Citrus_sinensis-orange1.1g015632m.blastresults.html 124 KB

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  1. <HTML>
  2. <TITLE>BLAST Search Results</TITLE>
  3. <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
  4. <PRE>
  5. <b>BLASTN 2.6.0+</b>
  6. <b><a
  7. href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=R
  8. etrieve&list_uids=10890397&dopt=Citation">Reference</a>:</b>
  9. Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
  10. "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
  11. 7(1-2):203-14.
  12. Database: Citrus_sinensis-scaffold00001.fasta
  13. 1 sequences; 5,927,163 total letters
  14. <b>Query=</b> orange1.1g015632m PAC:18136217 (mRNA) Citrus sinensis
  15. Length=2075
  16. Score E
  17. Sequences producing significant alignments: (Bits) Value
  18. scaffold00001 length=5927163 <a href=#scaffold00001>848</a> 0.0
  19. >scaffold00001<a name=scaffold00001></a> length=5927163
  20. Length=5927163
  21. Score = 848 bits (441), Expect = 0.0
  22. Identities = 441/441 (100%), Gaps = 0/441 (0%)
  23. Strand=Plus/Plus
  24. Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
  25. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  26. Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
  27. Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
  28. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  29. Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
  30. Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
  31. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  32. Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
  33. Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
  34. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  35. Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
  36. Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
  37. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  38. Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
  39. Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
  40. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  41. Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
  42. Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
  43. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  44. Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
  45. Query 421 CAATTTTTTCACCCGATCGGT 441
  46. |||||||||||||||||||||
  47. Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
  48. Score = 748 bits (389), Expect = 0.0
  49. Identities = 389/389 (100%), Gaps = 0/389 (0%)
  50. Strand=Plus/Plus
  51. Query 1687 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1746
  52. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  53. Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
  54. Query 1747 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 1806
  55. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  56. Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
  57. Query 1807 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 1866
  58. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  59. Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
  60. Query 1867 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 1926
  61. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  62. Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
  63. Query 1927 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 1986
  64. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  65. Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
  66. Query 1987 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2046
  67. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  68. Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
  69. Query 2047 TTGGAAACCATATGTTGTTTTCCTCCCAC 2075
  70. |||||||||||||||||||||||||||||
  71. Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
  72. Score = 531 bits (276), Expect = 1e-150
  73. Identities = 276/276 (100%), Gaps = 0/276 (0%)
  74. Strand=Plus/Plus
  75. Query 805 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 864
  76. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  77. Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
  78. Query 865 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 924
  79. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  80. Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
  81. Query 925 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 984
  82. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  83. Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
  84. Query 985 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 1044
  85. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  86. Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
  87. Query 1045 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1080
  88. ||||||||||||||||||||||||||||||||||||
  89. Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
  90. Score = 310 bits (161), Expect = 5e-84
  91. Identities = 161/161 (100%), Gaps = 0/161 (0%)
  92. Strand=Plus/Plus
  93. Query 495 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 554
  94. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  95. Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
  96. Query 555 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 614
  97. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  98. Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
  99. Query 615 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 655
  100. |||||||||||||||||||||||||||||||||||||||||
  101. Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
  102. Score = 273 bits (142), Expect = 5e-73
  103. Identities = 142/142 (100%), Gaps = 0/142 (0%)
  104. Strand=Plus/Plus
  105. Query 1212 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1271
  106. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  107. Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
  108. Query 1272 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1331
  109. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  110. Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
  111. Query 1332 GGCTGAACTGCTACTGGGACAG 1353
  112. ||||||||||||||||||||||
  113. Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
  114. Score = 198 bits (103), Expect = 2e-50
  115. Identities = 103/103 (100%), Gaps = 0/103 (0%)
  116. Strand=Plus/Plus
  117. Query 1585 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1644
  118. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  119. Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
  120. Query 1645 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1687
  121. |||||||||||||||||||||||||||||||||||||||||||
  122. Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
  123. Score = 189 bits (98), Expect = 1e-47
  124. Identities = 98/98 (100%), Gaps = 0/98 (0%)
  125. Strand=Plus/Plus
  126. Query 1403 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1462
  127. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  128. Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
  129. Query 1463 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1500
  130. ||||||||||||||||||||||||||||||||||||||
  131. Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
  132. Score = 183 bits (95), Expect = 8e-46
  133. Identities = 95/95 (100%), Gaps = 0/95 (0%)
  134. Strand=Plus/Plus
  135. Query 653 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 712
  136. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  137. Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
  138. Query 713 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 747
  139. |||||||||||||||||||||||||||||||||||
  140. Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
  141. Score = 166 bits (86), Expect = 1e-40
  142. Identities = 86/86 (100%), Gaps = 0/86 (0%)
  143. Strand=Plus/Plus
  144. Query 1499 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1558
  145. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  146. Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
  147. Query 1559 ACTCTCCCAATCTTCGGAGCACAGCA 1584
  148. ||||||||||||||||||||||||||
  149. Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
  150. Score = 162 bits (84), Expect = 2e-39
  151. Identities = 152/186 (82%), Gaps = 0/186 (0%)
  152. Strand=Plus/Plus
  153. Query 805 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 864
  154. |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
  155. Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
  156. Query 865 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 924
  157. || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
  158. Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
  159. Query 925 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 984
  160. ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
  161. Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
  162. Query 985 GAGTAT 990
  163. ||||||
  164. Sbjct 1684360 GAGTAT 1684365
  165. Score = 154 bits (80), Expect = 4e-37
  166. Identities = 80/80 (100%), Gaps = 0/80 (0%)
  167. Strand=Plus/Plus
  168. Query 1078 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1137
  169. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  170. Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
  171. Query 1138 AAGCCTCAAAATTTACTGGT 1157
  172. ||||||||||||||||||||
  173. Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
  174. Score = 121 bits (63), Expect = 3e-27
  175. Identities = 63/63 (100%), Gaps = 0/63 (0%)
  176. Strand=Plus/Plus
  177. Query 746 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 805
  178. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  179. Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
  180. Query 806 AGG 808
  181. |||
  182. Sbjct 4059658 AGG 4059660
  183. Score = 117 bits (61), Expect = 4e-26
  184. Identities = 61/61 (100%), Gaps = 0/61 (0%)
  185. Strand=Plus/Plus
  186. Query 1155 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1214
  187. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  188. Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
  189. Query 1215 A 1215
  190. |
  191. Sbjct 4060539 A 4060539
  192. Score = 114 bits (59), Expect = 5e-25
  193. Identities = 59/59 (100%), Gaps = 0/59 (0%)
  194. Strand=Plus/Plus
  195. Query 439 GGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGATTTTGAGAGTAACCTGGT 497
  196. |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  197. Sbjct 4059018 GGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGATTTTGAGAGTAACCTGGT 4059076
  198. Score = 108 bits (56), Expect = 3e-23
  199. Identities = 56/56 (100%), Gaps = 0/56 (0%)
  200. Strand=Plus/Plus
  201. Query 1351 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1406
  202. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  203. Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
  204. Score = 87.2 bits (45), Expect = 7e-17
  205. Identities = 71/84 (85%), Gaps = 0/84 (0%)
  206. Strand=Plus/Plus
  207. Query 1417 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1476
  208. ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
  209. Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
  210. Query 1477 ATCAAAGCTCACCCGTGGCACAAG 1500
  211. || |||||||| || ||||| |||
  212. Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
  213. Score = 64.1 bits (33), Expect = 6e-10
  214. Identities = 99/132 (75%), Gaps = 0/132 (0%)
  215. Strand=Plus/Plus
  216. Query 1222 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1281
  217. ||||| || || || || || || |||||||| || | || || ||||||||||||||
  218. Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
  219. Query 1282 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1341
  220. || || || ||||| | || |||||||| ||||| || || || |||||||| ||
  221. Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
  222. Query 1342 CTACTGGGACAG 1353
  223. || || ||||||
  224. Sbjct 1685453 CTTCTTGGACAG 1685464
  225. Score = 60.3 bits (31), Expect = 9e-09
  226. Identities = 49/58 (84%), Gaps = 0/58 (0%)
  227. Strand=Plus/Plus
  228. Query 1148 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1205
  229. |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
  230. Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
  231. Score = 44.9 bits (23), Expect = 4e-04
  232. Identities = 27/29 (93%), Gaps = 0/29 (0%)
  233. Strand=Plus/Minus
  234. Query 1288 GAGTACACCGCAGCAATTGATATCTGGTC 1316
  235. ||||| || ||||||||||||||||||||
  236. Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
  237. Lambda K H
  238. 1.33 0.621 1.12
  239. Gapped
  240. Lambda K H
  241. 1.33 0.621 1.12
  242. Effective search space used: 12180278865
  243. <b>Query=</b> orange1.1g015662m PAC:18136220 (mRNA) Citrus sinensis
  244. Length=2292
  245. Score E
  246. Sequences producing significant alignments: (Bits) Value
  247. scaffold00001 length=5927163 <a href=#scaffold00001>1677</a> 0.0
  248. >scaffold00001<a name=scaffold00001></a> length=5927163
  249. Length=5927163
  250. Score = 1677 bits (872), Expect = 0.0
  251. Identities = 872/872 (100%), Gaps = 0/872 (0%)
  252. Strand=Plus/Plus
  253. Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
  254. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  255. Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
  256. Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
  257. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  258. Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
  259. Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
  260. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  261. Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
  262. Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
  263. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  264. Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
  265. Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
  266. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  267. Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
  268. Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
  269. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  270. Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
  271. Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
  272. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  273. Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
  274. Query 421 CA<font color="#000000">attttttcacccgatcggtaattttcacattgtttctattacttttattttcttttcc</font> 480
  275. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  276. Sbjct 4058880 CAATTTTTTCACCCGATCGGTAATTTTCACATTGTTTCTATTACTTTTATTTTCTTTTCC 4058939
  277. Query 481 <font color="#000000">attttattattattattattatgtgcattttta</font>GATCTTTGCGGGTAAATAGATTGAAAC 540
  278. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  279. Sbjct 4058940 ATTTTATTATTATTATTATTATGTGCATTTTTAGATCTTTGCGGGTAAATAGATTGAAAC 4058999
  280. Query 541 TGTTAGCTTTGTAAAGTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGAT 600
  281. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  282. Sbjct 4059000 TGTTAGCTTTGTAAAGTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGAT 4059059
  283. Query 601 TTTGAGAGTAACCTGGTTTGATGTGAATGTGGATACCATTTACTATTTACTGAATTTTCT 660
  284. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  285. Sbjct 4059060 TTTGAGAGTAACCTGGTTTGATGTGAATGTGGATACCATTTACTATTTACTGAATTTTCT 4059119
  286. Query 661 GATGTGTCTTGTATTGATTTGCTTAAACCGCTGATTGTTACTGCTTCTGCAGGTGAGTTA 720
  287. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  288. Sbjct 4059120 GATGTGTCTTGTATTGATTTGCTTAAACCGCTGATTGTTACTGCTTCTGCAGGTGAGTTA 4059179
  289. Query 721 TTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTTAGAATGGC 780
  290. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  291. Sbjct 4059180 TTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTTAGAATGGC 4059239
  292. Query 781 TTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTACCCGAGGA 840
  293. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  294. Sbjct 4059240 TTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTACCCGAGGA 4059299
  295. Query 841 GATGAATGACATGAAAATTAGGGATGACAAGG 872
  296. ||||||||||||||||||||||||||||||||
  297. Sbjct 4059300 GATGAATGACATGAAAATTAGGGATGACAAGG 4059331
  298. Score = 748 bits (389), Expect = 0.0
  299. Identities = 389/389 (100%), Gaps = 0/389 (0%)
  300. Strand=Plus/Plus
  301. Query 1904 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1963
  302. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  303. Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
  304. Query 1964 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 2023
  305. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  306. Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
  307. Query 2024 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 2083
  308. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  309. Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
  310. Query 2084 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 2143
  311. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  312. Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
  313. Query 2144 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 2203
  314. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  315. Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
  316. Query 2204 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2263
  317. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  318. Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
  319. Query 2264 TTGGAAACCATATGTTGTTTTCCTCCCAC 2292
  320. |||||||||||||||||||||||||||||
  321. Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
  322. Score = 531 bits (276), Expect = 2e-150
  323. Identities = 276/276 (100%), Gaps = 0/276 (0%)
  324. Strand=Plus/Plus
  325. Query 1022 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1081
  326. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  327. Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
  328. Query 1082 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1141
  329. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  330. Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
  331. Query 1142 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1201
  332. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  333. Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
  334. Query 1202 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 1261
  335. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  336. Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
  337. Query 1262 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1297
  338. ||||||||||||||||||||||||||||||||||||
  339. Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
  340. Score = 273 bits (142), Expect = 5e-73
  341. Identities = 142/142 (100%), Gaps = 0/142 (0%)
  342. Strand=Plus/Plus
  343. Query 1429 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1488
  344. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  345. Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
  346. Query 1489 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1548
  347. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  348. Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
  349. Query 1549 GGCTGAACTGCTACTGGGACAG 1570
  350. ||||||||||||||||||||||
  351. Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
  352. Score = 198 bits (103), Expect = 2e-50
  353. Identities = 103/103 (100%), Gaps = 0/103 (0%)
  354. Strand=Plus/Plus
  355. Query 1802 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1861
  356. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  357. Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
  358. Query 1862 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1904
  359. |||||||||||||||||||||||||||||||||||||||||||
  360. Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
  361. Score = 189 bits (98), Expect = 2e-47
  362. Identities = 98/98 (100%), Gaps = 0/98 (0%)
  363. Strand=Plus/Plus
  364. Query 1620 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1679
  365. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  366. Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
  367. Query 1680 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1717
  368. ||||||||||||||||||||||||||||||||||||||
  369. Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
  370. Score = 183 bits (95), Expect = 9e-46
  371. Identities = 95/95 (100%), Gaps = 0/95 (0%)
  372. Strand=Plus/Plus
  373. Query 870 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 929
  374. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  375. Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
  376. Query 930 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 964
  377. |||||||||||||||||||||||||||||||||||
  378. Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
  379. Score = 166 bits (86), Expect = 1e-40
  380. Identities = 86/86 (100%), Gaps = 0/86 (0%)
  381. Strand=Plus/Plus
  382. Query 1716 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1775
  383. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  384. Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
  385. Query 1776 ACTCTCCCAATCTTCGGAGCACAGCA 1801
  386. ||||||||||||||||||||||||||
  387. Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
  388. Score = 162 bits (84), Expect = 2e-39
  389. Identities = 152/186 (82%), Gaps = 0/186 (0%)
  390. Strand=Plus/Plus
  391. Query 1022 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1081
  392. |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
  393. Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
  394. Query 1082 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1141
  395. || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
  396. Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
  397. Query 1142 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1201
  398. ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
  399. Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
  400. Query 1202 GAGTAT 1207
  401. ||||||
  402. Sbjct 1684360 GAGTAT 1684365
  403. Score = 154 bits (80), Expect = 4e-37
  404. Identities = 80/80 (100%), Gaps = 0/80 (0%)
  405. Strand=Plus/Plus
  406. Query 1295 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1354
  407. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  408. Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
  409. Query 1355 AAGCCTCAAAATTTACTGGT 1374
  410. ||||||||||||||||||||
  411. Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
  412. Score = 121 bits (63), Expect = 3e-27
  413. Identities = 63/63 (100%), Gaps = 0/63 (0%)
  414. Strand=Plus/Plus
  415. Query 963 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 1022
  416. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  417. Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
  418. Query 1023 AGG 1025
  419. |||
  420. Sbjct 4059658 AGG 4059660
  421. Score = 117 bits (61), Expect = 4e-26
  422. Identities = 61/61 (100%), Gaps = 0/61 (0%)
  423. Strand=Plus/Plus
  424. Query 1372 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1431
  425. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  426. Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
  427. Query 1432 A 1432
  428. |
  429. Sbjct 4060539 A 4060539
  430. Score = 108 bits (56), Expect = 3e-23
  431. Identities = 56/56 (100%), Gaps = 0/56 (0%)
  432. Strand=Plus/Plus
  433. Query 1568 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1623
  434. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  435. Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
  436. Score = 87.2 bits (45), Expect = 8e-17
  437. Identities = 71/84 (85%), Gaps = 0/84 (0%)
  438. Strand=Plus/Plus
  439. Query 1634 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1693
  440. ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
  441. Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
  442. Query 1694 ATCAAAGCTCACCCGTGGCACAAG 1717
  443. || |||||||| || ||||| |||
  444. Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
  445. Score = 64.1 bits (33), Expect = 7e-10
  446. Identities = 99/132 (75%), Gaps = 0/132 (0%)
  447. Strand=Plus/Plus
  448. Query 1439 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1498
  449. ||||| || || || || || || |||||||| || | || || ||||||||||||||
  450. Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
  451. Query 1499 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1558
  452. || || || ||||| | || |||||||| ||||| || || || |||||||| ||
  453. Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
  454. Query 1559 CTACTGGGACAG 1570
  455. || || ||||||
  456. Sbjct 1685453 CTTCTTGGACAG 1685464
  457. Score = 60.3 bits (31), Expect = 1e-08
  458. Identities = 49/58 (84%), Gaps = 0/58 (0%)
  459. Strand=Plus/Plus
  460. Query 1365 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1422
  461. |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
  462. Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
  463. Score = 44.9 bits (23), Expect = 4e-04
  464. Identities = 27/29 (93%), Gaps = 0/29 (0%)
  465. Strand=Plus/Minus
  466. Query 1505 GAGTACACCGCAGCAATTGATATCTGGTC 1533
  467. ||||| || ||||||||||||||||||||
  468. Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
  469. Lambda K H
  470. 1.33 0.621 1.12
  471. Gapped
  472. Lambda K H
  473. 1.33 0.621 1.12
  474. Effective search space used: 12180278865
  475. <b>Query=</b> orange1.1g018514m PAC:18136222 (mRNA) Citrus sinensis
  476. Length=2029
  477. Score E
  478. Sequences producing significant alignments: (Bits) Value
  479. scaffold00001 length=5927163 <a href=#scaffold00001>848</a> 0.0
  480. >scaffold00001<a name=scaffold00001></a> length=5927163
  481. Length=5927163
  482. Score = 848 bits (441), Expect = 0.0
  483. Identities = 441/441 (100%), Gaps = 0/441 (0%)
  484. Strand=Plus/Plus
  485. Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
  486. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  487. Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
  488. Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
  489. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  490. Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
  491. Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
  492. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  493. Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
  494. Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
  495. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  496. Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
  497. Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
  498. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  499. Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
  500. Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
  501. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  502. Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
  503. Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
  504. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  505. Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
  506. Query 421 CAATTTTTTCACCCGATCGGT 441
  507. |||||||||||||||||||||
  508. Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
  509. Score = 748 bits (389), Expect = 0.0
  510. Identities = 389/389 (100%), Gaps = 0/389 (0%)
  511. Strand=Plus/Plus
  512. Query 1641 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1700
  513. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  514. Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
  515. Query 1701 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 1760
  516. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  517. Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
  518. Query 1761 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 1820
  519. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  520. Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
  521. Query 1821 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 1880
  522. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  523. Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
  524. Query 1881 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 1940
  525. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  526. Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
  527. Query 1941 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2000
  528. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  529. Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
  530. Query 2001 TTGGAAACCATATGTTGTTTTCCTCCCAC 2029
  531. |||||||||||||||||||||||||||||
  532. Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
  533. Score = 531 bits (276), Expect = 1e-150
  534. Identities = 276/276 (100%), Gaps = 0/276 (0%)
  535. Strand=Plus/Plus
  536. Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
  537. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  538. Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
  539. Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
  540. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  541. Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
  542. Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
  543. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  544. Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
  545. Query 929 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 988
  546. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  547. Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
  548. Query 989 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1024
  549. ||||||||||||||||||||||||||||||||||||
  550. Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
  551. Score = 310 bits (161), Expect = 5e-84
  552. Identities = 161/161 (100%), Gaps = 0/161 (0%)
  553. Strand=Plus/Plus
  554. Query 439 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 498
  555. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  556. Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
  557. Query 499 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 558
  558. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  559. Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
  560. Query 559 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 599
  561. |||||||||||||||||||||||||||||||||||||||||
  562. Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
  563. Score = 273 bits (142), Expect = 5e-73
  564. Identities = 142/142 (100%), Gaps = 0/142 (0%)
  565. Strand=Plus/Plus
  566. Query 1156 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1215
  567. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  568. Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
  569. Query 1216 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1275
  570. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  571. Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
  572. Query 1276 GGCTGAACTGCTACTGGGACAG 1297
  573. ||||||||||||||||||||||
  574. Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
  575. Score = 217 bits (113), Expect = 3e-56
  576. Identities = 113/113 (100%), Gaps = 0/113 (0%)
  577. Strand=Plus/Plus
  578. Query 1529 TTTGATGCAGTTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATAC 1588
  579. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  580. Sbjct 4061607 TTTGATGCAGTTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATAC 4061666
  581. Query 1589 CCGACTCCCAAATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1641
  582. |||||||||||||||||||||||||||||||||||||||||||||||||||||
  583. Sbjct 4061667 CCGACTCCCAAATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
  584. Score = 189 bits (98), Expect = 1e-47
  585. Identities = 98/98 (100%), Gaps = 0/98 (0%)
  586. Strand=Plus/Plus
  587. Query 1347 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1406
  588. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  589. Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
  590. Query 1407 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1444
  591. ||||||||||||||||||||||||||||||||||||||
  592. Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
  593. Score = 183 bits (95), Expect = 8e-46
  594. Identities = 95/95 (100%), Gaps = 0/95 (0%)
  595. Strand=Plus/Plus
  596. Query 597 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 656
  597. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  598. Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
  599. Query 657 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 691
  600. |||||||||||||||||||||||||||||||||||
  601. Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
  602. Score = 166 bits (86), Expect = 1e-40
  603. Identities = 86/86 (100%), Gaps = 0/86 (0%)
  604. Strand=Plus/Plus
  605. Query 1443 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1502
  606. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  607. Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
  608. Query 1503 ACTCTCCCAATCTTCGGAGCACAGCA 1528
  609. ||||||||||||||||||||||||||
  610. Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
  611. Score = 162 bits (84), Expect = 2e-39
  612. Identities = 152/186 (82%), Gaps = 0/186 (0%)
  613. Strand=Plus/Plus
  614. Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
  615. |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
  616. Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
  617. Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
  618. || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
  619. Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
  620. Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
  621. ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
  622. Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
  623. Query 929 GAGTAT 934
  624. ||||||
  625. Sbjct 1684360 GAGTAT 1684365
  626. Score = 154 bits (80), Expect = 4e-37
  627. Identities = 80/80 (100%), Gaps = 0/80 (0%)
  628. Strand=Plus/Plus
  629. Query 1022 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1081
  630. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  631. Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
  632. Query 1082 AAGCCTCAAAATTTACTGGT 1101
  633. ||||||||||||||||||||
  634. Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
  635. Score = 121 bits (63), Expect = 3e-27
  636. Identities = 63/63 (100%), Gaps = 0/63 (0%)
  637. Strand=Plus/Plus
  638. Query 690 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 749
  639. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  640. Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
  641. Query 750 AGG 752
  642. |||
  643. Sbjct 4059658 AGG 4059660
  644. Score = 117 bits (61), Expect = 4e-26
  645. Identities = 61/61 (100%), Gaps = 0/61 (0%)
  646. Strand=Plus/Plus
  647. Query 1099 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1158
  648. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  649. Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
  650. Query 1159 A 1159
  651. |
  652. Sbjct 4060539 A 4060539
  653. Score = 108 bits (56), Expect = 3e-23
  654. Identities = 56/56 (100%), Gaps = 0/56 (0%)
  655. Strand=Plus/Plus
  656. Query 1295 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1350
  657. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  658. Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
  659. Score = 87.2 bits (45), Expect = 7e-17
  660. Identities = 71/84 (85%), Gaps = 0/84 (0%)
  661. Strand=Plus/Plus
  662. Query 1361 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1420
  663. ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
  664. Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
  665. Query 1421 ATCAAAGCTCACCCGTGGCACAAG 1444
  666. || |||||||| || ||||| |||
  667. Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
  668. Score = 64.1 bits (33), Expect = 6e-10
  669. Identities = 99/132 (75%), Gaps = 0/132 (0%)
  670. Strand=Plus/Plus
  671. Query 1166 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1225
  672. ||||| || || || || || || |||||||| || | || || ||||||||||||||
  673. Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
  674. Query 1226 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1285
  675. || || || ||||| | || |||||||| ||||| || || || |||||||| ||
  676. Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
  677. Query 1286 CTACTGGGACAG 1297
  678. || || ||||||
  679. Sbjct 1685453 CTTCTTGGACAG 1685464
  680. Score = 60.3 bits (31), Expect = 8e-09
  681. Identities = 49/58 (84%), Gaps = 0/58 (0%)
  682. Strand=Plus/Plus
  683. Query 1092 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1149
  684. |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
  685. Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
  686. Score = 44.9 bits (23), Expect = 4e-04
  687. Identities = 27/29 (93%), Gaps = 0/29 (0%)
  688. Strand=Plus/Minus
  689. Query 1232 GAGTACACCGCAGCAATTGATATCTGGTC 1260
  690. ||||| || ||||||||||||||||||||
  691. Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
  692. Lambda K H
  693. 1.33 0.621 1.12
  694. Gapped
  695. Lambda K H
  696. 1.33 0.621 1.12
  697. Effective search space used: 12180278865
  698. Database: Citrus_sinensis-scaffold00001.fasta
  699. Posted date: Jun 10, 2018 8:23 PM
  700. Number of letters in database: 5,927,163
  701. Number of sequences in database: 1
  702. Matrix: blastn matrix 1 -2
  703. Gap Penalties: Existence: 5, Extension: 2
  704. </PRE>
  705. </BODY>
  706. </HTML>
  707. <HTML>
  708. <TITLE>BLAST Search Results</TITLE>
  709. <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
  710. <PRE>
  711. <b>BLASTN 2.6.0+</b>
  712. <b><a
  713. href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=R
  714. etrieve&list_uids=10890397&dopt=Citation">Reference</a>:</b>
  715. Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
  716. "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
  717. 7(1-2):203-14.
  718. Database: Citrus_sinensis-scaffold00001.fasta
  719. 1 sequences; 5,927,163 total letters
  720. <b>Query=</b> orange1.1g015615m PAC:18136219 (mRNA) Citrus sinensis
  721. Length=2019
  722. Score E
  723. Sequences producing significant alignments: (Bits) Value
  724. scaffold00001 length=5927163 <a href=#scaffold00001>848</a> 0.0
  725. >scaffold00001<a name=scaffold00001></a> length=5927163
  726. Length=5927163
  727. Score = 848 bits (441), Expect = 0.0
  728. Identities = 441/441 (100%), Gaps = 0/441 (0%)
  729. Strand=Plus/Plus
  730. Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
  731. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  732. Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
  733. Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
  734. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  735. Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
  736. Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
  737. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  738. Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
  739. Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
  740. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  741. Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
  742. Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
  743. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  744. Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
  745. Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
  746. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  747. Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
  748. Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
  749. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  750. Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
  751. Query 421 CAATTTTTTCACCCGATCGGT 441
  752. |||||||||||||||||||||
  753. Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
  754. Score = 748 bits (389), Expect = 0.0
  755. Identities = 389/389 (100%), Gaps = 0/389 (0%)
  756. Strand=Plus/Plus
  757. Query 1631 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1690
  758. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  759. Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
  760. Query 1691 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 1750
  761. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  762. Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
  763. Query 1751 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 1810
  764. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  765. Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
  766. Query 1811 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 1870
  767. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  768. Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
  769. Query 1871 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 1930
  770. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  771. Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
  772. Query 1931 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 1990
  773. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  774. Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
  775. Query 1991 TTGGAAACCATATGTTGTTTTCCTCCCAC 2019
  776. |||||||||||||||||||||||||||||
  777. Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
  778. Score = 531 bits (276), Expect = 1e-150
  779. Identities = 276/276 (100%), Gaps = 0/276 (0%)
  780. Strand=Plus/Plus
  781. Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
  782. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  783. Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
  784. Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
  785. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  786. Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
  787. Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
  788. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  789. Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
  790. Query 929 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 988
  791. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  792. Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
  793. Query 989 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1024
  794. ||||||||||||||||||||||||||||||||||||
  795. Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
  796. Score = 310 bits (161), Expect = 5e-84
  797. Identities = 161/161 (100%), Gaps = 0/161 (0%)
  798. Strand=Plus/Plus
  799. Query 439 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 498
  800. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  801. Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
  802. Query 499 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 558
  803. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  804. Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
  805. Query 559 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 599
  806. |||||||||||||||||||||||||||||||||||||||||
  807. Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
  808. Score = 273 bits (142), Expect = 5e-73
  809. Identities = 142/142 (100%), Gaps = 0/142 (0%)
  810. Strand=Plus/Plus
  811. Query 1156 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1215
  812. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  813. Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
  814. Query 1216 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1275
  815. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  816. Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
  817. Query 1276 GGCTGAACTGCTACTGGGACAG 1297
  818. ||||||||||||||||||||||
  819. Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
  820. Score = 198 bits (103), Expect = 2e-50
  821. Identities = 103/103 (100%), Gaps = 0/103 (0%)
  822. Strand=Plus/Plus
  823. Query 1529 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1588
  824. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  825. Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
  826. Query 1589 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1631
  827. |||||||||||||||||||||||||||||||||||||||||||
  828. Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
  829. Score = 189 bits (98), Expect = 1e-47
  830. Identities = 98/98 (100%), Gaps = 0/98 (0%)
  831. Strand=Plus/Plus
  832. Query 1347 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1406
  833. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  834. Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
  835. Query 1407 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1444
  836. ||||||||||||||||||||||||||||||||||||||
  837. Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
  838. Score = 183 bits (95), Expect = 8e-46
  839. Identities = 95/95 (100%), Gaps = 0/95 (0%)
  840. Strand=Plus/Plus
  841. Query 597 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 656
  842. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  843. Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
  844. Query 657 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 691
  845. |||||||||||||||||||||||||||||||||||
  846. Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
  847. Score = 166 bits (86), Expect = 1e-40
  848. Identities = 86/86 (100%), Gaps = 0/86 (0%)
  849. Strand=Plus/Plus
  850. Query 1443 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1502
  851. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  852. Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
  853. Query 1503 ACTCTCCCAATCTTCGGAGCACAGCA 1528
  854. ||||||||||||||||||||||||||
  855. Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
  856. Score = 162 bits (84), Expect = 2e-39
  857. Identities = 152/186 (82%), Gaps = 0/186 (0%)
  858. Strand=Plus/Plus
  859. Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
  860. |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
  861. Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
  862. Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
  863. || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
  864. Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
  865. Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
  866. ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
  867. Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
  868. Query 929 GAGTAT 934
  869. ||||||
  870. Sbjct 1684360 GAGTAT 1684365
  871. Score = 154 bits (80), Expect = 4e-37
  872. Identities = 80/80 (100%), Gaps = 0/80 (0%)
  873. Strand=Plus/Plus
  874. Query 1022 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1081
  875. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  876. Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
  877. Query 1082 AAGCCTCAAAATTTACTGGT 1101
  878. ||||||||||||||||||||
  879. Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
  880. Score = 121 bits (63), Expect = 3e-27
  881. Identities = 63/63 (100%), Gaps = 0/63 (0%)
  882. Strand=Plus/Plus
  883. Query 690 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 749
  884. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  885. Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
  886. Query 750 AGG 752
  887. |||
  888. Sbjct 4059658 AGG 4059660
  889. Score = 117 bits (61), Expect = 4e-26
  890. Identities = 61/61 (100%), Gaps = 0/61 (0%)
  891. Strand=Plus/Plus
  892. Query 1099 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1158
  893. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  894. Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
  895. Query 1159 A 1159
  896. |
  897. Sbjct 4060539 A 4060539
  898. Score = 108 bits (56), Expect = 3e-23
  899. Identities = 56/56 (100%), Gaps = 0/56 (0%)
  900. Strand=Plus/Plus
  901. Query 1295 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1350
  902. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  903. Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
  904. Score = 87.2 bits (45), Expect = 7e-17
  905. Identities = 71/84 (85%), Gaps = 0/84 (0%)
  906. Strand=Plus/Plus
  907. Query 1361 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1420
  908. ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
  909. Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
  910. Query 1421 ATCAAAGCTCACCCGTGGCACAAG 1444
  911. || |||||||| || ||||| |||
  912. Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
  913. Score = 64.1 bits (33), Expect = 6e-10
  914. Identities = 99/132 (75%), Gaps = 0/132 (0%)
  915. Strand=Plus/Plus
  916. Query 1166 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1225
  917. ||||| || || || || || || |||||||| || | || || ||||||||||||||
  918. Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
  919. Query 1226 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1285
  920. || || || ||||| | || |||||||| ||||| || || || |||||||| ||
  921. Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
  922. Query 1286 CTACTGGGACAG 1297
  923. || || ||||||
  924. Sbjct 1685453 CTTCTTGGACAG 1685464
  925. Score = 60.3 bits (31), Expect = 8e-09
  926. Identities = 49/58 (84%), Gaps = 0/58 (0%)
  927. Strand=Plus/Plus
  928. Query 1092 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1149
  929. |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
  930. Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
  931. Score = 44.9 bits (23), Expect = 4e-04
  932. Identities = 27/29 (93%), Gaps = 0/29 (0%)
  933. Strand=Plus/Minus
  934. Query 1232 GAGTACACCGCAGCAATTGATATCTGGTC 1260
  935. ||||| || ||||||||||||||||||||
  936. Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
  937. Lambda K H
  938. 1.33 0.621 1.12
  939. Gapped
  940. Lambda K H
  941. 1.33 0.621 1.12
  942. Effective search space used: 11848358857
  943. <b>Query=</b> orange1.1g015645m PAC:18136218 (mRNA) Citrus sinensis
  944. Length=2091
  945. Score E
  946. Sequences producing significant alignments: (Bits) Value
  947. scaffold00001 length=5927163 <a href=#scaffold00001>844</a> 0.0
  948. >scaffold00001<a name=scaffold00001></a> length=5927163
  949. Length=5927163
  950. Score = 844 bits (439), Expect = 0.0
  951. Identities = 439/439 (100%), Gaps = 0/439 (0%)
  952. Strand=Plus/Plus
  953. Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
  954. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  955. Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
  956. Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
  957. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  958. Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
  959. Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
  960. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  961. Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
  962. Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
  963. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  964. Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
  965. Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
  966. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  967. Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
  968. Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
  969. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  970. Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
  971. Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
  972. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  973. Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
  974. Query 421 CAATTTTTTCACCCGATCG 439
  975. |||||||||||||||||||
  976. Sbjct 4058880 CAATTTTTTCACCCGATCG 4058898
  977. Score = 748 bits (389), Expect = 0.0
  978. Identities = 389/389 (100%), Gaps = 0/389 (0%)
  979. Strand=Plus/Plus
  980. Query 1703 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1762
  981. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  982. Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
  983. Query 1763 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 1822
  984. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  985. Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
  986. Query 1823 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 1882
  987. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  988. Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
  989. Query 1883 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 1942
  990. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  991. Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
  992. Query 1943 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 2002
  993. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  994. Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
  995. Query 2003 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2062
  996. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  997. Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
  998. Query 2063 TTGGAAACCATATGTTGTTTTCCTCCCAC 2091
  999. |||||||||||||||||||||||||||||
  1000. Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
  1001. Score = 531 bits (276), Expect = 1e-150
  1002. Identities = 276/276 (100%), Gaps = 0/276 (0%)
  1003. Strand=Plus/Plus
  1004. Query 821 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 880
  1005. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1006. Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
  1007. Query 881 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 940
  1008. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1009. Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
  1010. Query 941 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1000
  1011. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1012. Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
  1013. Query 1001 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 1060
  1014. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1015. Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
  1016. Query 1061 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1096
  1017. ||||||||||||||||||||||||||||||||||||
  1018. Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
  1019. Score = 308 bits (160), Expect = 2e-83
  1020. Identities = 160/160 (100%), Gaps = 0/160 (0%)
  1021. Strand=Plus/Plus
  1022. Query 512 GTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTT 571
  1023. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1024. Sbjct 4059172 GTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTT 4059231
  1025. Query 572 AGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTA 631
  1026. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1027. Sbjct 4059232 AGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTA 4059291
  1028. Query 632 CCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 671
  1029. ||||||||||||||||||||||||||||||||||||||||
  1030. Sbjct 4059292 CCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
  1031. Score = 273 bits (142), Expect = 5e-73
  1032. Identities = 142/142 (100%), Gaps = 0/142 (0%)
  1033. Strand=Plus/Plus
  1034. Query 1228 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1287
  1035. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1036. Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
  1037. Query 1288 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1347
  1038. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1039. Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
  1040. Query 1348 GGCTGAACTGCTACTGGGACAG 1369
  1041. ||||||||||||||||||||||
  1042. Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
  1043. Score = 198 bits (103), Expect = 2e-50
  1044. Identities = 103/103 (100%), Gaps = 0/103 (0%)
  1045. Strand=Plus/Plus
  1046. Query 1601 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1660
  1047. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1048. Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
  1049. Query 1661 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1703
  1050. |||||||||||||||||||||||||||||||||||||||||||
  1051. Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
  1052. Score = 189 bits (98), Expect = 1e-47
  1053. Identities = 98/98 (100%), Gaps = 0/98 (0%)
  1054. Strand=Plus/Plus
  1055. Query 1419 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1478
  1056. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1057. Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
  1058. Query 1479 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1516
  1059. ||||||||||||||||||||||||||||||||||||||
  1060. Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
  1061. Score = 183 bits (95), Expect = 8e-46
  1062. Identities = 95/95 (100%), Gaps = 0/95 (0%)
  1063. Strand=Plus/Plus
  1064. Query 669 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 728
  1065. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1066. Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
  1067. Query 729 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 763
  1068. |||||||||||||||||||||||||||||||||||
  1069. Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
  1070. Score = 166 bits (86), Expect = 1e-40
  1071. Identities = 86/86 (100%), Gaps = 0/86 (0%)
  1072. Strand=Plus/Plus
  1073. Query 1515 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1574
  1074. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1075. Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
  1076. Query 1575 ACTCTCCCAATCTTCGGAGCACAGCA 1600
  1077. ||||||||||||||||||||||||||
  1078. Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
  1079. Score = 162 bits (84), Expect = 2e-39
  1080. Identities = 152/186 (82%), Gaps = 0/186 (0%)
  1081. Strand=Plus/Plus
  1082. Query 821 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 880
  1083. |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
  1084. Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
  1085. Query 881 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 940
  1086. || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
  1087. Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
  1088. Query 941 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1000
  1089. ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
  1090. Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
  1091. Query 1001 GAGTAT 1006
  1092. ||||||
  1093. Sbjct 1684360 GAGTAT 1684365
  1094. Score = 154 bits (80), Expect = 4e-37
  1095. Identities = 80/80 (100%), Gaps = 0/80 (0%)
  1096. Strand=Plus/Plus
  1097. Query 1094 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1153
  1098. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1099. Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
  1100. Query 1154 AAGCCTCAAAATTTACTGGT 1173
  1101. ||||||||||||||||||||
  1102. Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
  1103. Score = 146 bits (76), Expect = 8e-35
  1104. Identities = 76/76 (100%), Gaps = 0/76 (0%)
  1105. Strand=Plus/Plus
  1106. Query 439 GTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGATTTTGAGAGTAACCTG 498
  1107. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1108. Sbjct 4059015 GTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGATTTTGAGAGTAACCTG 4059074
  1109. Query 499 GTTTGATGTGAATGTG 514
  1110. ||||||||||||||||
  1111. Sbjct 4059075 GTTTGATGTGAATGTG 4059090
  1112. Score = 121 bits (63), Expect = 3e-27
  1113. Identities = 63/63 (100%), Gaps = 0/63 (0%)
  1114. Strand=Plus/Plus
  1115. Query 762 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 821
  1116. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1117. Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
  1118. Query 822 AGG 824
  1119. |||
  1120. Sbjct 4059658 AGG 4059660
  1121. Score = 117 bits (61), Expect = 4e-26
  1122. Identities = 61/61 (100%), Gaps = 0/61 (0%)
  1123. Strand=Plus/Plus
  1124. Query 1171 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1230
  1125. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1126. Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
  1127. Query 1231 A 1231
  1128. |
  1129. Sbjct 4060539 A 4060539
  1130. Score = 108 bits (56), Expect = 3e-23
  1131. Identities = 56/56 (100%), Gaps = 0/56 (0%)
  1132. Strand=Plus/Plus
  1133. Query 1367 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1422
  1134. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1135. Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
  1136. Score = 87.2 bits (45), Expect = 7e-17
  1137. Identities = 71/84 (85%), Gaps = 0/84 (0%)
  1138. Strand=Plus/Plus
  1139. Query 1433 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1492
  1140. ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
  1141. Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
  1142. Query 1493 ATCAAAGCTCACCCGTGGCACAAG 1516
  1143. || |||||||| || ||||| |||
  1144. Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
  1145. Score = 64.1 bits (33), Expect = 6e-10
  1146. Identities = 99/132 (75%), Gaps = 0/132 (0%)
  1147. Strand=Plus/Plus
  1148. Query 1238 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1297
  1149. ||||| || || || || || || |||||||| || | || || ||||||||||||||
  1150. Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
  1151. Query 1298 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1357
  1152. || || || ||||| | || |||||||| ||||| || || || |||||||| ||
  1153. Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
  1154. Query 1358 CTACTGGGACAG 1369
  1155. || || ||||||
  1156. Sbjct 1685453 CTTCTTGGACAG 1685464
  1157. Score = 60.3 bits (31), Expect = 9e-09
  1158. Identities = 49/58 (84%), Gaps = 0/58 (0%)
  1159. Strand=Plus/Plus
  1160. Query 1164 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1221
  1161. |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
  1162. Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
  1163. Score = 44.9 bits (23), Expect = 4e-04
  1164. Identities = 27/29 (93%), Gaps = 0/29 (0%)
  1165. Strand=Plus/Minus
  1166. Query 1304 GAGTACACCGCAGCAATTGATATCTGGTC 1332
  1167. ||||| || ||||||||||||||||||||
  1168. Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
  1169. Lambda K H
  1170. 1.33 0.621 1.12
  1171. Gapped
  1172. Lambda K H
  1173. 1.33 0.621 1.12
  1174. Effective search space used: 11848358857
  1175. <b>Query=</b> orange1.1g022520m PAC:18136223 (mRNA) Citrus sinensis
  1176. Length=1655
  1177. Score E
  1178. Sequences producing significant alignments: (Bits) Value
  1179. scaffold00001 length=5927163 <a href=#scaffold00001>848</a> 0.0
  1180. >scaffold00001<a name=scaffold00001></a> length=5927163
  1181. Length=5927163
  1182. Score = 848 bits (441), Expect = 0.0
  1183. Identities = 441/441 (100%), Gaps = 0/441 (0%)
  1184. Strand=Plus/Plus
  1185. Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
  1186. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1187. Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
  1188. Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
  1189. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1190. Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
  1191. Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
  1192. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1193. Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
  1194. Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
  1195. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1196. Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
  1197. Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
  1198. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1199. Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
  1200. Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
  1201. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1202. Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
  1203. Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
  1204. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1205. Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
  1206. Query 421 CAATTTTTTCACCCGATCGGT 441
  1207. |||||||||||||||||||||
  1208. Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
  1209. Score = 694 bits (361), Expect = 0.0
  1210. Identities = 361/361 (100%), Gaps = 0/361 (0%)
  1211. Strand=Plus/Plus
  1212. Query 1295 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGTAATT 1354
  1213. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1214. Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGTAATT 4060913
  1215. Query 1355 TTACACACTGAAATTTCTTTATCAATAAAAGCTGCCTAATGACTCTACTTAAAGCTATTT 1414
  1216. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1217. Sbjct 4060914 TTACACACTGAAATTTCTTTATCAATAAAAGCTGCCTAATGACTCTACTTAAAGCTATTT 4060973
  1218. Query 1415 GAAGCTAGCGTCTGAATTTATAGGGCTGCAATTTGGCATTCTAGTGATTCCTTATTGTTG 1474
  1219. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1220. Sbjct 4060974 GAAGCTAGCGTCTGAATTTATAGGGCTGCAATTTGGCATTCTAGTGATTCCTTATTGTTG 4061033
  1221. Query 1475 GGCCTCCTAAATTCTCTTTGAGAATGATGGTCAATGATAAGGTTTTTGCCTTGTAACATG 1534
  1222. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1223. Sbjct 4061034 GGCCTCCTAAATTCTCTTTGAGAATGATGGTCAATGATAAGGTTTTTGCCTTGTAACATG 4061093
  1224. Query 1535 CGACAAATAGTTTGATATTGATCCAAGGAATTTCTTTTCTTTGTTGGCAACATCAAAAAG 1594
  1225. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1226. Sbjct 4061094 CGACAAATAGTTTGATATTGATCCAAGGAATTTCTTTTCTTTGTTGGCAACATCAAAAAG 4061153
  1227. Query 1595 ATCCTTAGTTTGATCAAGCTGGATGCCTGTTGTGTCTTTTCTCTTATTATATTGTATTTT 1654
  1228. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1229. Sbjct 4061154 ATCCTTAGTTTGATCAAGCTGGATGCCTGTTGTGTCTTTTCTCTTATTATATTGTATTTT 4061213
  1230. Query 1655 C 1655
  1231. |
  1232. Sbjct 4061214 C 4061214
  1233. Score = 531 bits (276), Expect = 1e-150
  1234. Identities = 276/276 (100%), Gaps = 0/276 (0%)
  1235. Strand=Plus/Plus
  1236. Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
  1237. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1238. Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
  1239. Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
  1240. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1241. Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
  1242. Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
  1243. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1244. Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
  1245. Query 929 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 988
  1246. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1247. Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
  1248. Query 989 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1024
  1249. ||||||||||||||||||||||||||||||||||||
  1250. Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
  1251. Score = 310 bits (161), Expect = 4e-84
  1252. Identities = 161/161 (100%), Gaps = 0/161 (0%)
  1253. Strand=Plus/Plus
  1254. Query 439 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 498
  1255. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1256. Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
  1257. Query 499 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 558
  1258. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1259. Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
  1260. Query 559 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 599
  1261. |||||||||||||||||||||||||||||||||||||||||
  1262. Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
  1263. Score = 273 bits (142), Expect = 4e-73
  1264. Identities = 142/142 (100%), Gaps = 0/142 (0%)
  1265. Strand=Plus/Plus
  1266. Query 1156 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1215
  1267. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1268. Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
  1269. Query 1216 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1275
  1270. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1271. Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
  1272. Query 1276 GGCTGAACTGCTACTGGGACAG 1297
  1273. ||||||||||||||||||||||
  1274. Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
  1275. Score = 183 bits (95), Expect = 6e-46
  1276. Identities = 95/95 (100%), Gaps = 0/95 (0%)
  1277. Strand=Plus/Plus
  1278. Query 597 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 656
  1279. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1280. Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
  1281. Query 657 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 691
  1282. |||||||||||||||||||||||||||||||||||
  1283. Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
  1284. Score = 162 bits (84), Expect = 1e-39
  1285. Identities = 152/186 (82%), Gaps = 0/186 (0%)
  1286. Strand=Plus/Plus
  1287. Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
  1288. |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
  1289. Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
  1290. Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
  1291. || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
  1292. Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
  1293. Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
  1294. ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
  1295. Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
  1296. Query 929 GAGTAT 934
  1297. ||||||
  1298. Sbjct 1684360 GAGTAT 1684365
  1299. Score = 154 bits (80), Expect = 3e-37
  1300. Identities = 80/80 (100%), Gaps = 0/80 (0%)
  1301. Strand=Plus/Plus
  1302. Query 1022 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1081
  1303. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1304. Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
  1305. Query 1082 AAGCCTCAAAATTTACTGGT 1101
  1306. ||||||||||||||||||||
  1307. Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
  1308. Score = 121 bits (63), Expect = 2e-27
  1309. Identities = 63/63 (100%), Gaps = 0/63 (0%)
  1310. Strand=Plus/Plus
  1311. Query 690 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 749
  1312. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1313. Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
  1314. Query 750 AGG 752
  1315. |||
  1316. Sbjct 4059658 AGG 4059660
  1317. Score = 117 bits (61), Expect = 3e-26
  1318. Identities = 61/61 (100%), Gaps = 0/61 (0%)
  1319. Strand=Plus/Plus
  1320. Query 1099 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1158
  1321. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1322. Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
  1323. Query 1159 A 1159
  1324. |
  1325. Sbjct 4060539 A 4060539
  1326. Score = 64.1 bits (33), Expect = 5e-10
  1327. Identities = 99/132 (75%), Gaps = 0/132 (0%)
  1328. Strand=Plus/Plus
  1329. Query 1166 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1225
  1330. ||||| || || || || || || |||||||| || | || || ||||||||||||||
  1331. Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
  1332. Query 1226 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1285
  1333. || || || ||||| | || |||||||| ||||| || || || |||||||| ||
  1334. Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
  1335. Query 1286 CTACTGGGACAG 1297
  1336. || || ||||||
  1337. Sbjct 1685453 CTTCTTGGACAG 1685464
  1338. Score = 60.3 bits (31), Expect = 7e-09
  1339. Identities = 49/58 (84%), Gaps = 0/58 (0%)
  1340. Strand=Plus/Plus
  1341. Query 1092 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1149
  1342. |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
  1343. Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
  1344. Score = 44.9 bits (23), Expect = 3e-04
  1345. Identities = 27/29 (93%), Gaps = 0/29 (0%)
  1346. Strand=Plus/Minus
  1347. Query 1232 GAGTACACCGCAGCAATTGATATCTGGTC 1260
  1348. ||||| || ||||||||||||||||||||
  1349. Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
  1350. Lambda K H
  1351. 1.33 0.621 1.12
  1352. Gapped
  1353. Lambda K H
  1354. 1.33 0.621 1.12
  1355. Effective search space used: 11848358857
  1356. <b>Query=</b> orange1.1g022799m PAC:18136224 (mRNA) Citrus sinensis
  1357. Length=2325
  1358. Score E
  1359. Sequences producing significant alignments: (Bits) Value
  1360. scaffold00001 length=5927163 <a href=#scaffold00001>1715</a> 0.0
  1361. >scaffold00001<a name=scaffold00001></a> length=5927163
  1362. Length=5927163
  1363. Score = 1715 bits (892), Expect = 0.0
  1364. Identities = 892/892 (100%), Gaps = 0/892 (0%)
  1365. Strand=Plus/Plus
  1366. Query 439 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 498
  1367. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1368. Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
  1369. Query 499 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 558
  1370. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1371. Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
  1372. Query 559 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGGTATATGA<font color="#000000">tttttttt</font>CTTC 618
  1373. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1374. Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGGTATATGATTTTTTTTCTTC 4059350
  1375. Query 619 TTGTTGATTTTTTGCTGCTTCGTGACAATC<font color="#000000">tttttttttt</font>ACTTACTTGAAAGCTATTAA 678
  1376. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1377. Sbjct 4059351 TTGTTGATTTTTTGCTGCTTCGTGACAATCTTTTTTTTTTACTTACTTGAAAGCTATTAA 4059410
  1378. Query 679 ATTTTATGCAGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATA 738
  1379. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1380. Sbjct 4059411 ATTTTATGCAGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATA 4059470
  1381. Query 739 TAATTGTCACCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG<font color="#000000">gtttacttttgttttt</font> 798
  1382. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1383. Sbjct 4059471 TAATTGTCACCACTATTGGGGGTAAAAATGGGCAGCCCAAACAGGTTTACTTTTGTTTTT 4059530
  1384. Query 799 <font color="#000000">cagaaaatgctgttcagtttttatttgcttttt</font>CTTGTACTGATATGTGTGGCCTTCTTA 858
  1385. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1386. Sbjct 4059531 CAGAAAATGCTGTTCAGTTTTTATTTGCTTTTTCTTGTACTGATATGTGTGGCCTTCTTA 4059590
  1387. Query 859 TTATTGTAGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTA 918
  1388. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1389. Sbjct 4059591 TTATTGTAGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTA 4059650
  1390. Query 919 GTTTTCCAGGTAATCTAGCTGCCGATTGGCAATCATAGTTGGGTCTTTTAAAACTCGGGG 978
  1391. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1392. Sbjct 4059651 GTTTTCCAGGTAATCTAGCTGCCGATTGGCAATCATAGTTGGGTCTTTTAAAACTCGGGG 4059710
  1393. Query 979 GTTGCATCTGATTTTATGTTCGGTCAAGGTTTGGCATTCCTCTTATTCTGCTGCCTTTGT 1038
  1394. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1395. Sbjct 4059711 GTTGCATCTGATTTTATGTTCGGTCAAGGTTTGGCATTCCTCTTATTCTGCTGCCTTTGT 4059770
  1396. Query 1039 TGTGGGTTTACTTATACAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAA 1098
  1397. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1398. Sbjct 4059771 TGTGGGTTTACTTATACAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAA 4059830
  1399. Query 1099 GGTTCTTCAGGACAAGAGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCA 1158
  1400. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1401. Sbjct 4059831 GGTTCTTCAGGACAAGAGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCA 4059890
  1402. Query 1159 CCCAAATGTTGTGTCCCTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATA 1218
  1403. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1404. Sbjct 4059891 CCCAAATGTTGTGTCCCTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATA 4059950
  1405. Query 1219 TCTTAACCTTGTTCTTGAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTA 1278
  1406. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1407. Sbjct 4059951 TCTTAACCTTGTTCTTGAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTA 4060010
  1408. Query 1279 TAAAATGAGCCAAAGGATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1330
  1409. ||||||||||||||||||||||||||||||||||||||||||||||||||||
  1410. Sbjct 4060011 TAAAATGAGCCAAAGGATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
  1411. Score = 848 bits (441), Expect = 0.0
  1412. Identities = 441/441 (100%), Gaps = 0/441 (0%)
  1413. Strand=Plus/Plus
  1414. Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
  1415. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1416. Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
  1417. Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
  1418. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1419. Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
  1420. Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
  1421. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1422. Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
  1423. Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
  1424. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1425. Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
  1426. Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
  1427. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1428. Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
  1429. Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
  1430. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1431. Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
  1432. Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
  1433. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1434. Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
  1435. Query 421 CAATTTTTTCACCCGATCGGT 441
  1436. |||||||||||||||||||||
  1437. Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
  1438. Score = 748 bits (389), Expect = 0.0
  1439. Identities = 389/389 (100%), Gaps = 0/389 (0%)
  1440. Strand=Plus/Plus
  1441. Query 1937 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1996
  1442. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1443. Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
  1444. Query 1997 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 2056
  1445. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1446. Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
  1447. Query 2057 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 2116
  1448. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1449. Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
  1450. Query 2117 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 2176
  1451. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1452. Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
  1453. Query 2177 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 2236
  1454. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1455. Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
  1456. Query 2237 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2296
  1457. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1458. Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
  1459. Query 2297 TTGGAAACCATATGTTGTTTTCCTCCCAC 2325
  1460. |||||||||||||||||||||||||||||
  1461. Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
  1462. Score = 273 bits (142), Expect = 6e-73
  1463. Identities = 142/142 (100%), Gaps = 0/142 (0%)
  1464. Strand=Plus/Plus
  1465. Query 1462 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1521
  1466. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1467. Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
  1468. Query 1522 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1581
  1469. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1470. Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
  1471. Query 1582 GGCTGAACTGCTACTGGGACAG 1603
  1472. ||||||||||||||||||||||
  1473. Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
  1474. Score = 198 bits (103), Expect = 2e-50
  1475. Identities = 103/103 (100%), Gaps = 0/103 (0%)
  1476. Strand=Plus/Plus
  1477. Query 1835 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1894
  1478. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1479. Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
  1480. Query 1895 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1937
  1481. |||||||||||||||||||||||||||||||||||||||||||
  1482. Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
  1483. Score = 189 bits (98), Expect = 2e-47
  1484. Identities = 98/98 (100%), Gaps = 0/98 (0%)
  1485. Strand=Plus/Plus
  1486. Query 1653 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1712
  1487. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1488. Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
  1489. Query 1713 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1750
  1490. ||||||||||||||||||||||||||||||||||||||
  1491. Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
  1492. Score = 166 bits (86), Expect = 1e-40
  1493. Identities = 86/86 (100%), Gaps = 0/86 (0%)
  1494. Strand=Plus/Plus
  1495. Query 1749 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1808
  1496. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1497. Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
  1498. Query 1809 ACTCTCCCAATCTTCGGAGCACAGCA 1834
  1499. ||||||||||||||||||||||||||
  1500. Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
  1501. Score = 162 bits (84), Expect = 2e-39
  1502. Identities = 152/186 (82%), Gaps = 0/186 (0%)
  1503. Strand=Plus/Plus
  1504. Query 1055 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1114
  1505. |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
  1506. Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
  1507. Query 1115 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1174
  1508. || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
  1509. Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
  1510. Query 1175 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1234
  1511. ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
  1512. Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
  1513. Query 1235 GAGTAT 1240
  1514. ||||||
  1515. Sbjct 1684360 GAGTAT 1684365
  1516. Score = 154 bits (80), Expect = 4e-37
  1517. Identities = 80/80 (100%), Gaps = 0/80 (0%)
  1518. Strand=Plus/Plus
  1519. Query 1328 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1387
  1520. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1521. Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
  1522. Query 1388 AAGCCTCAAAATTTACTGGT 1407
  1523. ||||||||||||||||||||
  1524. Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
  1525. Score = 117 bits (61), Expect = 4e-26
  1526. Identities = 61/61 (100%), Gaps = 0/61 (0%)
  1527. Strand=Plus/Plus
  1528. Query 1405 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1464
  1529. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1530. Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
  1531. Query 1465 A 1465
  1532. |
  1533. Sbjct 4060539 A 4060539
  1534. Score = 108 bits (56), Expect = 3e-23
  1535. Identities = 56/56 (100%), Gaps = 0/56 (0%)
  1536. Strand=Plus/Plus
  1537. Query 1601 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1656
  1538. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1539. Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
  1540. Score = 87.2 bits (45), Expect = 8e-17
  1541. Identities = 71/84 (85%), Gaps = 0/84 (0%)
  1542. Strand=Plus/Plus
  1543. Query 1667 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1726
  1544. ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
  1545. Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
  1546. Query 1727 ATCAAAGCTCACCCGTGGCACAAG 1750
  1547. || |||||||| || ||||| |||
  1548. Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
  1549. Score = 64.1 bits (33), Expect = 7e-10
  1550. Identities = 99/132 (75%), Gaps = 0/132 (0%)
  1551. Strand=Plus/Plus
  1552. Query 1472 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1531
  1553. ||||| || || || || || || |||||||| || | || || ||||||||||||||
  1554. Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
  1555. Query 1532 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1591
  1556. || || || ||||| | || |||||||| ||||| || || || |||||||| ||
  1557. Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
  1558. Query 1592 CTACTGGGACAG 1603
  1559. || || ||||||
  1560. Sbjct 1685453 CTTCTTGGACAG 1685464
  1561. Score = 60.3 bits (31), Expect = 1e-08
  1562. Identities = 49/58 (84%), Gaps = 0/58 (0%)
  1563. Strand=Plus/Plus
  1564. Query 1398 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1455
  1565. |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
  1566. Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
  1567. Score = 44.9 bits (23), Expect = 4e-04
  1568. Identities = 27/29 (93%), Gaps = 0/29 (0%)
  1569. Strand=Plus/Minus
  1570. Query 1538 GAGTACACCGCAGCAATTGATATCTGGTC 1566
  1571. ||||| || ||||||||||||||||||||
  1572. Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
  1573. Lambda K H
  1574. 1.33 0.621 1.12
  1575. Gapped
  1576. Lambda K H
  1577. 1.33 0.621 1.12
  1578. Effective search space used: 11848358857
  1579. <b>Query=</b> orange1.1g022797m PAC:18136225 (mRNA) Citrus sinensis
  1580. Length=2221
  1581. Score E
  1582. Sequences producing significant alignments: (Bits) Value
  1583. scaffold00001 length=5927163 <a href=#scaffold00001>1237</a> 0.0
  1584. >scaffold00001<a name=scaffold00001></a> length=5927163
  1585. Length=5927163
  1586. Score = 1237 bits (643), Expect = 0.0
  1587. Identities = 643/643 (100%), Gaps = 0/643 (0%)
  1588. Strand=Plus/Plus
  1589. Query 597 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 656
  1590. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1591. Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
  1592. Query 657 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG<font color="#000000">gtttacttttgtttttcagaaaatg</font> 716
  1593. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1594. Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAGGTTTACTTTTGTTTTTCAGAAAATG 4059539
  1595. Query 717 <font color="#000000">ctgttcagtttttatttgcttttt</font>CTTGTACTGATATGTGTGGCCTTCTTATTATTGTAG 776
  1596. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1597. Sbjct 4059540 CTGTTCAGTTTTTATTTGCTTTTTCTTGTACTGATATGTGTGGCCTTCTTATTATTGTAG 4059599
  1598. Query 777 ACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCCAG 836
  1599. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1600. Sbjct 4059600 ACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCCAG 4059659
  1601. Query 837 GTAATCTAGCTGCCGATTGGCAATCATAGTTGGGTCTTTTAAAACTCGGGGGTTGCATCT 896
  1602. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1603. Sbjct 4059660 GTAATCTAGCTGCCGATTGGCAATCATAGTTGGGTCTTTTAAAACTCGGGGGTTGCATCT 4059719
  1604. Query 897 GATTTTATGTTCGGTCAAGGTTTGGCATTCCTCTTATTCTGCTGCCTTTGTTGTGGGTTT 956
  1605. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1606. Sbjct 4059720 GATTTTATGTTCGGTCAAGGTTTGGCATTCCTCTTATTCTGCTGCCTTTGTTGTGGGTTT 4059779
  1607. Query 957 ACTTATACAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCA 1016
  1608. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1609. Sbjct 4059780 ACTTATACAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCA 4059839
  1610. Query 1017 GGACAAGAGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGT 1076
  1611. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1612. Sbjct 4059840 GGACAAGAGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGT 4059899
  1613. Query 1077 TGTGTCCCTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCT 1136
  1614. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1615. Sbjct 4059900 TGTGTCCCTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCT 4059959
  1616. Query 1137 TGTTCTTGAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAG 1196
  1617. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1618. Sbjct 4059960 TGTTCTTGAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAG 4060019
  1619. Query 1197 CCAAAGGATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1239
  1620. |||||||||||||||||||||||||||||||||||||||||||
  1621. Sbjct 4060020 CCAAAGGATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
  1622. Score = 848 bits (441), Expect = 0.0
  1623. Identities = 441/441 (100%), Gaps = 0/441 (0%)
  1624. Strand=Plus/Plus
  1625. Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
  1626. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1627. Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
  1628. Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
  1629. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1630. Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
  1631. Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
  1632. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1633. Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
  1634. Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
  1635. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1636. Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
  1637. Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
  1638. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1639. Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
  1640. Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
  1641. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1642. Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
  1643. Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
  1644. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1645. Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
  1646. Query 421 CAATTTTTTCACCCGATCGGT 441
  1647. |||||||||||||||||||||
  1648. Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
  1649. Score = 721 bits (375), Expect = 0.0
  1650. Identities = 375/375 (100%), Gaps = 0/375 (0%)
  1651. Strand=Plus/Plus
  1652. Query 1846 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1905
  1653. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1654. Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
  1655. Query 1906 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 1965
  1656. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1657. Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
  1658. Query 1966 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 2025
  1659. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1660. Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
  1661. Query 2026 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 2085
  1662. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1663. Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
  1664. Query 2086 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 2145
  1665. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1666. Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
  1667. Query 2146 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2205
  1668. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1669. Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
  1670. Query 2206 TTGGAAACCATATGT 2220
  1671. |||||||||||||||
  1672. Sbjct 4062182 TTGGAAACCATATGT 4062196
  1673. Score = 310 bits (161), Expect = 5e-84
  1674. Identities = 161/161 (100%), Gaps = 0/161 (0%)
  1675. Strand=Plus/Plus
  1676. Query 439 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 498
  1677. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1678. Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
  1679. Query 499 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 558
  1680. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1681. Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
  1682. Query 559 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 599
  1683. |||||||||||||||||||||||||||||||||||||||||
  1684. Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
  1685. Score = 273 bits (142), Expect = 5e-73
  1686. Identities = 142/142 (100%), Gaps = 0/142 (0%)
  1687. Strand=Plus/Plus
  1688. Query 1371 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1430
  1689. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1690. Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
  1691. Query 1431 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1490
  1692. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1693. Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
  1694. Query 1491 GGCTGAACTGCTACTGGGACAG 1512
  1695. ||||||||||||||||||||||
  1696. Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
  1697. Score = 198 bits (103), Expect = 2e-50
  1698. Identities = 103/103 (100%), Gaps = 0/103 (0%)
  1699. Strand=Plus/Plus
  1700. Query 1744 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1803
  1701. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1702. Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
  1703. Query 1804 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1846
  1704. |||||||||||||||||||||||||||||||||||||||||||
  1705. Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
  1706. Score = 189 bits (98), Expect = 1e-47
  1707. Identities = 98/98 (100%), Gaps = 0/98 (0%)
  1708. Strand=Plus/Plus
  1709. Query 1562 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1621
  1710. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1711. Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
  1712. Query 1622 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1659
  1713. ||||||||||||||||||||||||||||||||||||||
  1714. Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
  1715. Score = 166 bits (86), Expect = 1e-40
  1716. Identities = 86/86 (100%), Gaps = 0/86 (0%)
  1717. Strand=Plus/Plus
  1718. Query 1658 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1717
  1719. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1720. Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
  1721. Query 1718 ACTCTCCCAATCTTCGGAGCACAGCA 1743
  1722. ||||||||||||||||||||||||||
  1723. Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
  1724. Score = 162 bits (84), Expect = 2e-39
  1725. Identities = 152/186 (82%), Gaps = 0/186 (0%)
  1726. Strand=Plus/Plus
  1727. Query 964 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1023
  1728. |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
  1729. Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
  1730. Query 1024 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1083
  1731. || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
  1732. Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
  1733. Query 1084 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1143
  1734. ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
  1735. Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
  1736. Query 1144 GAGTAT 1149
  1737. ||||||
  1738. Sbjct 1684360 GAGTAT 1684365
  1739. Score = 154 bits (80), Expect = 4e-37
  1740. Identities = 80/80 (100%), Gaps = 0/80 (0%)
  1741. Strand=Plus/Plus
  1742. Query 1237 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1296
  1743. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1744. Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
  1745. Query 1297 AAGCCTCAAAATTTACTGGT 1316
  1746. ||||||||||||||||||||
  1747. Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
  1748. Score = 118 bits (61), Expect = 4e-26
  1749. Identities = 61/61 (100%), Gaps = 0/61 (0%)
  1750. Strand=Plus/Plus
  1751. Query 1314 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1373
  1752. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1753. Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
  1754. Query 1374 A 1374
  1755. |
  1756. Sbjct 4060539 A 4060539
  1757. Score = 108 bits (56), Expect = 3e-23
  1758. Identities = 56/56 (100%), Gaps = 0/56 (0%)
  1759. Strand=Plus/Plus
  1760. Query 1510 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1565
  1761. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1762. Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
  1763. Score = 87.2 bits (45), Expect = 7e-17
  1764. Identities = 71/84 (85%), Gaps = 0/84 (0%)
  1765. Strand=Plus/Plus
  1766. Query 1576 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1635
  1767. ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
  1768. Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
  1769. Query 1636 ATCAAAGCTCACCCGTGGCACAAG 1659
  1770. || |||||||| || ||||| |||
  1771. Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
  1772. Score = 64.2 bits (33), Expect = 6e-10
  1773. Identities = 99/132 (75%), Gaps = 0/132 (0%)
  1774. Strand=Plus/Plus
  1775. Query 1381 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1440
  1776. ||||| || || || || || || |||||||| || | || || ||||||||||||||
  1777. Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
  1778. Query 1441 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1500
  1779. || || || ||||| | || |||||||| ||||| || || || |||||||| ||
  1780. Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
  1781. Query 1501 CTACTGGGACAG 1512
  1782. || || ||||||
  1783. Sbjct 1685453 CTTCTTGGACAG 1685464
  1784. Score = 60.3 bits (31), Expect = 9e-09
  1785. Identities = 49/58 (84%), Gaps = 0/58 (0%)
  1786. Strand=Plus/Plus
  1787. Query 1307 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1364
  1788. |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
  1789. Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
  1790. Score = 44.9 bits (23), Expect = 4e-04
  1791. Identities = 27/29 (93%), Gaps = 0/29 (0%)
  1792. Strand=Plus/Minus
  1793. Query 1447 GAGTACACCGCAGCAATTGATATCTGGTC 1475
  1794. ||||| || ||||||||||||||||||||
  1795. Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
  1796. Lambda K H
  1797. 1.33 0.621 1.12
  1798. Gapped
  1799. Lambda K H
  1800. 1.33 0.621 1.12
  1801. Effective search space used: 11848358857
  1802. <b>Query=</b> orange1.1g017341m PAC:18136221 (mRNA) Citrus sinensis
  1803. Length=2397
  1804. Score E
  1805. Sequences producing significant alignments: (Bits) Value
  1806. scaffold00001 length=5927163 <a href=#scaffold00001>2029</a> 0.0
  1807. >scaffold00001<a name=scaffold00001></a> length=5927163
  1808. Length=5927163
  1809. Score = 2029 bits (1055), Expect = 0.0
  1810. Identities = 1055/1055 (100%), Gaps = 0/1055 (0%)
  1811. Strand=Plus/Plus
  1812. Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
  1813. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1814. Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
  1815. Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
  1816. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1817. Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
  1818. Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
  1819. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1820. Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
  1821. Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
  1822. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1823. Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
  1824. Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
  1825. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1826. Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
  1827. Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
  1828. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1829. Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
  1830. Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
  1831. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1832. Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
  1833. Query 421 CA<font color="#000000">attttttcacccgatcggtaattttcacattgtttctattacttttattttcttttcc</font> 480
  1834. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1835. Sbjct 4058880 CAATTTTTTCACCCGATCGGTAATTTTCACATTGTTTCTATTACTTTTATTTTCTTTTCC 4058939
  1836. Query 481 <font color="#000000">attttattattattattattatgtgcattttta</font>GATCTTTGCGGGTAAATAGATTGAAAC 540
  1837. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1838. Sbjct 4058940 ATTTTATTATTATTATTATTATGTGCATTTTTAGATCTTTGCGGGTAAATAGATTGAAAC 4058999
  1839. Query 541 TGTTAGCTTTGTAAAGTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGAT 600
  1840. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1841. Sbjct 4059000 TGTTAGCTTTGTAAAGTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGAT 4059059
  1842. Query 601 TTTGAGAGTAACCTGGTTTGATGTGAATGTGGATACCATTTACTATTTACTGAATTTTCT 660
  1843. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1844. Sbjct 4059060 TTTGAGAGTAACCTGGTTTGATGTGAATGTGGATACCATTTACTATTTACTGAATTTTCT 4059119
  1845. Query 661 GATGTGTCTTGTATTGATTTGCTTAAACCGCTGATTGTTACTGCTTCTGCAGGTGAGTTA 720
  1846. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1847. Sbjct 4059120 GATGTGTCTTGTATTGATTTGCTTAAACCGCTGATTGTTACTGCTTCTGCAGGTGAGTTA 4059179
  1848. Query 721 TTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTTAGAATGGC 780
  1849. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1850. Sbjct 4059180 TTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTTAGAATGGC 4059239
  1851. Query 781 TTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTACCCGAGGA 840
  1852. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1853. Sbjct 4059240 TTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTACCCGAGGA 4059299
  1854. Query 841 GATGAATGACATGAAAATTAGGGATGACAAGGTATATGA<font color="#000000">tttttttt</font>CTTCTTGTTGATT 900
  1855. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1856. Sbjct 4059300 GATGAATGACATGAAAATTAGGGATGACAAGGTATATGATTTTTTTTCTTCTTGTTGATT 4059359
  1857. Query 901 TTTTGCTGCTTCGTGACAATC<font color="#000000">tttttttttt</font>ACTTACTTGAAAGCTATTAAATTTTATGC 960
  1858. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1859. Sbjct 4059360 TTTTGCTGCTTCGTGACAATCTTTTTTTTTTACTTACTTGAAAGCTATTAAATTTTATGC 4059419
  1860. Query 961 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 1020
  1861. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1862. Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
  1863. Query 1021 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 1055
  1864. |||||||||||||||||||||||||||||||||||
  1865. Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
  1866. Score = 748 bits (389), Expect = 0.0
  1867. Identities = 389/389 (100%), Gaps = 0/389 (0%)
  1868. Strand=Plus/Plus
  1869. Query 1995 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 2054
  1870. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1871. Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
  1872. Query 2055 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 2114
  1873. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1874. Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
  1875. Query 2115 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 2174
  1876. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1877. Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
  1878. Query 2175 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 2234
  1879. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1880. Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
  1881. Query 2235 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 2294
  1882. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1883. Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
  1884. Query 2295 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2354
  1885. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1886. Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
  1887. Query 2355 TTGGAAACCATATGTTGTTTTCCTCCCAC 2383
  1888. |||||||||||||||||||||||||||||
  1889. Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
  1890. Score = 531 bits (276), Expect = 2e-150
  1891. Identities = 276/276 (100%), Gaps = 0/276 (0%)
  1892. Strand=Plus/Plus
  1893. Query 1113 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1172
  1894. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1895. Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
  1896. Query 1173 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1232
  1897. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1898. Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
  1899. Query 1233 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1292
  1900. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1901. Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
  1902. Query 1293 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 1352
  1903. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1904. Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
  1905. Query 1353 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1388
  1906. ||||||||||||||||||||||||||||||||||||
  1907. Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
  1908. Score = 273 bits (142), Expect = 6e-73
  1909. Identities = 142/142 (100%), Gaps = 0/142 (0%)
  1910. Strand=Plus/Plus
  1911. Query 1520 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1579
  1912. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1913. Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
  1914. Query 1580 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1639
  1915. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1916. Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
  1917. Query 1640 GGCTGAACTGCTACTGGGACAG 1661
  1918. ||||||||||||||||||||||
  1919. Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
  1920. Score = 198 bits (103), Expect = 2e-50
  1921. Identities = 103/103 (100%), Gaps = 0/103 (0%)
  1922. Strand=Plus/Plus
  1923. Query 1893 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1952
  1924. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1925. Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
  1926. Query 1953 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1995
  1927. |||||||||||||||||||||||||||||||||||||||||||
  1928. Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
  1929. Score = 189 bits (98), Expect = 2e-47
  1930. Identities = 98/98 (100%), Gaps = 0/98 (0%)
  1931. Strand=Plus/Plus
  1932. Query 1711 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1770
  1933. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1934. Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
  1935. Query 1771 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1808
  1936. ||||||||||||||||||||||||||||||||||||||
  1937. Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
  1938. Score = 166 bits (86), Expect = 1e-40
  1939. Identities = 86/86 (100%), Gaps = 0/86 (0%)
  1940. Strand=Plus/Plus
  1941. Query 1807 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1866
  1942. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1943. Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
  1944. Query 1867 ACTCTCCCAATCTTCGGAGCACAGCA 1892
  1945. ||||||||||||||||||||||||||
  1946. Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
  1947. Score = 162 bits (84), Expect = 2e-39
  1948. Identities = 152/186 (82%), Gaps = 0/186 (0%)
  1949. Strand=Plus/Plus
  1950. Query 1113 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1172
  1951. |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
  1952. Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
  1953. Query 1173 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1232
  1954. || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
  1955. Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
  1956. Query 1233 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1292
  1957. ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
  1958. Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
  1959. Query 1293 GAGTAT 1298
  1960. ||||||
  1961. Sbjct 1684360 GAGTAT 1684365
  1962. Score = 154 bits (80), Expect = 4e-37
  1963. Identities = 80/80 (100%), Gaps = 0/80 (0%)
  1964. Strand=Plus/Plus
  1965. Query 1386 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1445
  1966. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1967. Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
  1968. Query 1446 AAGCCTCAAAATTTACTGGT 1465
  1969. ||||||||||||||||||||
  1970. Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
  1971. Score = 121 bits (63), Expect = 3e-27
  1972. Identities = 63/63 (100%), Gaps = 0/63 (0%)
  1973. Strand=Plus/Plus
  1974. Query 1054 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 1113
  1975. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1976. Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
  1977. Query 1114 AGG 1116
  1978. |||
  1979. Sbjct 4059658 AGG 4059660
  1980. Score = 117 bits (61), Expect = 4e-26
  1981. Identities = 61/61 (100%), Gaps = 0/61 (0%)
  1982. Strand=Plus/Plus
  1983. Query 1463 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1522
  1984. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1985. Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
  1986. Query 1523 A 1523
  1987. |
  1988. Sbjct 4060539 A 4060539
  1989. Score = 108 bits (56), Expect = 3e-23
  1990. Identities = 56/56 (100%), Gaps = 0/56 (0%)
  1991. Strand=Plus/Plus
  1992. Query 1659 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1714
  1993. ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  1994. Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
  1995. Score = 87.2 bits (45), Expect = 8e-17
  1996. Identities = 71/84 (85%), Gaps = 0/84 (0%)
  1997. Strand=Plus/Plus
  1998. Query 1725 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1784
  1999. ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
  2000. Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
  2001. Query 1785 ATCAAAGCTCACCCGTGGCACAAG 1808
  2002. || |||||||| || ||||| |||
  2003. Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
  2004. Score = 64.1 bits (33), Expect = 7e-10
  2005. Identities = 99/132 (75%), Gaps = 0/132 (0%)
  2006. Strand=Plus/Plus
  2007. Query 1530 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1589
  2008. ||||| || || || || || || |||||||| || | || || ||||||||||||||
  2009. Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
  2010. Query 1590 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1649
  2011. || || || ||||| | || |||||||| ||||| || || || |||||||| ||
  2012. Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
  2013. Query 1650 CTACTGGGACAG 1661
  2014. || || ||||||
  2015. Sbjct 1685453 CTTCTTGGACAG 1685464
  2016. Score = 60.3 bits (31), Expect = 1e-08
  2017. Identities = 49/58 (84%), Gaps = 0/58 (0%)
  2018. Strand=Plus/Plus
  2019. Query 1456 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1513
  2020. |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
  2021. Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
  2022. Score = 44.9 bits (23), Expect = 4e-04
  2023. Identities = 27/29 (93%), Gaps = 0/29 (0%)
  2024. Strand=Plus/Minus
  2025. Query 1596 GAGTACACCGCAGCAATTGATATCTGGTC 1624
  2026. ||||| || ||||||||||||||||||||
  2027. Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
  2028. Lambda K H
  2029. 1.33 0.621 1.12
  2030. Gapped
  2031. Lambda K H
  2032. 1.33 0.621 1.12
  2033. Effective search space used: 11848358857
  2034. Database: Citrus_sinensis-scaffold00001.fasta
  2035. Posted date: Jun 10, 2018 8:23 PM
  2036. Number of letters in database: 5,927,163
  2037. Number of sequences in database: 1
  2038. Matrix: blastn matrix 1 -2
  2039. Gap Penalties: Existence: 5, Extension: 2
  2040. </PRE>
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  2042. </HTML>