 Lacey Sanderson
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f0ac24a22c
Bug Fix: If users uploaded query files with spaces, the blast command would fail b/c of too many arguements; added quotes around query filename to fix this.
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hace 10 años |
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Lacey Sanderson
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df1774453c
Bug Fix: in blastdb_load tried to access directly when needed to access [->nid]
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hace 10 años |
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Lacey Sanderson
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01a47faf75
fixed a few typo's
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hace 10 años |
|
Lacey Sanderson
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e93e589573
Fixed BLAST Path configuration to work if no path is selected.
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hace 10 años |
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Lacey Sanderson
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a506426f65
Re-introducted Deepak's changes
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hace 10 años |
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Lacey Sanderson
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307ca829c5
Added README
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hace 10 años |
|
Lacey Sanderson
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17900b1fc2
Amended 'no results' message to exist outside the table and be highlighted in red. This solution did take into account that multiple query seq. might have been submitted with only some not having hits in which case a comma-separated list of those without hits is shown.
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hace 10 años |
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Lacey Sanderson
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4e5bdd9c2f
Fixed some bugs releated to link-outs and added configuration for target upload.
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hace 10 años |
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Lacey Sanderson
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b87c9d28d6
Added link-out functionality
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hace 10 años |
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Lacey Sanderson
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30d3911339
Added interface for configuring Link-outs. Still doesn't actually link out in BLAST results.
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hace 10 años |
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Lacey Sanderson
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ec260c7170
Updated get blast database API function to respect node access to that we can use any node access module to restrict the blast databases available :) Tested & works with Simple Access
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hace 10 años |
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Lacey Sanderson
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437d1a202c
Set page refresh on BLAST result page
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hace 10 años |
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Lacey Sanderson
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b063c68c1f
Changes to the BLASTDB node so that it displays it's data on the node page & saves the new more readable db type
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hace 10 años |
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Lacey Sanderson
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feeaeb6d40
Added E-value & max sequence advanced options for blastx & tblastn so it felt like we actually support them ;)
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hace 10 años |
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Lacey Sanderson
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9d08f308f5
Added better launchpad pages
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hace 10 años |
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Lacey Sanderson
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2e64e6f2d9
Re-factored BLAST submission form for code-reuse
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hace 10 años |
|
Lacey Sanderson
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782630ed4c
Re-factored BLAST submission form for code-reuse
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hace 10 años |
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Lacey Sanderson
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531e8b9c26
Added admin UI to set example sequences
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hace 10 años |
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Lacey Sanderson
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b338b09fc1
Merge branch 'master' of git.drupal.org:sandbox/amirmhzadeh/2237115
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hace 10 años |
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Lacey Sanderson
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b465dbb777
Changed example sequence button to checkbox & added in varible for administrator to set the example sequence (UI not yet implemented)
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hace 10 años |
 Deepak Bitragunta
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992b75d4f4
Code fix to display no hits message
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hace 10 años |
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Lacey Sanderson
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6cda5d80d3
Fixed BL_ORD_ID bug (Issue #2319493)
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hace 10 años |
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Lacey Sanderson
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e88a9ca153
Fixed merge conflict keeping mostly my commit but adding in the check messages for query/database not being empty.
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hace 10 años |
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Lacey Sanderson
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03657d29f9
Fixed File upload failing silently (Issue #2303901)
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hace 10 años |
|
Deepak Bitragunta
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429ad1b62b
Fixing empty field validation bug
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hace 10 años |
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Lacey Sanderson
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ed7548fc0f
Fixed Bug #2318175: Query sequence name conflict -now contains date/time
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hace 10 años |
|
deepaksomanadh
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30815e2dcf
Adding Example Sequence button to both forms
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hace 10 años |
|
Lacey Sanderson
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d6d015dec5
Added some error checking to run_BLAST_tripal_job
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hace 10 años |
|
Lacey Sanderson
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698e6182c2
Added additional download formats including HTML and TSV
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hace 10 años |
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Lacey Sanderson
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a6d80bb2ba
Switched both nucleotide and protein BLAST forms over to use Tripal jobs.
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hace 10 años |
