 Robb, Sofia
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ae29adc97a
added link to GFF file
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vor 8 Jahren |
 Lacey Sanderson
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2328da24cc
Updated custom linkouts to return an already rendered link. This avoids a potential url-encoding bug
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vor 9 Jahren |
 E.Cannon
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6a260f4cc8
Merged Lacey's changes
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vor 9 Jahren |
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Lacey Sanderson
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75023fa46c
Removed the double load of the blast results page since it seems to be unnecessary.
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vor 9 Jahren |
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Lacey Sanderson
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0b2634c085
Added db storage of blast job details and cleaned up different implementations previously storing data (edit & resubmit used drupal variables and recent jobs used session) to use the new database saved details.
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vor 9 Jahren |
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Lacey Sanderson
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86753a3f57
Consolidated original link-outs with the work done by Peanutbase/LegumeInfo; Debugged JBrowse/GBrowse link-outs and made the code more readable.
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vor 9 Jahren |
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Lacey Sanderson
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729bc7069e
Cleaned up the code for displaying blast jobs to improve readability including add in documentation for both the visualization and link-out functionality.
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vor 9 Jahren |
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Lacey Sanderson
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402bb1f00d
Redid the job_id encoding to make the URLs prettier while still obfuscating it so researchers are not tempted to look at blast results not their own...
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vor 9 Jahren |
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Lacey Sanderson
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844bc1b784
fixed resubmit link target
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vor 9 Jahren |
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Lacey Sanderson
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e2339248f7
Changes to the blast report page including clean-up of the hit vis. code
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vor 9 Jahren |
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Lacey Sanderson
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d4a441473f
A couple of bug fixes and reformating of the recent jobs display into an easy to read table.
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vor 9 Jahren |
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E.Cannon
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0a91799184
Uses get_recent_jobs()
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vor 9 Jahren |
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E.Cannon
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5ee0c63cd8
Removed debug statements
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vor 9 Jahren |
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E.Cannon
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9a2925db2e
Modified linkout handling to accommodate custom linkouts
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vor 9 Jahren |
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E.Cannon
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69b34a6d42
Restored orginal functionality of GBrowse linkouts
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vor 9 Jahren |
 Ethy Cannon
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94b811a995
re-restored linkout functionality
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vor 9 Jahren |
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Ethy Cannon
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0616ac9200
Intermediate checkin; many repairs to advanced options
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vor 9 Jahren |
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E.Cannon
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c3d0095adc
Reformatted results page, added hit visualization
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vor 9 Jahren |
 Deepak Bitragunta
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5dbaac381f
Edit-Resubmit and recent jobs funcitonality added. Also, improvements on the output page
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vor 10 Jahren |
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Deepak Bitragunta
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2d90f992af
Code changes done for BLAST visualization and minor bugs & enhancements
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vor 10 Jahren |
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Lacey Sanderson
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f394fc20bd
Issue #2356593: Added the ability to link to GBrowse/JBrowse instances. Furthermore, added hook_blast_linkout_info() to allow other developers to create their own complex link types
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vor 10 Jahren |
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Lacey Sanderson
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17900b1fc2
Amended 'no results' message to exist outside the table and be highlighted in red. This solution did take into account that multiple query seq. might have been submitted with only some not having hits in which case a comma-separated list of those without hits is shown.
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vor 10 Jahren |
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Lacey Sanderson
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4e5bdd9c2f
Fixed some bugs releated to link-outs and added configuration for target upload.
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vor 10 Jahren |
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Lacey Sanderson
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b87c9d28d6
Added link-out functionality
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vor 10 Jahren |
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Lacey Sanderson
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2e64e6f2d9
Re-factored BLAST submission form for code-reuse
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vor 10 Jahren |
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Deepak Bitragunta
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992b75d4f4
Code fix to display no hits message
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vor 10 Jahren |
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Lacey Sanderson
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6cda5d80d3
Fixed BL_ORD_ID bug (Issue #2319493)
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vor 10 Jahren |
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Lacey Sanderson
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698e6182c2
Added additional download formats including HTML and TSV
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vor 10 Jahren |
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Lacey Sanderson
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a6d80bb2ba
Switched both nucleotide and protein BLAST forms over to use Tripal jobs.
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vor 10 Jahren |
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Lacey Sanderson
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ffe0f661a9
Cleaned up documentation for upcomming collaboration :)
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vor 10 Jahren |
