 Lacey Sanderson
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989190ff3c
Added warning to blastdb node pages when cvitjs is enabled but there is no config.
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há 7 anos atrás |
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Lacey Sanderson
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22a0f6f85e
Add cvitjs to node view and add additional help text to node edit form.
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há 7 anos atrás |
 E.Cannon
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3d8b1ac6c2
Use Drupal warning theme
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há 7 anos atrás |
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E.Cannon
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a1c2406b21
Fixed an 'undefined variable' notice
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há 7 anos atrás |
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E.Cannon
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6fe470cee1
Another attempt to fix missing cvitjs_enabled field in
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há 7 anos atrás |
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E.Cannon
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abf880bb78
Creates cvitjs_enabled field in if it doesn't exist ... when updating too.
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há 7 anos atrás |
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E.Cannon
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7cf227f698
Creates cvitjs_enabled field in if it doesn't exist
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há 7 anos atrás |
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E.Cannon
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9a2e308f10
Added CViTj support
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há 7 anos atrás |
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Lacey Sanderson
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0d7df8ac52
Add support for custom link-outs that don't require databases or regex.
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há 9 anos atrás |
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E.Cannon
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6a260f4cc8
Merged Lacey's changes
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há 9 anos atrás |
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Lacey Sanderson
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86753a3f57
Consolidated original link-outs with the work done by Peanutbase/LegumeInfo; Debugged JBrowse/GBrowse link-outs and made the code more readable.
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há 9 anos atrás |
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Lacey Sanderson
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729bc7069e
Cleaned up the code for displaying blast jobs to improve readability including add in documentation for both the visualization and link-out functionality.
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há 9 anos atrás |
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E.Cannon
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d4f3d064be
Added explanation for use of 'custom' linkout type
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há 9 anos atrás |
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E.Cannon
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416e71c3be
Removed all references to gbrowse_track in blastdb table and node
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há 9 anos atrás |
 Ethy Cannon
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be76f747d0
tweaks
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há 9 anos atrás |
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E.Cannon
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9973392985
Restored linkout functionality
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há 9 anos atrás |
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E.Cannon
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f61b6eecb0
Had to comment-out linkout code for now. Need to resolve Lacey's and Deepak's approaches to linkouts for hits.
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há 9 anos atrás |
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E.Cannon
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22b400fd42
Added support for GBrowse linkouts
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há 9 anos atrás |
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Lacey Sanderson
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f394fc20bd
Issue #2356593: Added the ability to link to GBrowse/JBrowse instances. Furthermore, added hook_blast_linkout_info() to allow other developers to create their own complex link types
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há 10 anos atrás |
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Lacey Sanderson
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b0156ade42
Small bug fix
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há 10 anos atrás |
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Lacey Sanderson
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7e13fb71f7
Issue #2332755: Sort external database options
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há 10 anos atrás |
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Lacey Sanderson
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1e311ada78
Issue #2332761: Fixed link to add databases in blastdb node add/edit form
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há 10 anos atrás |
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Lacey Sanderson
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4e5bdd9c2f
Fixed some bugs releated to link-outs and added configuration for target upload.
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há 10 anos atrás |
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Lacey Sanderson
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b87c9d28d6
Added link-out functionality
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há 10 anos atrás |
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Lacey Sanderson
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30d3911339
Added interface for configuring Link-outs. Still doesn't actually link out in BLAST results.
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há 10 anos atrás |
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Lacey Sanderson
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b063c68c1f
Changes to the BLASTDB node so that it displays it's data on the node page & saves the new more readable db type
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há 10 anos atrás |
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Lacey Sanderson
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ffe0f661a9
Cleaned up documentation for upcomming collaboration :)
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há 10 anos atrás |
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Lacey Sanderson
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00b915a82d
Added protein BLAST and re-vamped the results page to be a tabular listing generated from XML
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há 10 anos atrás |
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Lacey Sanderson
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82938536b4
Fixed the hard-coded path in result display, set the title based on the database name, changed the blast command to use full path of database and sorted the blast databases by name
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há 10 anos atrás |
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Lacey Sanderson
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14601e7da4
Clean repository to fix repository issues
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há 10 anos atrás |
