 Lacey Sanderson
|
0d7df8ac52
Add support for custom link-outs that don't require databases or regex.
|
%!s(int64=9) %!d(string=hai) anos |
 E.Cannon
|
6a260f4cc8
Merged Lacey's changes
|
%!s(int64=9) %!d(string=hai) anos |
|
Lacey Sanderson
|
86753a3f57
Consolidated original link-outs with the work done by Peanutbase/LegumeInfo; Debugged JBrowse/GBrowse link-outs and made the code more readable.
|
%!s(int64=9) %!d(string=hai) anos |
|
Lacey Sanderson
|
729bc7069e
Cleaned up the code for displaying blast jobs to improve readability including add in documentation for both the visualization and link-out functionality.
|
%!s(int64=9) %!d(string=hai) anos |
|
E.Cannon
|
d4f3d064be
Added explanation for use of 'custom' linkout type
|
%!s(int64=9) %!d(string=hai) anos |
|
E.Cannon
|
416e71c3be
Removed all references to gbrowse_track in blastdb table and node
|
%!s(int64=9) %!d(string=hai) anos |
 Ethy Cannon
|
be76f747d0
tweaks
|
%!s(int64=9) %!d(string=hai) anos |
|
E.Cannon
|
9973392985
Restored linkout functionality
|
%!s(int64=9) %!d(string=hai) anos |
|
E.Cannon
|
f61b6eecb0
Had to comment-out linkout code for now. Need to resolve Lacey's and Deepak's approaches to linkouts for hits.
|
%!s(int64=9) %!d(string=hai) anos |
|
E.Cannon
|
22b400fd42
Added support for GBrowse linkouts
|
%!s(int64=9) %!d(string=hai) anos |
|
Lacey Sanderson
|
f394fc20bd
Issue #2356593: Added the ability to link to GBrowse/JBrowse instances. Furthermore, added hook_blast_linkout_info() to allow other developers to create their own complex link types
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
b0156ade42
Small bug fix
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
7e13fb71f7
Issue #2332755: Sort external database options
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
1e311ada78
Issue #2332761: Fixed link to add databases in blastdb node add/edit form
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
4e5bdd9c2f
Fixed some bugs releated to link-outs and added configuration for target upload.
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
b87c9d28d6
Added link-out functionality
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
30d3911339
Added interface for configuring Link-outs. Still doesn't actually link out in BLAST results.
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
b063c68c1f
Changes to the BLASTDB node so that it displays it's data on the node page & saves the new more readable db type
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
ffe0f661a9
Cleaned up documentation for upcomming collaboration :)
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
00b915a82d
Added protein BLAST and re-vamped the results page to be a tabular listing generated from XML
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
82938536b4
Fixed the hard-coded path in result display, set the title based on the database name, changed the blast command to use full path of database and sorted the blast databases by name
|
%!s(int64=10) %!d(string=hai) anos |
|
Lacey Sanderson
|
14601e7da4
Clean repository to fix repository issues
|
%!s(int64=10) %!d(string=hai) anos |
