 Lacey Sanderson
|
408cacb63f
Switch cvitjs to use the libraries api.
|
6 роки тому |
|
Lacey Sanderson
|
0b2634c085
Added db storage of blast job details and cleaned up different implementations previously storing data (edit & resubmit used drupal variables and recent jobs used session) to use the new database saved details.
|
9 роки тому |
|
Lacey Sanderson
|
86753a3f57
Consolidated original link-outs with the work done by Peanutbase/LegumeInfo; Debugged JBrowse/GBrowse link-outs and made the code more readable.
|
9 роки тому |
|
Lacey Sanderson
|
402bb1f00d
Redid the job_id encoding to make the URLs prettier while still obfuscating it so researchers are not tempted to look at blast results not their own...
|
9 роки тому |
|
Lacey Sanderson
|
d4a441473f
A couple of bug fixes and reformating of the recent jobs display into an easy to read table.
|
9 роки тому |
 E.Cannon
|
4b8dfd21ae
Added code to start web services
|
9 роки тому |
|
E.Cannon
|
364887db6d
Includes file for custom linkout handling
|
9 роки тому |
|
E.Cannon
|
f2705c7173
removed hard-coded example; now uses example set in module configuration as it should
|
9 роки тому |
|
E.Cannon
|
f61b6eecb0
Had to comment-out linkout code for now. Need to resolve Lacey's and Deepak's approaches to linkouts for hits.
|
9 роки тому |
|
E.Cannon
|
8f9caca646
Support for using a job id
|
9 роки тому |
 Deepak Bitragunta
|
2d90f992af
Code changes done for BLAST visualization and minor bugs & enhancements
|
9 роки тому |
|
Lacey Sanderson
|
f394fc20bd
Issue #2356593: Added the ability to link to GBrowse/JBrowse instances. Furthermore, added hook_blast_linkout_info() to allow other developers to create their own complex link types
|
10 роки тому |
|
Lacey Sanderson
|
0ca91becb2
Added help & configure links to module
|
10 роки тому |
|
Lacey Sanderson
|
b063c68c1f
Changes to the BLASTDB node so that it displays it's data on the node page & saves the new more readable db type
|
10 роки тому |
|
Lacey Sanderson
|
9d08f308f5
Added better launchpad pages
|
10 роки тому |
|
Lacey Sanderson
|
2e64e6f2d9
Re-factored BLAST submission form for code-reuse
|
10 роки тому |
|
Lacey Sanderson
|
531e8b9c26
Added admin UI to set example sequences
|
10 роки тому |
|
Lacey Sanderson
|
b465dbb777
Changed example sequence button to checkbox & added in varible for administrator to set the example sequence (UI not yet implemented)
|
10 роки тому |
|
Lacey Sanderson
|
a6d80bb2ba
Switched both nucleotide and protein BLAST forms over to use Tripal jobs.
|
10 роки тому |
|
Lacey Sanderson
|
7009cadc5e
Added API which currently only includes pulling out options...
|
10 роки тому |
|
Lacey Sanderson
|
ffe0f661a9
Cleaned up documentation for upcomming collaboration :)
|
10 роки тому |
|
Lacey Sanderson
|
00b915a82d
Added protein BLAST and re-vamped the results page to be a tabular listing generated from XML
|
10 роки тому |
|
Lacey Sanderson
|
82938536b4
Fixed the hard-coded path in result display, set the title based on the database name, changed the blast command to use full path of database and sorted the blast databases by name
|
10 роки тому |
|
Lacey Sanderson
|
14601e7da4
Clean repository to fix repository issues
|
10 роки тому |
