 E.Cannon
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63e992090a
Don't show warning unless there is warning text to display
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7 years ago |
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E.Cannon
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3d8b1ac6c2
Use Drupal warning theme
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7 years ago |
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E.Cannon
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579d49f305
Moved blast_ui_get_cvit_conf_text() and blast_ui_get_cvit_conf() from blast_ui.admin.inc to blast_ui.api.inc
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7 years ago |
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E.Cannon
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7a942496b6
Moved new parameter to linkout function () to array, to avoid breaking existing customized linkout functions.
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7 years ago |
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E.Cannon
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dca6681071
Restored proper handling of CGI parameters to GBrowse
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7 years ago |
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E.Cannon
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8b397443e9
Passes regex to user-defined linkout function
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7 years ago |
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E.Cannon
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a1c2406b21
Fixed an 'undefined variable' notice
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7 years ago |
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E.Cannon
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5257c9c640
Added temporary instruction to fix hard-coded path in blast_ui-config.js
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7 years ago |
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E.Cannon
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6fe470cee1
Another attempt to fix missing cvitjs_enabled field in
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7 years ago |
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E.Cannon
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734d301968
Removes all nodes of type 'Blast Database' when module is uninstalled
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7 years ago |
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E.Cannon
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bf5a473a5e
Moved code to retrieve nodes of type 'Blast Database' into a separate function, get_blast_database_nodes()
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7 years ago |
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E.Cannon
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abf880bb78
Creates cvitjs_enabled field in if it doesn't exist ... when updating too.
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7 years ago |
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E.Cannon
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7cf227f698
Creates cvitjs_enabled field in if it doesn't exist
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7 years ago |
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E.Cannon
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95b28c9221
Check for existing blastjob record added to get_recent_blast_jobs()
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7 years ago |
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E.Cannon
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025c0dc30e
No longer assumes that blast jobs saved in the session object are also in the blastjob table
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7 years ago |
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E.Cannon
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680f9580a1
Added blastdb field cvitjs_enabled to the blastdb schema too
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7 years ago |
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E.Cannon
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98045f824f
More refinements to CViTjs instructions
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7 years ago |
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E.Cannon
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ec11d37e8e
Removed warning caused by stray mention of 'qRange'
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7 years ago |
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E.Cannon
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81f7ea6ab1
Altered order of CViTjs steps
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7 years ago |
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E.Cannon
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b01d919321
Fixed 'cvitjs_enable' vs 'cvitjs_enabled' confusion
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7 years ago |
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E.Cannon
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6848545f63
merged with upstread repository
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7 years ago |
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E.Cannon
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812a8885e8
Added style for warning text
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7 years ago |
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E.Cannon
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5ccbb2d906
Removed debug statement
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7 years ago |
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E.Cannon
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c1e1471033
Improved help text for genome visualization
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7 years ago |
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E.Cannon
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d7fad49906
Added warning text block.
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7 years ago |
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E.Cannon
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e73c29bad7
Added ability to set a temporary warning message on the BLAST input form and clarified description of CViTjs conf file.
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7 years ago |
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E.Cannon
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d710da3659
Don't need cvitjs_config field in blastdb table
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7 years ago |
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E.Cannon
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4cc3b6a8f0
Added placeholder for warning text
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7 years ago |
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E.Cannon
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c6c5de5ad2
Fixed bug in gap handling and removed culling_limit
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7 years ago |
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E.Cannon
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9a2e308f10
Added CViTj support
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7 years ago |
