 E.Cannon
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a09c30124f
minor word changes
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7 tahun lalu |
 ekcannon
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e4657d8613
Merge pull request #2 from laceysanderson/cvitjs
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7 tahun lalu |
 Lacey Sanderson
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c87dfd4b85
Added helpful message to admins pointing to the CViTjs data directory.
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7 tahun lalu |
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Lacey Sanderson
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7a8f1b79f3
Switch to embedded CViTjs mode to fix themeing issues + minor adjustments to results page for better flow.
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7 tahun lalu |
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Lacey Sanderson
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80afae5e4b
Added help text for cvitjs conf files: [blast] stanza.
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7 tahun lalu |
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Lacey Sanderson
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989190ff3c
Added warning to blastdb node pages when cvitjs is enabled but there is no config.
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7 tahun lalu |
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Lacey Sanderson
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22a0f6f85e
Add cvitjs to node view and add additional help text to node edit form.
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7 tahun lalu |
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Lacey Sanderson
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0d77a87f6a
Blast admin: expand cvit fieldset when enabled and ensure path disabled when cvitjs is disabled.
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7 tahun lalu |
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Lacey Sanderson
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54a7353b5e
Moved drupal_add_js/css() into preprocess hook.
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7 tahun lalu |
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Lacey Sanderson
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911e1de8cd
Added git-ignore file so I don't accidentally commit cvitjs into blast.
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7 tahun lalu |
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E.Cannon
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63e992090a
Don't show warning unless there is warning text to display
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7 tahun lalu |
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E.Cannon
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3d8b1ac6c2
Use Drupal warning theme
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7 tahun lalu |
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E.Cannon
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579d49f305
Moved blast_ui_get_cvit_conf_text() and blast_ui_get_cvit_conf() from blast_ui.admin.inc to blast_ui.api.inc
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7 tahun lalu |
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E.Cannon
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7a942496b6
Moved new parameter to linkout function () to array, to avoid breaking existing customized linkout functions.
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7 tahun lalu |
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E.Cannon
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dca6681071
Restored proper handling of CGI parameters to GBrowse
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7 tahun lalu |
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E.Cannon
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8b397443e9
Passes regex to user-defined linkout function
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7 tahun lalu |
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E.Cannon
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a1c2406b21
Fixed an 'undefined variable' notice
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7 tahun lalu |
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E.Cannon
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5257c9c640
Added temporary instruction to fix hard-coded path in blast_ui-config.js
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7 tahun lalu |
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E.Cannon
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6fe470cee1
Another attempt to fix missing cvitjs_enabled field in
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7 tahun lalu |
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E.Cannon
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734d301968
Removes all nodes of type 'Blast Database' when module is uninstalled
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7 tahun lalu |
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E.Cannon
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bf5a473a5e
Moved code to retrieve nodes of type 'Blast Database' into a separate function, get_blast_database_nodes()
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7 tahun lalu |
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E.Cannon
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abf880bb78
Creates cvitjs_enabled field in if it doesn't exist ... when updating too.
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7 tahun lalu |
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E.Cannon
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7cf227f698
Creates cvitjs_enabled field in if it doesn't exist
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7 tahun lalu |
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E.Cannon
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95b28c9221
Check for existing blastjob record added to get_recent_blast_jobs()
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7 tahun lalu |
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E.Cannon
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025c0dc30e
No longer assumes that blast jobs saved in the session object are also in the blastjob table
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7 tahun lalu |
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E.Cannon
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680f9580a1
Added blastdb field cvitjs_enabled to the blastdb schema too
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7 tahun lalu |
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E.Cannon
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98045f824f
More refinements to CViTjs instructions
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7 tahun lalu |
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E.Cannon
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ec11d37e8e
Removed warning caused by stray mention of 'qRange'
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7 tahun lalu |
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E.Cannon
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81f7ea6ab1
Altered order of CViTjs steps
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7 tahun lalu |
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E.Cannon
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b01d919321
Fixed 'cvitjs_enable' vs 'cvitjs_enabled' confusion
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7 tahun lalu |
