 Robb, Sofia
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ae29adc97a
added link to GFF file
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9 years ago |
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Robb, Sofia
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514453cab1
added convert_tsv2gff3 function
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9 years ago |
 Lacey-Anne Sanderson
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52fa1a2294
Update blast_ui.theme.inc
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9 years ago |
 Lacey Sanderson
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2328da24cc
Updated custom linkouts to return an already rendered link. This avoids a potential url-encoding bug
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9 years ago |
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Lacey Sanderson
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0d7df8ac52
Add support for custom link-outs that don't require databases or regex.
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9 years ago |
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Lacey Sanderson
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f540948e0b
Provide a default for blast_threads so that users who upgrade don't have broken blast runs until they update their admin preferences.
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9 years ago |
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Lacey-Anne Sanderson
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eb945b0755
Merge pull request #3 from LegumeFederation/7.x-1.x
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9 years ago |
 E.Cannon
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34a5265b76
Merge branch '7.x-1.x' of https://github.com/LegumeFederation/tripal_blast into 7.x-1.x
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9 years ago |
 ekcannon
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f829a95f07
Delete .DS_Store
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9 years ago |
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ekcannon
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a7bcf1d242
Delete .DS_Store
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9 years ago |
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ekcannon
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2b7d46b43c
Delete .DS_Store
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9 years ago |
 prateekgta
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67ac714599
changes to blast admin and services
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9 years ago |
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E.Cannon
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6a260f4cc8
Merged Lacey's changes
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9 years ago |
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Lacey Sanderson
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75023fa46c
Removed the double load of the blast results page since it seems to be unnecessary.
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9 years ago |
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Lacey Sanderson
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1f3911220c
Recent jobs sorted to show most recent first.
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9 years ago |
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Lacey Sanderson
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b218a39669
Small bug fix: nucleotide query blast launchpad table of blast types was incorrect.
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9 years ago |
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Lacey Sanderson
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0b2634c085
Added db storage of blast job details and cleaned up different implementations previously storing data (edit & resubmit used drupal variables and recent jobs used session) to use the new database saved details.
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9 years ago |
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prateekgta
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490d7d9062
updated blast_ui.services.inc, remove word size 2 in option, set num_threads option in command
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9 years ago |
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E.Cannon
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3326610dd0
no newline after closing ?>
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9 years ago |
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E.Cannon
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bf0f5ab54b
No mention of uploading target sequence if disabled
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9 years ago |
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E.Cannon
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30f9fa2476
fixed a small typo
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9 years ago |
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Lacey Sanderson
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86753a3f57
Consolidated original link-outs with the work done by Peanutbase/LegumeInfo; Debugged JBrowse/GBrowse link-outs and made the code more readable.
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9 years ago |
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Lacey Sanderson
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cc5b7631ba
small fix to blast database node page to ensure if linkout not set we don't know errors and empty rows ;)
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9 years ago |
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Lacey Sanderson
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729bc7069e
Cleaned up the code for displaying blast jobs to improve readability including add in documentation for both the visualization and link-out functionality.
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9 years ago |
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Lacey Sanderson
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5c4f4e6773
Bug Fix: use is_numeric instead of is_integer...
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9 years ago |
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Lacey Sanderson
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402bb1f00d
Redid the job_id encoding to make the URLs prettier while still obfuscating it so researchers are not tempted to look at blast results not their own...
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9 years ago |
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Lacey Sanderson
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844bc1b784
fixed resubmit link target
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10 years ago |
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Lacey Sanderson
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094eb6ad54
removed debugging statements...
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10 years ago |
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Lacey Sanderson
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ec4a1cee12
Fixed submission of advanced options (broken by nesting of blast form
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10 years ago |
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Lacey Sanderson
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e2339248f7
Changes to the blast report page including clean-up of the hit vis. code
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10 years ago |
