %!d(string=hai) anos |
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Lacey Sanderson
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30d3911339
Added interface for configuring Link-outs. Still doesn't actually link out in BLAST results.
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Lacey Sanderson
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ec260c7170
Updated get blast database API function to respect node access to that we can use any node access module to restrict the blast databases available :) Tested & works with Simple Access
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Lacey Sanderson
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437d1a202c
Set page refresh on BLAST result page
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Lacey Sanderson
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b063c68c1f
Changes to the BLASTDB node so that it displays it's data on the node page & saves the new more readable db type
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Lacey Sanderson
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feeaeb6d40
Added E-value & max sequence advanced options for blastx & tblastn so it felt like we actually support them ;)
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Lacey Sanderson
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9d08f308f5
Added better launchpad pages
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Lacey Sanderson
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2e64e6f2d9
Re-factored BLAST submission form for code-reuse
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%!s(int64=10) %!d(string=hai) anos |
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Lacey Sanderson
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782630ed4c
Re-factored BLAST submission form for code-reuse
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%!s(int64=10) %!d(string=hai) anos |
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Lacey Sanderson
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531e8b9c26
Added admin UI to set example sequences
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%!s(int64=10) %!d(string=hai) anos |
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Lacey Sanderson
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b338b09fc1
Merge branch 'master' of git.drupal.org:sandbox/amirmhzadeh/2237115
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Lacey Sanderson
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b465dbb777
Changed example sequence button to checkbox & added in varible for administrator to set the example sequence (UI not yet implemented)
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