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- <?php
- namespace Tests;
- use StatonLab\TripalTestSuite\DBTransaction;
- use StatonLab\TripalTestSuite\TripalTestCase;
- use Faker\Factory;
- /**
- * Tests BlastDB Node CRUD
- */
- class BlastDBNodeTest extends TripalTestCase {
- // Uncomment to auto start and rollback db transactions per test method.
- use DBTransaction;
- /**
- * BlastDB Node Type exists.
- *
- * Check that the BlastDB node type exists. It should be created
- * when the module is installed by the Drupal Node API.
- */
- public function testBlastDBNodeExists() {
- // Get a list of all types available.
- $types = node_type_get_types();
- // The BlastDB node type must be in the list.
- $this->assertArrayHasKey('blastdb', $types, '"Blast Database" node type is not registered with Drupal.');
- // Additionally, the blastdb node type should be created by blast_ui.\
- // This checks the case where the node type might be created by
- // a different module.
- $this->assertEquals($types['blastdb']->module, 'blast_ui', '"Blast Database" node type was not added by blast_ui.');
- }
- /**
- * Test Creating a BlastDB Node.
- *
- * Note: We can't test this by submitting the form via PUT because it requires
- * permission to access /node/add/blastdb; however, we don't yet have a
- * way to do this with TripalTestSuite. Furthermore, testing HTTP Requests
- * would not give us access to the data added via the test due to database
- * transactions.
- */
- public function testBlastDBNodeCreate() {
- module_load_include('inc', 'node', 'node.pages');
- // Log in the god user.
- $this->actingAs(1);
- $node = array('type' => 'blastdb');
- // Fill in the form.
- $faker = Factory::create();
- $form_state = array(
- 'values' => array(
- 'db_name' => $faker->words(3, TRUE),
- 'db_path' => '/fake/path/here',
- 'db_dbtype' => 'nucleotide',
- 'dbxref_linkout_type' => 'none',
- 'cvitjs_enabled' => 0,
- 'op' => t('Save'),
- ),
- );
- // Execute the node creation form.
- drupal_form_submit('blastdb_node_form', $form_state, (object) $node);
- // Retrieve any errors.
- $errors = form_get_errors();
- // Assert that there must not be any.
- $this->assertEmpty($errors, 'Form submission returned the following errors:'.print_r($errors,TRUE));
- // Check that there is a test blast database.
- $result = db_query('SELECT * FROM {blastdb} WHERE name=:name',
- array(':name' => $form_state['values']['db_name']));
- $this->assertEquals(1, $result->rowCount(), 'Unable to select the blast database using the name.');
- }
- /**
- * Update an existing Blast Database Node.
- */
- public function testBlastDBNodeUpdate() {
- module_load_include('inc', 'node', 'node.pages');
- // Log in the god user.
- $this->actingAs(1);
- // Create the node in the first place.
- $seeder = DatabaseSeeders\BlastDBNodeSeeder::seed();
- $node = $seeder->getNode();
- // Now use the form to edit it :-)
- // Specifically, we will change the name and type.
- $faker = Factory::create();
- $form_state = array(
- 'values' => array(
- 'db_name' => $faker->words(4, TRUE),
- 'db_path' => $node->db_path,
- 'db_dbtype' => 'protein',
- 'dbxref_linkout_type' => $node->dbxref_linkout_type,
- 'cvitjs_enabled' => $node->cvitjs_enabled,
- 'op' => t('Save'),
- ),
- );
- // Execute the node creation form.
- drupal_form_submit('blastdb_node_form', $form_state, $node);
- // Retrieve any errors.
- $errors = form_get_errors();
- // Assert that there must not be any.
- $this->assertEmpty($errors, 'Form submission returned the following errors:'.print_r($errors,TRUE));
- // Check that there is a test blast database.
- $result = db_query('SELECT * FROM {blastdb} WHERE name=:name AND dbtype=:type',
- array(':name' => $form_state['values']['db_name'], ':type' => $form_state['values']['db_dbtype']));
- $this->assertEquals(1, $result->rowCount(), 'Unable to select the blast database using the new name and type.');
- }
- /**
- * Test deleting a node.
- * NOTE: We cannot test this via drupal_form_submit() since it requires a confirmation.
- */
- }
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