123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133134135136137138139140141142143144145146147148149150151152153154155156157158159160161162163164165166167168169170171172173174175176177178179180181182183184185186187188189190191192193194195196197198199200201202203204205206207208209210211212213214215216217218219220221222223224225226227228229230231232233234235236237238239240241242243244245246247248249250251252253254255256257258259260261262263264265266267268269270271272273274275276277278279280281282283284285286287288289290291292293294295296297298299300301302303304305306307308309310311312313314315316317318319320321322323324325326327328329330331332333334335336337338339340341342343344345346347348349350351352353354355356357358359360361362363364365366367368369370371372373374375376377378379380381382383384385386387388389390391392393394395396397398399400401402403404405406407408409410411412413414415416417418419420421422423424425426427428429430431432433434435436437438439440441442443444445446447448449450451452453454455456457458459460461462463464465466467468469470471472473474475476477478479480481482483484485486487488489490491492493494495496497498499500501502503504505506507508509510511512513514515516517518519520521522523524525526527528529530531532533534535536537538539540541542543544545546547548549550551552553554555556557558559560561562563564565566567568569570571572573574575576577578579580581582583584585586587588589590591592593594595596597598599600601602603604605606607608609610611612613614615616617618619620621622623624625626627628629630631632633634635636637638639640641642643644645646647648649650651652653654655656657658659660661662663664665666667668669670671672673674675676677678679680681682683684685686687688689690691692693694695696697698699700701702703704705706707708709710711712713714715716717718719720721722723724725726727728729730731732733734735736737738739740741742743744745746747748749750751752753754755756757758759760761762763764765766767768769770771772773774775776777778779780781782783784785786787788789790791792793794795796797798799800801802803804805806807808809810811812813814815816817818819820821822823824825826827828829830831832833834835836837838839840841842843844845846847848849850851852853854855856857858859860861862863864865866867868869870871872873874875876877878879880881882883884885886887888889890891892893894895896897898899900901902903904905906907908909910911912913914915916917918919920921922923924925926927928929930931932933934935936937938939940941942943944945946947948949950951952953954955956957958959960961962963964965966967968969970971972973974975976977978979980981982983984985986987988989990991992993994995996997998999100010011002100310041005100610071008100910101011101210131014101510161017101810191020102110221023102410251026102710281029103010311032103310341035103610371038103910401041104210431044104510461047104810491050105110521053105410551056105710581059106010611062106310641065106610671068106910701071107210731074107510761077107810791080108110821083108410851086108710881089109010911092109310941095109610971098109911001101110211031104110511061107110811091110111111121113111411151116111711181119112011211122112311241125112611271128112911301131113211331134113511361137113811391140114111421143114411451146114711481149115011511152115311541155115611571158115911601161116211631164116511661167116811691170117111721173117411751176117711781179118011811182118311841185118611871188118911901191119211931194119511961197119811991200120112021203120412051206120712081209121012111212121312141215121612171218121912201221122212231224122512261227122812291230123112321233123412351236123712381239124012411242124312441245124612471248124912501251125212531254125512561257125812591260126112621263126412651266126712681269127012711272127312741275127612771278127912801281128212831284128512861287128812891290129112921293129412951296129712981299130013011302130313041305130613071308130913101311131213131314131513161317131813191320132113221323132413251326132713281329133013311332133313341335133613371338133913401341134213431344134513461347134813491350135113521353135413551356135713581359136013611362136313641365136613671368136913701371137213731374137513761377137813791380138113821383138413851386138713881389139013911392139313941395139613971398139914001401140214031404140514061407140814091410141114121413141414151416141714181419142014211422142314241425142614271428142914301431143214331434143514361437143814391440144114421443144414451446144714481449145014511452145314541455145614571458145914601461146214631464146514661467146814691470147114721473147414751476147714781479148014811482148314841485148614871488148914901491149214931494149514961497149814991500150115021503150415051506150715081509151015111512151315141515151615171518151915201521152215231524152515261527152815291530153115321533153415351536153715381539154015411542154315441545154615471548154915501551155215531554155515561557155815591560156115621563156415651566156715681569157015711572157315741575157615771578157915801581158215831584158515861587158815891590159115921593159415951596159715981599160016011602160316041605160616071608160916101611161216131614161516161617161816191620162116221623162416251626162716281629163016311632163316341635163616371638163916401641164216431644164516461647164816491650165116521653165416551656165716581659166016611662166316641665166616671668166916701671167216731674167516761677167816791680168116821683168416851686168716881689169016911692169316941695169616971698169917001701170217031704170517061707170817091710171117121713171417151716171717181719172017211722172317241725172617271728172917301731173217331734173517361737173817391740174117421743174417451746174717481749175017511752175317541755175617571758175917601761176217631764176517661767176817691770177117721773177417751776177717781779178017811782178317841785178617871788178917901791179217931794179517961797179817991800180118021803180418051806180718081809181018111812181318141815181618171818181918201821182218231824182518261827182818291830183118321833183418351836183718381839184018411842184318441845184618471848184918501851185218531854185518561857185818591860186118621863186418651866186718681869187018711872187318741875187618771878187918801881188218831884188518861887188818891890189118921893189418951896189718981899190019011902190319041905190619071908190919101911191219131914191519161917191819191920192119221923192419251926192719281929193019311932193319341935193619371938193919401941194219431944194519461947194819491950195119521953195419551956195719581959196019611962196319641965196619671968196919701971197219731974197519761977197819791980198119821983198419851986198719881989199019911992199319941995199619971998199920002001200220032004200520062007200820092010201120122013201420152016201720182019202020212022202320242025202620272028202920302031203220332034203520362037203820392040204120422043204420452046204720482049205020512052205320542055205620572058205920602061206220632064206520662067206820692070207120722073207420752076207720782079208020812082208320842085208620872088208920902091209220932094209520962097209820992100210121022103210421052106210721082109211021112112211321142115211621172118211921202121212221232124212521262127212821292130213121322133213421352136213721382139214021412142214321442145214621472148214921502151215221532154215521562157215821592160216121622163216421652166216721682169217021712172217321742175217621772178217921802181218221832184218521862187218821892190219121922193219421952196219721982199220022012202220322042205220622072208220922102211221222132214221522162217221822192220222122222223222422252226222722282229223022312232223322342235223622372238223922402241224222432244224522462247224822492250225122522253225422552256225722582259226022612262226322642265226622672268226922702271227222732274227522762277227822792280228122822283228422852286228722882289229022912292229322942295229622972298229923002301230223032304230523062307230823092310231123122313231423152316231723182319232023212322232323242325232623272328232923302331233223332334233523362337233823392340234123422343234423452346234723482349235023512352235323542355235623572358235923602361236223632364236523662367236823692370237123722373237423752376237723782379238023812382238323842385238623872388238923902391239223932394239523962397239823992400240124022403240424052406240724082409241024112412241324142415241624172418241924202421242224232424242524262427242824292430243124322433243424352436243724382439244024412442244324442445244624472448244924502451245224532454245524562457245824592460246124622463246424652466246724682469247024712472247324742475247624772478247924802481248224832484248524862487248824892490249124922493249424952496249724982499250025012502250325042505250625072508250925102511251225132514251525162517251825192520252125222523252425252526252725282529253025312532253325342535253625372538253925402541254225432544254525462547254825492550255125522553255425552556255725582559256025612562256325642565256625672568256925702571257225732574257525762577257825792580258125822583258425852586258725882589259025912592259325942595259625972598259926002601260226032604260526062607260826092610261126122613261426152616261726182619262026212622262326242625262626272628262926302631263226332634263526362637263826392640264126422643264426452646264726482649265026512652265326542655265626572658265926602661266226632664266526662667266826692670267126722673267426752676267726782679268026812682268326842685268626872688268926902691269226932694269526962697269826992700270127022703270427052706270727082709271027112712271327142715271627172718271927202721272227232724272527262727272827292730273127322733273427352736273727382739274027412742274327442745274627472748274927502751275227532754275527562757275827592760276127622763276427652766276727682769277027712772277327742775277627772778277927802781278227832784278527862787278827892790279127922793279427952796279727982799280028012802280328042805280628072808280928102811281228132814281528162817281828192820282128222823282428252826282728282829283028312832283328342835283628372838283928402841284228432844284528462847284828492850285128522853285428552856285728582859286028612862286328642865286628672868286928702871287228732874287528762877287828792880288128822883288428852886288728882889289028912892289328942895289628972898289929002901290229032904290529062907290829092910291129122913291429152916291729182919292029212922292329242925292629272928292929302931293229332934 |
- <HTML>
- <TITLE>BLAST Search Results</TITLE>
- <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
- <PRE>
- <b>BLASTN 2.6.0+</b>
- <b><a
- href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=R
- etrieve&list_uids=10890397&dopt=Citation">Reference</a>:</b>
- Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
- "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
- 7(1-2):203-14.
- Database: Citrus_sinensis-scaffold00001.fasta
- 1 sequences; 5,927,163 total letters
- <b>Query=</b> orange1.1g015632m PAC:18136217 (mRNA) Citrus sinensis
- Length=2075
- Score E
- Sequences producing significant alignments: (Bits) Value
- scaffold00001 length=5927163 <a href=#scaffold00001>848</a> 0.0
- >scaffold00001<a name=scaffold00001></a> length=5927163
- Length=5927163
- Score = 848 bits (441), Expect = 0.0
- Identities = 441/441 (100%), Gaps = 0/441 (0%)
- Strand=Plus/Plus
- Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
- Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
- Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
- Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
- Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
- Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
- Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
- Query 421 CAATTTTTTCACCCGATCGGT 441
- |||||||||||||||||||||
- Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
- Score = 748 bits (389), Expect = 0.0
- Identities = 389/389 (100%), Gaps = 0/389 (0%)
- Strand=Plus/Plus
- Query 1687 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1746
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
- Query 1747 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 1806
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
- Query 1807 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 1866
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
- Query 1867 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 1926
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
- Query 1927 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 1986
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
- Query 1987 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2046
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
- Query 2047 TTGGAAACCATATGTTGTTTTCCTCCCAC 2075
- |||||||||||||||||||||||||||||
- Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
- Score = 531 bits (276), Expect = 1e-150
- Identities = 276/276 (100%), Gaps = 0/276 (0%)
- Strand=Plus/Plus
- Query 805 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 864
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
- Query 865 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 924
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
- Query 925 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 984
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
- Query 985 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 1044
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
- Query 1045 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1080
- ||||||||||||||||||||||||||||||||||||
- Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
- Score = 310 bits (161), Expect = 5e-84
- Identities = 161/161 (100%), Gaps = 0/161 (0%)
- Strand=Plus/Plus
- Query 495 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 554
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
- Query 555 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 614
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
- Query 615 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 655
- |||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
- Score = 273 bits (142), Expect = 5e-73
- Identities = 142/142 (100%), Gaps = 0/142 (0%)
- Strand=Plus/Plus
- Query 1212 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1271
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
- Query 1272 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1331
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
- Query 1332 GGCTGAACTGCTACTGGGACAG 1353
- ||||||||||||||||||||||
- Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
- Score = 198 bits (103), Expect = 2e-50
- Identities = 103/103 (100%), Gaps = 0/103 (0%)
- Strand=Plus/Plus
- Query 1585 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1644
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
- Query 1645 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1687
- |||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
- Score = 189 bits (98), Expect = 1e-47
- Identities = 98/98 (100%), Gaps = 0/98 (0%)
- Strand=Plus/Plus
- Query 1403 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1462
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
- Query 1463 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1500
- ||||||||||||||||||||||||||||||||||||||
- Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
- Score = 183 bits (95), Expect = 8e-46
- Identities = 95/95 (100%), Gaps = 0/95 (0%)
- Strand=Plus/Plus
- Query 653 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 712
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
- Query 713 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 747
- |||||||||||||||||||||||||||||||||||
- Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
- Score = 166 bits (86), Expect = 1e-40
- Identities = 86/86 (100%), Gaps = 0/86 (0%)
- Strand=Plus/Plus
- Query 1499 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1558
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
- Query 1559 ACTCTCCCAATCTTCGGAGCACAGCA 1584
- ||||||||||||||||||||||||||
- Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
- Score = 162 bits (84), Expect = 2e-39
- Identities = 152/186 (82%), Gaps = 0/186 (0%)
- Strand=Plus/Plus
- Query 805 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 864
- |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
- Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
- Query 865 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 924
- || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
- Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
- Query 925 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 984
- ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
- Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
- Query 985 GAGTAT 990
- ||||||
- Sbjct 1684360 GAGTAT 1684365
- Score = 154 bits (80), Expect = 4e-37
- Identities = 80/80 (100%), Gaps = 0/80 (0%)
- Strand=Plus/Plus
- Query 1078 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1137
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
- Query 1138 AAGCCTCAAAATTTACTGGT 1157
- ||||||||||||||||||||
- Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
- Score = 121 bits (63), Expect = 3e-27
- Identities = 63/63 (100%), Gaps = 0/63 (0%)
- Strand=Plus/Plus
- Query 746 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 805
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
- Query 806 AGG 808
- |||
- Sbjct 4059658 AGG 4059660
- Score = 117 bits (61), Expect = 4e-26
- Identities = 61/61 (100%), Gaps = 0/61 (0%)
- Strand=Plus/Plus
- Query 1155 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1214
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
- Query 1215 A 1215
- |
- Sbjct 4060539 A 4060539
- Score = 114 bits (59), Expect = 5e-25
- Identities = 59/59 (100%), Gaps = 0/59 (0%)
- Strand=Plus/Plus
- Query 439 GGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGATTTTGAGAGTAACCTGGT 497
- |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059018 GGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGATTTTGAGAGTAACCTGGT 4059076
- Score = 108 bits (56), Expect = 3e-23
- Identities = 56/56 (100%), Gaps = 0/56 (0%)
- Strand=Plus/Plus
- Query 1351 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1406
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
- Score = 87.2 bits (45), Expect = 7e-17
- Identities = 71/84 (85%), Gaps = 0/84 (0%)
- Strand=Plus/Plus
- Query 1417 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1476
- ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
- Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
- Query 1477 ATCAAAGCTCACCCGTGGCACAAG 1500
- || |||||||| || ||||| |||
- Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
- Score = 64.1 bits (33), Expect = 6e-10
- Identities = 99/132 (75%), Gaps = 0/132 (0%)
- Strand=Plus/Plus
- Query 1222 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1281
- ||||| || || || || || || |||||||| || | || || ||||||||||||||
- Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
- Query 1282 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1341
- || || || ||||| | || |||||||| ||||| || || || |||||||| ||
- Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
- Query 1342 CTACTGGGACAG 1353
- || || ||||||
- Sbjct 1685453 CTTCTTGGACAG 1685464
- Score = 60.3 bits (31), Expect = 9e-09
- Identities = 49/58 (84%), Gaps = 0/58 (0%)
- Strand=Plus/Plus
- Query 1148 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1205
- |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
- Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
- Score = 44.9 bits (23), Expect = 4e-04
- Identities = 27/29 (93%), Gaps = 0/29 (0%)
- Strand=Plus/Minus
- Query 1288 GAGTACACCGCAGCAATTGATATCTGGTC 1316
- ||||| || ||||||||||||||||||||
- Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
- Lambda K H
- 1.33 0.621 1.12
- Gapped
- Lambda K H
- 1.33 0.621 1.12
- Effective search space used: 12180278865
- <b>Query=</b> orange1.1g015662m PAC:18136220 (mRNA) Citrus sinensis
- Length=2292
- Score E
- Sequences producing significant alignments: (Bits) Value
- scaffold00001 length=5927163 <a href=#scaffold00001>1677</a> 0.0
- >scaffold00001<a name=scaffold00001></a> length=5927163
- Length=5927163
- Score = 1677 bits (872), Expect = 0.0
- Identities = 872/872 (100%), Gaps = 0/872 (0%)
- Strand=Plus/Plus
- Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
- Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
- Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
- Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
- Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
- Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
- Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
- Query 421 CA<font color="#000000">attttttcacccgatcggtaattttcacattgtttctattacttttattttcttttcc</font> 480
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058880 CAATTTTTTCACCCGATCGGTAATTTTCACATTGTTTCTATTACTTTTATTTTCTTTTCC 4058939
- Query 481 <font color="#000000">attttattattattattattatgtgcattttta</font>GATCTTTGCGGGTAAATAGATTGAAAC 540
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058940 ATTTTATTATTATTATTATTATGTGCATTTTTAGATCTTTGCGGGTAAATAGATTGAAAC 4058999
- Query 541 TGTTAGCTTTGTAAAGTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGAT 600
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059000 TGTTAGCTTTGTAAAGTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGAT 4059059
- Query 601 TTTGAGAGTAACCTGGTTTGATGTGAATGTGGATACCATTTACTATTTACTGAATTTTCT 660
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059060 TTTGAGAGTAACCTGGTTTGATGTGAATGTGGATACCATTTACTATTTACTGAATTTTCT 4059119
- Query 661 GATGTGTCTTGTATTGATTTGCTTAAACCGCTGATTGTTACTGCTTCTGCAGGTGAGTTA 720
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059120 GATGTGTCTTGTATTGATTTGCTTAAACCGCTGATTGTTACTGCTTCTGCAGGTGAGTTA 4059179
- Query 721 TTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTTAGAATGGC 780
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059180 TTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTTAGAATGGC 4059239
- Query 781 TTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTACCCGAGGA 840
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059240 TTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTACCCGAGGA 4059299
- Query 841 GATGAATGACATGAAAATTAGGGATGACAAGG 872
- ||||||||||||||||||||||||||||||||
- Sbjct 4059300 GATGAATGACATGAAAATTAGGGATGACAAGG 4059331
- Score = 748 bits (389), Expect = 0.0
- Identities = 389/389 (100%), Gaps = 0/389 (0%)
- Strand=Plus/Plus
- Query 1904 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1963
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
- Query 1964 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 2023
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
- Query 2024 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 2083
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
- Query 2084 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 2143
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
- Query 2144 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 2203
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
- Query 2204 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2263
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
- Query 2264 TTGGAAACCATATGTTGTTTTCCTCCCAC 2292
- |||||||||||||||||||||||||||||
- Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
- Score = 531 bits (276), Expect = 2e-150
- Identities = 276/276 (100%), Gaps = 0/276 (0%)
- Strand=Plus/Plus
- Query 1022 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1081
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
- Query 1082 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1141
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
- Query 1142 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1201
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
- Query 1202 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 1261
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
- Query 1262 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1297
- ||||||||||||||||||||||||||||||||||||
- Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
- Score = 273 bits (142), Expect = 5e-73
- Identities = 142/142 (100%), Gaps = 0/142 (0%)
- Strand=Plus/Plus
- Query 1429 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1488
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
- Query 1489 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1548
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
- Query 1549 GGCTGAACTGCTACTGGGACAG 1570
- ||||||||||||||||||||||
- Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
- Score = 198 bits (103), Expect = 2e-50
- Identities = 103/103 (100%), Gaps = 0/103 (0%)
- Strand=Plus/Plus
- Query 1802 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1861
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
- Query 1862 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1904
- |||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
- Score = 189 bits (98), Expect = 2e-47
- Identities = 98/98 (100%), Gaps = 0/98 (0%)
- Strand=Plus/Plus
- Query 1620 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1679
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
- Query 1680 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1717
- ||||||||||||||||||||||||||||||||||||||
- Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
- Score = 183 bits (95), Expect = 9e-46
- Identities = 95/95 (100%), Gaps = 0/95 (0%)
- Strand=Plus/Plus
- Query 870 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 929
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
- Query 930 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 964
- |||||||||||||||||||||||||||||||||||
- Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
- Score = 166 bits (86), Expect = 1e-40
- Identities = 86/86 (100%), Gaps = 0/86 (0%)
- Strand=Plus/Plus
- Query 1716 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1775
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
- Query 1776 ACTCTCCCAATCTTCGGAGCACAGCA 1801
- ||||||||||||||||||||||||||
- Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
- Score = 162 bits (84), Expect = 2e-39
- Identities = 152/186 (82%), Gaps = 0/186 (0%)
- Strand=Plus/Plus
- Query 1022 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1081
- |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
- Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
- Query 1082 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1141
- || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
- Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
- Query 1142 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1201
- ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
- Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
- Query 1202 GAGTAT 1207
- ||||||
- Sbjct 1684360 GAGTAT 1684365
- Score = 154 bits (80), Expect = 4e-37
- Identities = 80/80 (100%), Gaps = 0/80 (0%)
- Strand=Plus/Plus
- Query 1295 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1354
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
- Query 1355 AAGCCTCAAAATTTACTGGT 1374
- ||||||||||||||||||||
- Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
- Score = 121 bits (63), Expect = 3e-27
- Identities = 63/63 (100%), Gaps = 0/63 (0%)
- Strand=Plus/Plus
- Query 963 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 1022
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
- Query 1023 AGG 1025
- |||
- Sbjct 4059658 AGG 4059660
- Score = 117 bits (61), Expect = 4e-26
- Identities = 61/61 (100%), Gaps = 0/61 (0%)
- Strand=Plus/Plus
- Query 1372 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1431
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
- Query 1432 A 1432
- |
- Sbjct 4060539 A 4060539
- Score = 108 bits (56), Expect = 3e-23
- Identities = 56/56 (100%), Gaps = 0/56 (0%)
- Strand=Plus/Plus
- Query 1568 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1623
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
- Score = 87.2 bits (45), Expect = 8e-17
- Identities = 71/84 (85%), Gaps = 0/84 (0%)
- Strand=Plus/Plus
- Query 1634 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1693
- ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
- Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
- Query 1694 ATCAAAGCTCACCCGTGGCACAAG 1717
- || |||||||| || ||||| |||
- Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
- Score = 64.1 bits (33), Expect = 7e-10
- Identities = 99/132 (75%), Gaps = 0/132 (0%)
- Strand=Plus/Plus
- Query 1439 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1498
- ||||| || || || || || || |||||||| || | || || ||||||||||||||
- Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
- Query 1499 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1558
- || || || ||||| | || |||||||| ||||| || || || |||||||| ||
- Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
- Query 1559 CTACTGGGACAG 1570
- || || ||||||
- Sbjct 1685453 CTTCTTGGACAG 1685464
- Score = 60.3 bits (31), Expect = 1e-08
- Identities = 49/58 (84%), Gaps = 0/58 (0%)
- Strand=Plus/Plus
- Query 1365 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1422
- |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
- Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
- Score = 44.9 bits (23), Expect = 4e-04
- Identities = 27/29 (93%), Gaps = 0/29 (0%)
- Strand=Plus/Minus
- Query 1505 GAGTACACCGCAGCAATTGATATCTGGTC 1533
- ||||| || ||||||||||||||||||||
- Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
- Lambda K H
- 1.33 0.621 1.12
- Gapped
- Lambda K H
- 1.33 0.621 1.12
- Effective search space used: 12180278865
- <b>Query=</b> orange1.1g018514m PAC:18136222 (mRNA) Citrus sinensis
- Length=2029
- Score E
- Sequences producing significant alignments: (Bits) Value
- scaffold00001 length=5927163 <a href=#scaffold00001>848</a> 0.0
- >scaffold00001<a name=scaffold00001></a> length=5927163
- Length=5927163
- Score = 848 bits (441), Expect = 0.0
- Identities = 441/441 (100%), Gaps = 0/441 (0%)
- Strand=Plus/Plus
- Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
- Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
- Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
- Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
- Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
- Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
- Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
- Query 421 CAATTTTTTCACCCGATCGGT 441
- |||||||||||||||||||||
- Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
- Score = 748 bits (389), Expect = 0.0
- Identities = 389/389 (100%), Gaps = 0/389 (0%)
- Strand=Plus/Plus
- Query 1641 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1700
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
- Query 1701 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 1760
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
- Query 1761 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 1820
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
- Query 1821 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 1880
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
- Query 1881 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 1940
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
- Query 1941 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2000
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
- Query 2001 TTGGAAACCATATGTTGTTTTCCTCCCAC 2029
- |||||||||||||||||||||||||||||
- Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
- Score = 531 bits (276), Expect = 1e-150
- Identities = 276/276 (100%), Gaps = 0/276 (0%)
- Strand=Plus/Plus
- Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
- Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
- Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
- Query 929 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 988
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
- Query 989 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1024
- ||||||||||||||||||||||||||||||||||||
- Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
- Score = 310 bits (161), Expect = 5e-84
- Identities = 161/161 (100%), Gaps = 0/161 (0%)
- Strand=Plus/Plus
- Query 439 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 498
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
- Query 499 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 558
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
- Query 559 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 599
- |||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
- Score = 273 bits (142), Expect = 5e-73
- Identities = 142/142 (100%), Gaps = 0/142 (0%)
- Strand=Plus/Plus
- Query 1156 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1215
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
- Query 1216 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1275
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
- Query 1276 GGCTGAACTGCTACTGGGACAG 1297
- ||||||||||||||||||||||
- Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
- Score = 217 bits (113), Expect = 3e-56
- Identities = 113/113 (100%), Gaps = 0/113 (0%)
- Strand=Plus/Plus
- Query 1529 TTTGATGCAGTTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATAC 1588
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061607 TTTGATGCAGTTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATAC 4061666
- Query 1589 CCGACTCCCAAATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1641
- |||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061667 CCGACTCCCAAATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
- Score = 189 bits (98), Expect = 1e-47
- Identities = 98/98 (100%), Gaps = 0/98 (0%)
- Strand=Plus/Plus
- Query 1347 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1406
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
- Query 1407 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1444
- ||||||||||||||||||||||||||||||||||||||
- Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
- Score = 183 bits (95), Expect = 8e-46
- Identities = 95/95 (100%), Gaps = 0/95 (0%)
- Strand=Plus/Plus
- Query 597 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 656
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
- Query 657 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 691
- |||||||||||||||||||||||||||||||||||
- Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
- Score = 166 bits (86), Expect = 1e-40
- Identities = 86/86 (100%), Gaps = 0/86 (0%)
- Strand=Plus/Plus
- Query 1443 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1502
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
- Query 1503 ACTCTCCCAATCTTCGGAGCACAGCA 1528
- ||||||||||||||||||||||||||
- Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
- Score = 162 bits (84), Expect = 2e-39
- Identities = 152/186 (82%), Gaps = 0/186 (0%)
- Strand=Plus/Plus
- Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
- |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
- Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
- Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
- || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
- Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
- Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
- ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
- Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
- Query 929 GAGTAT 934
- ||||||
- Sbjct 1684360 GAGTAT 1684365
- Score = 154 bits (80), Expect = 4e-37
- Identities = 80/80 (100%), Gaps = 0/80 (0%)
- Strand=Plus/Plus
- Query 1022 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1081
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
- Query 1082 AAGCCTCAAAATTTACTGGT 1101
- ||||||||||||||||||||
- Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
- Score = 121 bits (63), Expect = 3e-27
- Identities = 63/63 (100%), Gaps = 0/63 (0%)
- Strand=Plus/Plus
- Query 690 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 749
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
- Query 750 AGG 752
- |||
- Sbjct 4059658 AGG 4059660
- Score = 117 bits (61), Expect = 4e-26
- Identities = 61/61 (100%), Gaps = 0/61 (0%)
- Strand=Plus/Plus
- Query 1099 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1158
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
- Query 1159 A 1159
- |
- Sbjct 4060539 A 4060539
- Score = 108 bits (56), Expect = 3e-23
- Identities = 56/56 (100%), Gaps = 0/56 (0%)
- Strand=Plus/Plus
- Query 1295 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1350
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
- Score = 87.2 bits (45), Expect = 7e-17
- Identities = 71/84 (85%), Gaps = 0/84 (0%)
- Strand=Plus/Plus
- Query 1361 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1420
- ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
- Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
- Query 1421 ATCAAAGCTCACCCGTGGCACAAG 1444
- || |||||||| || ||||| |||
- Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
- Score = 64.1 bits (33), Expect = 6e-10
- Identities = 99/132 (75%), Gaps = 0/132 (0%)
- Strand=Plus/Plus
- Query 1166 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1225
- ||||| || || || || || || |||||||| || | || || ||||||||||||||
- Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
- Query 1226 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1285
- || || || ||||| | || |||||||| ||||| || || || |||||||| ||
- Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
- Query 1286 CTACTGGGACAG 1297
- || || ||||||
- Sbjct 1685453 CTTCTTGGACAG 1685464
- Score = 60.3 bits (31), Expect = 8e-09
- Identities = 49/58 (84%), Gaps = 0/58 (0%)
- Strand=Plus/Plus
- Query 1092 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1149
- |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
- Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
- Score = 44.9 bits (23), Expect = 4e-04
- Identities = 27/29 (93%), Gaps = 0/29 (0%)
- Strand=Plus/Minus
- Query 1232 GAGTACACCGCAGCAATTGATATCTGGTC 1260
- ||||| || ||||||||||||||||||||
- Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
- Lambda K H
- 1.33 0.621 1.12
- Gapped
- Lambda K H
- 1.33 0.621 1.12
- Effective search space used: 12180278865
- Database: Citrus_sinensis-scaffold00001.fasta
- Posted date: Jun 10, 2018 8:23 PM
- Number of letters in database: 5,927,163
- Number of sequences in database: 1
- Matrix: blastn matrix 1 -2
- Gap Penalties: Existence: 5, Extension: 2
- </PRE>
- </BODY>
- </HTML>
- <HTML>
- <TITLE>BLAST Search Results</TITLE>
- <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
- <PRE>
- <b>BLASTN 2.6.0+</b>
- <b><a
- href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=R
- etrieve&list_uids=10890397&dopt=Citation">Reference</a>:</b>
- Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
- "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
- 7(1-2):203-14.
- Database: Citrus_sinensis-scaffold00001.fasta
- 1 sequences; 5,927,163 total letters
- <b>Query=</b> orange1.1g015615m PAC:18136219 (mRNA) Citrus sinensis
- Length=2019
- Score E
- Sequences producing significant alignments: (Bits) Value
- scaffold00001 length=5927163 <a href=#scaffold00001>848</a> 0.0
- >scaffold00001<a name=scaffold00001></a> length=5927163
- Length=5927163
- Score = 848 bits (441), Expect = 0.0
- Identities = 441/441 (100%), Gaps = 0/441 (0%)
- Strand=Plus/Plus
- Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
- Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
- Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
- Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
- Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
- Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
- Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
- Query 421 CAATTTTTTCACCCGATCGGT 441
- |||||||||||||||||||||
- Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
- Score = 748 bits (389), Expect = 0.0
- Identities = 389/389 (100%), Gaps = 0/389 (0%)
- Strand=Plus/Plus
- Query 1631 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1690
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
- Query 1691 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 1750
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
- Query 1751 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 1810
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
- Query 1811 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 1870
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
- Query 1871 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 1930
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
- Query 1931 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 1990
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
- Query 1991 TTGGAAACCATATGTTGTTTTCCTCCCAC 2019
- |||||||||||||||||||||||||||||
- Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
- Score = 531 bits (276), Expect = 1e-150
- Identities = 276/276 (100%), Gaps = 0/276 (0%)
- Strand=Plus/Plus
- Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
- Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
- Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
- Query 929 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 988
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
- Query 989 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1024
- ||||||||||||||||||||||||||||||||||||
- Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
- Score = 310 bits (161), Expect = 5e-84
- Identities = 161/161 (100%), Gaps = 0/161 (0%)
- Strand=Plus/Plus
- Query 439 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 498
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
- Query 499 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 558
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
- Query 559 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 599
- |||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
- Score = 273 bits (142), Expect = 5e-73
- Identities = 142/142 (100%), Gaps = 0/142 (0%)
- Strand=Plus/Plus
- Query 1156 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1215
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
- Query 1216 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1275
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
- Query 1276 GGCTGAACTGCTACTGGGACAG 1297
- ||||||||||||||||||||||
- Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
- Score = 198 bits (103), Expect = 2e-50
- Identities = 103/103 (100%), Gaps = 0/103 (0%)
- Strand=Plus/Plus
- Query 1529 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1588
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
- Query 1589 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1631
- |||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
- Score = 189 bits (98), Expect = 1e-47
- Identities = 98/98 (100%), Gaps = 0/98 (0%)
- Strand=Plus/Plus
- Query 1347 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1406
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
- Query 1407 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1444
- ||||||||||||||||||||||||||||||||||||||
- Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
- Score = 183 bits (95), Expect = 8e-46
- Identities = 95/95 (100%), Gaps = 0/95 (0%)
- Strand=Plus/Plus
- Query 597 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 656
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
- Query 657 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 691
- |||||||||||||||||||||||||||||||||||
- Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
- Score = 166 bits (86), Expect = 1e-40
- Identities = 86/86 (100%), Gaps = 0/86 (0%)
- Strand=Plus/Plus
- Query 1443 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1502
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
- Query 1503 ACTCTCCCAATCTTCGGAGCACAGCA 1528
- ||||||||||||||||||||||||||
- Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
- Score = 162 bits (84), Expect = 2e-39
- Identities = 152/186 (82%), Gaps = 0/186 (0%)
- Strand=Plus/Plus
- Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
- |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
- Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
- Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
- || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
- Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
- Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
- ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
- Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
- Query 929 GAGTAT 934
- ||||||
- Sbjct 1684360 GAGTAT 1684365
- Score = 154 bits (80), Expect = 4e-37
- Identities = 80/80 (100%), Gaps = 0/80 (0%)
- Strand=Plus/Plus
- Query 1022 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1081
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
- Query 1082 AAGCCTCAAAATTTACTGGT 1101
- ||||||||||||||||||||
- Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
- Score = 121 bits (63), Expect = 3e-27
- Identities = 63/63 (100%), Gaps = 0/63 (0%)
- Strand=Plus/Plus
- Query 690 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 749
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
- Query 750 AGG 752
- |||
- Sbjct 4059658 AGG 4059660
- Score = 117 bits (61), Expect = 4e-26
- Identities = 61/61 (100%), Gaps = 0/61 (0%)
- Strand=Plus/Plus
- Query 1099 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1158
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
- Query 1159 A 1159
- |
- Sbjct 4060539 A 4060539
- Score = 108 bits (56), Expect = 3e-23
- Identities = 56/56 (100%), Gaps = 0/56 (0%)
- Strand=Plus/Plus
- Query 1295 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1350
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
- Score = 87.2 bits (45), Expect = 7e-17
- Identities = 71/84 (85%), Gaps = 0/84 (0%)
- Strand=Plus/Plus
- Query 1361 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1420
- ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
- Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
- Query 1421 ATCAAAGCTCACCCGTGGCACAAG 1444
- || |||||||| || ||||| |||
- Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
- Score = 64.1 bits (33), Expect = 6e-10
- Identities = 99/132 (75%), Gaps = 0/132 (0%)
- Strand=Plus/Plus
- Query 1166 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1225
- ||||| || || || || || || |||||||| || | || || ||||||||||||||
- Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
- Query 1226 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1285
- || || || ||||| | || |||||||| ||||| || || || |||||||| ||
- Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
- Query 1286 CTACTGGGACAG 1297
- || || ||||||
- Sbjct 1685453 CTTCTTGGACAG 1685464
- Score = 60.3 bits (31), Expect = 8e-09
- Identities = 49/58 (84%), Gaps = 0/58 (0%)
- Strand=Plus/Plus
- Query 1092 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1149
- |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
- Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
- Score = 44.9 bits (23), Expect = 4e-04
- Identities = 27/29 (93%), Gaps = 0/29 (0%)
- Strand=Plus/Minus
- Query 1232 GAGTACACCGCAGCAATTGATATCTGGTC 1260
- ||||| || ||||||||||||||||||||
- Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
- Lambda K H
- 1.33 0.621 1.12
- Gapped
- Lambda K H
- 1.33 0.621 1.12
- Effective search space used: 11848358857
- <b>Query=</b> orange1.1g015645m PAC:18136218 (mRNA) Citrus sinensis
- Length=2091
- Score E
- Sequences producing significant alignments: (Bits) Value
- scaffold00001 length=5927163 <a href=#scaffold00001>844</a> 0.0
- >scaffold00001<a name=scaffold00001></a> length=5927163
- Length=5927163
- Score = 844 bits (439), Expect = 0.0
- Identities = 439/439 (100%), Gaps = 0/439 (0%)
- Strand=Plus/Plus
- Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
- Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
- Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
- Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
- Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
- Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
- Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
- Query 421 CAATTTTTTCACCCGATCG 439
- |||||||||||||||||||
- Sbjct 4058880 CAATTTTTTCACCCGATCG 4058898
- Score = 748 bits (389), Expect = 0.0
- Identities = 389/389 (100%), Gaps = 0/389 (0%)
- Strand=Plus/Plus
- Query 1703 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1762
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
- Query 1763 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 1822
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
- Query 1823 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 1882
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
- Query 1883 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 1942
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
- Query 1943 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 2002
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
- Query 2003 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2062
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
- Query 2063 TTGGAAACCATATGTTGTTTTCCTCCCAC 2091
- |||||||||||||||||||||||||||||
- Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
- Score = 531 bits (276), Expect = 1e-150
- Identities = 276/276 (100%), Gaps = 0/276 (0%)
- Strand=Plus/Plus
- Query 821 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 880
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
- Query 881 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 940
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
- Query 941 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1000
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
- Query 1001 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 1060
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
- Query 1061 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1096
- ||||||||||||||||||||||||||||||||||||
- Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
- Score = 308 bits (160), Expect = 2e-83
- Identities = 160/160 (100%), Gaps = 0/160 (0%)
- Strand=Plus/Plus
- Query 512 GTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTT 571
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059172 GTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTT 4059231
- Query 572 AGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTA 631
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059232 AGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTA 4059291
- Query 632 CCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 671
- ||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059292 CCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
- Score = 273 bits (142), Expect = 5e-73
- Identities = 142/142 (100%), Gaps = 0/142 (0%)
- Strand=Plus/Plus
- Query 1228 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1287
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
- Query 1288 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1347
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
- Query 1348 GGCTGAACTGCTACTGGGACAG 1369
- ||||||||||||||||||||||
- Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
- Score = 198 bits (103), Expect = 2e-50
- Identities = 103/103 (100%), Gaps = 0/103 (0%)
- Strand=Plus/Plus
- Query 1601 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1660
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
- Query 1661 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1703
- |||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
- Score = 189 bits (98), Expect = 1e-47
- Identities = 98/98 (100%), Gaps = 0/98 (0%)
- Strand=Plus/Plus
- Query 1419 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1478
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
- Query 1479 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1516
- ||||||||||||||||||||||||||||||||||||||
- Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
- Score = 183 bits (95), Expect = 8e-46
- Identities = 95/95 (100%), Gaps = 0/95 (0%)
- Strand=Plus/Plus
- Query 669 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 728
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
- Query 729 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 763
- |||||||||||||||||||||||||||||||||||
- Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
- Score = 166 bits (86), Expect = 1e-40
- Identities = 86/86 (100%), Gaps = 0/86 (0%)
- Strand=Plus/Plus
- Query 1515 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1574
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
- Query 1575 ACTCTCCCAATCTTCGGAGCACAGCA 1600
- ||||||||||||||||||||||||||
- Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
- Score = 162 bits (84), Expect = 2e-39
- Identities = 152/186 (82%), Gaps = 0/186 (0%)
- Strand=Plus/Plus
- Query 821 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 880
- |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
- Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
- Query 881 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 940
- || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
- Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
- Query 941 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1000
- ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
- Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
- Query 1001 GAGTAT 1006
- ||||||
- Sbjct 1684360 GAGTAT 1684365
- Score = 154 bits (80), Expect = 4e-37
- Identities = 80/80 (100%), Gaps = 0/80 (0%)
- Strand=Plus/Plus
- Query 1094 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1153
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
- Query 1154 AAGCCTCAAAATTTACTGGT 1173
- ||||||||||||||||||||
- Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
- Score = 146 bits (76), Expect = 8e-35
- Identities = 76/76 (100%), Gaps = 0/76 (0%)
- Strand=Plus/Plus
- Query 439 GTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGATTTTGAGAGTAACCTG 498
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059015 GTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGATTTTGAGAGTAACCTG 4059074
- Query 499 GTTTGATGTGAATGTG 514
- ||||||||||||||||
- Sbjct 4059075 GTTTGATGTGAATGTG 4059090
- Score = 121 bits (63), Expect = 3e-27
- Identities = 63/63 (100%), Gaps = 0/63 (0%)
- Strand=Plus/Plus
- Query 762 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 821
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
- Query 822 AGG 824
- |||
- Sbjct 4059658 AGG 4059660
- Score = 117 bits (61), Expect = 4e-26
- Identities = 61/61 (100%), Gaps = 0/61 (0%)
- Strand=Plus/Plus
- Query 1171 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1230
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
- Query 1231 A 1231
- |
- Sbjct 4060539 A 4060539
- Score = 108 bits (56), Expect = 3e-23
- Identities = 56/56 (100%), Gaps = 0/56 (0%)
- Strand=Plus/Plus
- Query 1367 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1422
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
- Score = 87.2 bits (45), Expect = 7e-17
- Identities = 71/84 (85%), Gaps = 0/84 (0%)
- Strand=Plus/Plus
- Query 1433 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1492
- ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
- Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
- Query 1493 ATCAAAGCTCACCCGTGGCACAAG 1516
- || |||||||| || ||||| |||
- Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
- Score = 64.1 bits (33), Expect = 6e-10
- Identities = 99/132 (75%), Gaps = 0/132 (0%)
- Strand=Plus/Plus
- Query 1238 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1297
- ||||| || || || || || || |||||||| || | || || ||||||||||||||
- Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
- Query 1298 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1357
- || || || ||||| | || |||||||| ||||| || || || |||||||| ||
- Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
- Query 1358 CTACTGGGACAG 1369
- || || ||||||
- Sbjct 1685453 CTTCTTGGACAG 1685464
- Score = 60.3 bits (31), Expect = 9e-09
- Identities = 49/58 (84%), Gaps = 0/58 (0%)
- Strand=Plus/Plus
- Query 1164 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1221
- |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
- Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
- Score = 44.9 bits (23), Expect = 4e-04
- Identities = 27/29 (93%), Gaps = 0/29 (0%)
- Strand=Plus/Minus
- Query 1304 GAGTACACCGCAGCAATTGATATCTGGTC 1332
- ||||| || ||||||||||||||||||||
- Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
- Lambda K H
- 1.33 0.621 1.12
- Gapped
- Lambda K H
- 1.33 0.621 1.12
- Effective search space used: 11848358857
- <b>Query=</b> orange1.1g022520m PAC:18136223 (mRNA) Citrus sinensis
- Length=1655
- Score E
- Sequences producing significant alignments: (Bits) Value
- scaffold00001 length=5927163 <a href=#scaffold00001>848</a> 0.0
- >scaffold00001<a name=scaffold00001></a> length=5927163
- Length=5927163
- Score = 848 bits (441), Expect = 0.0
- Identities = 441/441 (100%), Gaps = 0/441 (0%)
- Strand=Plus/Plus
- Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
- Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
- Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
- Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
- Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
- Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
- Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
- Query 421 CAATTTTTTCACCCGATCGGT 441
- |||||||||||||||||||||
- Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
- Score = 694 bits (361), Expect = 0.0
- Identities = 361/361 (100%), Gaps = 0/361 (0%)
- Strand=Plus/Plus
- Query 1295 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGTAATT 1354
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGTAATT 4060913
- Query 1355 TTACACACTGAAATTTCTTTATCAATAAAAGCTGCCTAATGACTCTACTTAAAGCTATTT 1414
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060914 TTACACACTGAAATTTCTTTATCAATAAAAGCTGCCTAATGACTCTACTTAAAGCTATTT 4060973
- Query 1415 GAAGCTAGCGTCTGAATTTATAGGGCTGCAATTTGGCATTCTAGTGATTCCTTATTGTTG 1474
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060974 GAAGCTAGCGTCTGAATTTATAGGGCTGCAATTTGGCATTCTAGTGATTCCTTATTGTTG 4061033
- Query 1475 GGCCTCCTAAATTCTCTTTGAGAATGATGGTCAATGATAAGGTTTTTGCCTTGTAACATG 1534
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061034 GGCCTCCTAAATTCTCTTTGAGAATGATGGTCAATGATAAGGTTTTTGCCTTGTAACATG 4061093
- Query 1535 CGACAAATAGTTTGATATTGATCCAAGGAATTTCTTTTCTTTGTTGGCAACATCAAAAAG 1594
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061094 CGACAAATAGTTTGATATTGATCCAAGGAATTTCTTTTCTTTGTTGGCAACATCAAAAAG 4061153
- Query 1595 ATCCTTAGTTTGATCAAGCTGGATGCCTGTTGTGTCTTTTCTCTTATTATATTGTATTTT 1654
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061154 ATCCTTAGTTTGATCAAGCTGGATGCCTGTTGTGTCTTTTCTCTTATTATATTGTATTTT 4061213
- Query 1655 C 1655
- |
- Sbjct 4061214 C 4061214
- Score = 531 bits (276), Expect = 1e-150
- Identities = 276/276 (100%), Gaps = 0/276 (0%)
- Strand=Plus/Plus
- Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
- Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
- Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
- Query 929 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 988
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
- Query 989 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1024
- ||||||||||||||||||||||||||||||||||||
- Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
- Score = 310 bits (161), Expect = 4e-84
- Identities = 161/161 (100%), Gaps = 0/161 (0%)
- Strand=Plus/Plus
- Query 439 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 498
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
- Query 499 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 558
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
- Query 559 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 599
- |||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
- Score = 273 bits (142), Expect = 4e-73
- Identities = 142/142 (100%), Gaps = 0/142 (0%)
- Strand=Plus/Plus
- Query 1156 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1215
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
- Query 1216 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1275
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
- Query 1276 GGCTGAACTGCTACTGGGACAG 1297
- ||||||||||||||||||||||
- Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
- Score = 183 bits (95), Expect = 6e-46
- Identities = 95/95 (100%), Gaps = 0/95 (0%)
- Strand=Plus/Plus
- Query 597 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 656
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
- Query 657 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 691
- |||||||||||||||||||||||||||||||||||
- Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
- Score = 162 bits (84), Expect = 1e-39
- Identities = 152/186 (82%), Gaps = 0/186 (0%)
- Strand=Plus/Plus
- Query 749 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 808
- |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
- Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
- Query 809 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 868
- || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
- Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
- Query 869 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 928
- ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
- Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
- Query 929 GAGTAT 934
- ||||||
- Sbjct 1684360 GAGTAT 1684365
- Score = 154 bits (80), Expect = 3e-37
- Identities = 80/80 (100%), Gaps = 0/80 (0%)
- Strand=Plus/Plus
- Query 1022 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1081
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
- Query 1082 AAGCCTCAAAATTTACTGGT 1101
- ||||||||||||||||||||
- Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
- Score = 121 bits (63), Expect = 2e-27
- Identities = 63/63 (100%), Gaps = 0/63 (0%)
- Strand=Plus/Plus
- Query 690 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 749
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
- Query 750 AGG 752
- |||
- Sbjct 4059658 AGG 4059660
- Score = 117 bits (61), Expect = 3e-26
- Identities = 61/61 (100%), Gaps = 0/61 (0%)
- Strand=Plus/Plus
- Query 1099 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1158
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
- Query 1159 A 1159
- |
- Sbjct 4060539 A 4060539
- Score = 64.1 bits (33), Expect = 5e-10
- Identities = 99/132 (75%), Gaps = 0/132 (0%)
- Strand=Plus/Plus
- Query 1166 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1225
- ||||| || || || || || || |||||||| || | || || ||||||||||||||
- Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
- Query 1226 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1285
- || || || ||||| | || |||||||| ||||| || || || |||||||| ||
- Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
- Query 1286 CTACTGGGACAG 1297
- || || ||||||
- Sbjct 1685453 CTTCTTGGACAG 1685464
- Score = 60.3 bits (31), Expect = 7e-09
- Identities = 49/58 (84%), Gaps = 0/58 (0%)
- Strand=Plus/Plus
- Query 1092 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1149
- |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
- Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
- Score = 44.9 bits (23), Expect = 3e-04
- Identities = 27/29 (93%), Gaps = 0/29 (0%)
- Strand=Plus/Minus
- Query 1232 GAGTACACCGCAGCAATTGATATCTGGTC 1260
- ||||| || ||||||||||||||||||||
- Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
- Lambda K H
- 1.33 0.621 1.12
- Gapped
- Lambda K H
- 1.33 0.621 1.12
- Effective search space used: 11848358857
- <b>Query=</b> orange1.1g022799m PAC:18136224 (mRNA) Citrus sinensis
- Length=2325
- Score E
- Sequences producing significant alignments: (Bits) Value
- scaffold00001 length=5927163 <a href=#scaffold00001>1715</a> 0.0
- >scaffold00001<a name=scaffold00001></a> length=5927163
- Length=5927163
- Score = 1715 bits (892), Expect = 0.0
- Identities = 892/892 (100%), Gaps = 0/892 (0%)
- Strand=Plus/Plus
- Query 439 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 498
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
- Query 499 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 558
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
- Query 559 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGGTATATGA<font color="#000000">tttttttt</font>CTTC 618
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGGTATATGATTTTTTTTCTTC 4059350
- Query 619 TTGTTGATTTTTTGCTGCTTCGTGACAATC<font color="#000000">tttttttttt</font>ACTTACTTGAAAGCTATTAA 678
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059351 TTGTTGATTTTTTGCTGCTTCGTGACAATCTTTTTTTTTTACTTACTTGAAAGCTATTAA 4059410
- Query 679 ATTTTATGCAGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATA 738
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059411 ATTTTATGCAGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATA 4059470
- Query 739 TAATTGTCACCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG<font color="#000000">gtttacttttgttttt</font> 798
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059471 TAATTGTCACCACTATTGGGGGTAAAAATGGGCAGCCCAAACAGGTTTACTTTTGTTTTT 4059530
- Query 799 <font color="#000000">cagaaaatgctgttcagtttttatttgcttttt</font>CTTGTACTGATATGTGTGGCCTTCTTA 858
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059531 CAGAAAATGCTGTTCAGTTTTTATTTGCTTTTTCTTGTACTGATATGTGTGGCCTTCTTA 4059590
- Query 859 TTATTGTAGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTA 918
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059591 TTATTGTAGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTA 4059650
- Query 919 GTTTTCCAGGTAATCTAGCTGCCGATTGGCAATCATAGTTGGGTCTTTTAAAACTCGGGG 978
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059651 GTTTTCCAGGTAATCTAGCTGCCGATTGGCAATCATAGTTGGGTCTTTTAAAACTCGGGG 4059710
- Query 979 GTTGCATCTGATTTTATGTTCGGTCAAGGTTTGGCATTCCTCTTATTCTGCTGCCTTTGT 1038
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059711 GTTGCATCTGATTTTATGTTCGGTCAAGGTTTGGCATTCCTCTTATTCTGCTGCCTTTGT 4059770
- Query 1039 TGTGGGTTTACTTATACAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAA 1098
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059771 TGTGGGTTTACTTATACAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAA 4059830
- Query 1099 GGTTCTTCAGGACAAGAGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCA 1158
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059831 GGTTCTTCAGGACAAGAGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCA 4059890
- Query 1159 CCCAAATGTTGTGTCCCTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATA 1218
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059891 CCCAAATGTTGTGTCCCTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATA 4059950
- Query 1219 TCTTAACCTTGTTCTTGAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTA 1278
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059951 TCTTAACCTTGTTCTTGAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTA 4060010
- Query 1279 TAAAATGAGCCAAAGGATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1330
- ||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060011 TAAAATGAGCCAAAGGATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
- Score = 848 bits (441), Expect = 0.0
- Identities = 441/441 (100%), Gaps = 0/441 (0%)
- Strand=Plus/Plus
- Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
- Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
- Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
- Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
- Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
- Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
- Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
- Query 421 CAATTTTTTCACCCGATCGGT 441
- |||||||||||||||||||||
- Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
- Score = 748 bits (389), Expect = 0.0
- Identities = 389/389 (100%), Gaps = 0/389 (0%)
- Strand=Plus/Plus
- Query 1937 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1996
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
- Query 1997 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 2056
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
- Query 2057 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 2116
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
- Query 2117 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 2176
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
- Query 2177 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 2236
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
- Query 2237 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2296
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
- Query 2297 TTGGAAACCATATGTTGTTTTCCTCCCAC 2325
- |||||||||||||||||||||||||||||
- Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
- Score = 273 bits (142), Expect = 6e-73
- Identities = 142/142 (100%), Gaps = 0/142 (0%)
- Strand=Plus/Plus
- Query 1462 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1521
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
- Query 1522 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1581
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
- Query 1582 GGCTGAACTGCTACTGGGACAG 1603
- ||||||||||||||||||||||
- Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
- Score = 198 bits (103), Expect = 2e-50
- Identities = 103/103 (100%), Gaps = 0/103 (0%)
- Strand=Plus/Plus
- Query 1835 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1894
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
- Query 1895 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1937
- |||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
- Score = 189 bits (98), Expect = 2e-47
- Identities = 98/98 (100%), Gaps = 0/98 (0%)
- Strand=Plus/Plus
- Query 1653 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1712
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
- Query 1713 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1750
- ||||||||||||||||||||||||||||||||||||||
- Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
- Score = 166 bits (86), Expect = 1e-40
- Identities = 86/86 (100%), Gaps = 0/86 (0%)
- Strand=Plus/Plus
- Query 1749 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1808
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
- Query 1809 ACTCTCCCAATCTTCGGAGCACAGCA 1834
- ||||||||||||||||||||||||||
- Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
- Score = 162 bits (84), Expect = 2e-39
- Identities = 152/186 (82%), Gaps = 0/186 (0%)
- Strand=Plus/Plus
- Query 1055 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1114
- |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
- Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
- Query 1115 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1174
- || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
- Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
- Query 1175 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1234
- ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
- Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
- Query 1235 GAGTAT 1240
- ||||||
- Sbjct 1684360 GAGTAT 1684365
- Score = 154 bits (80), Expect = 4e-37
- Identities = 80/80 (100%), Gaps = 0/80 (0%)
- Strand=Plus/Plus
- Query 1328 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1387
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
- Query 1388 AAGCCTCAAAATTTACTGGT 1407
- ||||||||||||||||||||
- Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
- Score = 117 bits (61), Expect = 4e-26
- Identities = 61/61 (100%), Gaps = 0/61 (0%)
- Strand=Plus/Plus
- Query 1405 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1464
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
- Query 1465 A 1465
- |
- Sbjct 4060539 A 4060539
- Score = 108 bits (56), Expect = 3e-23
- Identities = 56/56 (100%), Gaps = 0/56 (0%)
- Strand=Plus/Plus
- Query 1601 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1656
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
- Score = 87.2 bits (45), Expect = 8e-17
- Identities = 71/84 (85%), Gaps = 0/84 (0%)
- Strand=Plus/Plus
- Query 1667 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1726
- ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
- Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
- Query 1727 ATCAAAGCTCACCCGTGGCACAAG 1750
- || |||||||| || ||||| |||
- Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
- Score = 64.1 bits (33), Expect = 7e-10
- Identities = 99/132 (75%), Gaps = 0/132 (0%)
- Strand=Plus/Plus
- Query 1472 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1531
- ||||| || || || || || || |||||||| || | || || ||||||||||||||
- Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
- Query 1532 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1591
- || || || ||||| | || |||||||| ||||| || || || |||||||| ||
- Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
- Query 1592 CTACTGGGACAG 1603
- || || ||||||
- Sbjct 1685453 CTTCTTGGACAG 1685464
- Score = 60.3 bits (31), Expect = 1e-08
- Identities = 49/58 (84%), Gaps = 0/58 (0%)
- Strand=Plus/Plus
- Query 1398 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1455
- |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
- Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
- Score = 44.9 bits (23), Expect = 4e-04
- Identities = 27/29 (93%), Gaps = 0/29 (0%)
- Strand=Plus/Minus
- Query 1538 GAGTACACCGCAGCAATTGATATCTGGTC 1566
- ||||| || ||||||||||||||||||||
- Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
- Lambda K H
- 1.33 0.621 1.12
- Gapped
- Lambda K H
- 1.33 0.621 1.12
- Effective search space used: 11848358857
- <b>Query=</b> orange1.1g022797m PAC:18136225 (mRNA) Citrus sinensis
- Length=2221
- Score E
- Sequences producing significant alignments: (Bits) Value
- scaffold00001 length=5927163 <a href=#scaffold00001>1237</a> 0.0
- >scaffold00001<a name=scaffold00001></a> length=5927163
- Length=5927163
- Score = 1237 bits (643), Expect = 0.0
- Identities = 643/643 (100%), Gaps = 0/643 (0%)
- Strand=Plus/Plus
- Query 597 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 656
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
- Query 657 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG<font color="#000000">gtttacttttgtttttcagaaaatg</font> 716
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAGGTTTACTTTTGTTTTTCAGAAAATG 4059539
- Query 717 <font color="#000000">ctgttcagtttttatttgcttttt</font>CTTGTACTGATATGTGTGGCCTTCTTATTATTGTAG 776
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059540 CTGTTCAGTTTTTATTTGCTTTTTCTTGTACTGATATGTGTGGCCTTCTTATTATTGTAG 4059599
- Query 777 ACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCCAG 836
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059600 ACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCCAG 4059659
- Query 837 GTAATCTAGCTGCCGATTGGCAATCATAGTTGGGTCTTTTAAAACTCGGGGGTTGCATCT 896
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059660 GTAATCTAGCTGCCGATTGGCAATCATAGTTGGGTCTTTTAAAACTCGGGGGTTGCATCT 4059719
- Query 897 GATTTTATGTTCGGTCAAGGTTTGGCATTCCTCTTATTCTGCTGCCTTTGTTGTGGGTTT 956
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059720 GATTTTATGTTCGGTCAAGGTTTGGCATTCCTCTTATTCTGCTGCCTTTGTTGTGGGTTT 4059779
- Query 957 ACTTATACAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCA 1016
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059780 ACTTATACAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCA 4059839
- Query 1017 GGACAAGAGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGT 1076
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059840 GGACAAGAGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGT 4059899
- Query 1077 TGTGTCCCTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCT 1136
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059900 TGTGTCCCTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCT 4059959
- Query 1137 TGTTCTTGAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAG 1196
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059960 TGTTCTTGAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAG 4060019
- Query 1197 CCAAAGGATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1239
- |||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060020 CCAAAGGATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
- Score = 848 bits (441), Expect = 0.0
- Identities = 441/441 (100%), Gaps = 0/441 (0%)
- Strand=Plus/Plus
- Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
- Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
- Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
- Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
- Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
- Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
- Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
- Query 421 CAATTTTTTCACCCGATCGGT 441
- |||||||||||||||||||||
- Sbjct 4058880 CAATTTTTTCACCCGATCGGT 4058900
- Score = 721 bits (375), Expect = 0.0
- Identities = 375/375 (100%), Gaps = 0/375 (0%)
- Strand=Plus/Plus
- Query 1846 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 1905
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
- Query 1906 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 1965
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
- Query 1966 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 2025
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
- Query 2026 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 2085
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
- Query 2086 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 2145
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
- Query 2146 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2205
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
- Query 2206 TTGGAAACCATATGT 2220
- |||||||||||||||
- Sbjct 4062182 TTGGAAACCATATGT 4062196
- Score = 310 bits (161), Expect = 5e-84
- Identities = 161/161 (100%), Gaps = 0/161 (0%)
- Strand=Plus/Plus
- Query 439 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 498
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059171 GGTGAGTTATTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTT 4059230
- Query 499 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 558
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059231 TAGAATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTT 4059290
- Query 559 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 599
- |||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059291 ACCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAGG 4059331
- Score = 273 bits (142), Expect = 5e-73
- Identities = 142/142 (100%), Gaps = 0/142 (0%)
- Strand=Plus/Plus
- Query 1371 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1430
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
- Query 1431 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1490
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
- Query 1491 GGCTGAACTGCTACTGGGACAG 1512
- ||||||||||||||||||||||
- Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
- Score = 198 bits (103), Expect = 2e-50
- Identities = 103/103 (100%), Gaps = 0/103 (0%)
- Strand=Plus/Plus
- Query 1744 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1803
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
- Query 1804 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1846
- |||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
- Score = 189 bits (98), Expect = 1e-47
- Identities = 98/98 (100%), Gaps = 0/98 (0%)
- Strand=Plus/Plus
- Query 1562 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1621
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
- Query 1622 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1659
- ||||||||||||||||||||||||||||||||||||||
- Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
- Score = 166 bits (86), Expect = 1e-40
- Identities = 86/86 (100%), Gaps = 0/86 (0%)
- Strand=Plus/Plus
- Query 1658 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1717
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
- Query 1718 ACTCTCCCAATCTTCGGAGCACAGCA 1743
- ||||||||||||||||||||||||||
- Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
- Score = 162 bits (84), Expect = 2e-39
- Identities = 152/186 (82%), Gaps = 0/186 (0%)
- Strand=Plus/Plus
- Query 964 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1023
- |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
- Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
- Query 1024 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1083
- || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
- Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
- Query 1084 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1143
- ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
- Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
- Query 1144 GAGTAT 1149
- ||||||
- Sbjct 1684360 GAGTAT 1684365
- Score = 154 bits (80), Expect = 4e-37
- Identities = 80/80 (100%), Gaps = 0/80 (0%)
- Strand=Plus/Plus
- Query 1237 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1296
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
- Query 1297 AAGCCTCAAAATTTACTGGT 1316
- ||||||||||||||||||||
- Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
- Score = 118 bits (61), Expect = 4e-26
- Identities = 61/61 (100%), Gaps = 0/61 (0%)
- Strand=Plus/Plus
- Query 1314 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1373
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
- Query 1374 A 1374
- |
- Sbjct 4060539 A 4060539
- Score = 108 bits (56), Expect = 3e-23
- Identities = 56/56 (100%), Gaps = 0/56 (0%)
- Strand=Plus/Plus
- Query 1510 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1565
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
- Score = 87.2 bits (45), Expect = 7e-17
- Identities = 71/84 (85%), Gaps = 0/84 (0%)
- Strand=Plus/Plus
- Query 1576 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1635
- ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
- Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
- Query 1636 ATCAAAGCTCACCCGTGGCACAAG 1659
- || |||||||| || ||||| |||
- Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
- Score = 64.2 bits (33), Expect = 6e-10
- Identities = 99/132 (75%), Gaps = 0/132 (0%)
- Strand=Plus/Plus
- Query 1381 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1440
- ||||| || || || || || || |||||||| || | || || ||||||||||||||
- Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
- Query 1441 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1500
- || || || ||||| | || |||||||| ||||| || || || |||||||| ||
- Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
- Query 1501 CTACTGGGACAG 1512
- || || ||||||
- Sbjct 1685453 CTTCTTGGACAG 1685464
- Score = 60.3 bits (31), Expect = 9e-09
- Identities = 49/58 (84%), Gaps = 0/58 (0%)
- Strand=Plus/Plus
- Query 1307 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1364
- |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
- Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
- Score = 44.9 bits (23), Expect = 4e-04
- Identities = 27/29 (93%), Gaps = 0/29 (0%)
- Strand=Plus/Minus
- Query 1447 GAGTACACCGCAGCAATTGATATCTGGTC 1475
- ||||| || ||||||||||||||||||||
- Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
- Lambda K H
- 1.33 0.621 1.12
- Gapped
- Lambda K H
- 1.33 0.621 1.12
- Effective search space used: 11848358857
- <b>Query=</b> orange1.1g017341m PAC:18136221 (mRNA) Citrus sinensis
- Length=2397
- Score E
- Sequences producing significant alignments: (Bits) Value
- scaffold00001 length=5927163 <a href=#scaffold00001>2029</a> 0.0
- >scaffold00001<a name=scaffold00001></a> length=5927163
- Length=5927163
- Score = 2029 bits (1055), Expect = 0.0
- Identities = 1055/1055 (100%), Gaps = 0/1055 (0%)
- Strand=Plus/Plus
- Query 1 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 60
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058460 GCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATGATGAAAGGGGAGGA 4058519
- Query 61 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 120
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058520 GGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAAATGAAGGACATAAA 4058579
- Query 121 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 180
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058580 CAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTGACTCACTCACCGCC 4058639
- Query 181 TGTGT<font color="#000000">caccaccaccaccacca</font>ATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 240
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058640 TGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGCCACCATTCGCTCAA 4058699
- Query 241 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAA<font color="#000000">ctcctctcccttctctctctctctct</font> 300
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058700 TCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTTCTCTCTCTCTCTCT 4058759
- Query 301 <font color="#000000">ctctctct</font>TTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 360
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058760 CTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCCATTTATCTGA 4058819
- Query 361 AAGCCGAACAATTTACC<font color="#000000">tttttaattttttcttttt</font>AGTTATTGCGCTTATGGATCTACC 420
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058820 AAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTATGGATCTACC 4058879
- Query 421 CA<font color="#000000">attttttcacccgatcggtaattttcacattgtttctattacttttattttcttttcc</font> 480
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058880 CAATTTTTTCACCCGATCGGTAATTTTCACATTGTTTCTATTACTTTTATTTTCTTTTCC 4058939
- Query 481 <font color="#000000">attttattattattattattatgtgcattttta</font>GATCTTTGCGGGTAAATAGATTGAAAC 540
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4058940 ATTTTATTATTATTATTATTATGTGCATTTTTAGATCTTTGCGGGTAAATAGATTGAAAC 4058999
- Query 541 TGTTAGCTTTGTAAAGTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGAT 600
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059000 TGTTAGCTTTGTAAAGTAGGTGCACATTTTTTCCAGTGCGGTGTGAACTTCCATCCAGAT 4059059
- Query 601 TTTGAGAGTAACCTGGTTTGATGTGAATGTGGATACCATTTACTATTTACTGAATTTTCT 660
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059060 TTTGAGAGTAACCTGGTTTGATGTGAATGTGGATACCATTTACTATTTACTGAATTTTCT 4059119
- Query 661 GATGTGTCTTGTATTGATTTGCTTAAACCGCTGATTGTTACTGCTTCTGCAGGTGAGTTA 720
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059120 GATGTGTCTTGTATTGATTTGCTTAAACCGCTGATTGTTACTGCTTCTGCAGGTGAGTTA 4059179
- Query 721 TTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTTAGAATGGC 780
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059180 TTAATTAGTGAAGGTGAATTTGGAAGGGGGTGGAAGGTTTTGTTATTTCTTTAGAATGGC 4059239
- Query 781 TTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTACCCGAGGA 840
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059240 TTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTACCCGAGGA 4059299
- Query 841 GATGAATGACATGAAAATTAGGGATGACAAGGTATATGA<font color="#000000">tttttttt</font>CTTCTTGTTGATT 900
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059300 GATGAATGACATGAAAATTAGGGATGACAAGGTATATGATTTTTTTTCTTCTTGTTGATT 4059359
- Query 901 TTTTGCTGCTTCGTGACAATC<font color="#000000">tttttttttt</font>ACTTACTTGAAAGCTATTAAATTTTATGC 960
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059360 TTTTGCTGCTTCGTGACAATCTTTTTTTTTTACTTACTTGAAAGCTATTAAATTTTATGC 4059419
- Query 961 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 1020
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059420 AGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAATTGTCA 4059479
- Query 1021 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 1055
- |||||||||||||||||||||||||||||||||||
- Sbjct 4059480 CCACTATTGGGGGTAAAAATGGGCAGCCCAAACAG 4059514
- Score = 748 bits (389), Expect = 0.0
- Identities = 389/389 (100%), Gaps = 0/389 (0%)
- Strand=Plus/Plus
- Query 1995 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 2054
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061822 GAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAA 4061881
- Query 2055 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 2114
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061882 CAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGTTGAAGCCTGCTCCTTGCAG 4061941
- Query 2115 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 2174
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061942 GTTGCAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGTAGCTAGTGGCCTGTATCAA 4062001
- Query 2175 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 2234
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062002 GTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCTTAGTTCATTTGTTCCGTTT 4062061
- Query 2235 ATTGA<font color="#000000">ttttttt</font>AGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 2294
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062062 ATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTTGTAGAAAGCAGATGGAGAA 4062121
- Query 2295 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 2354
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4062122 GAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCTGACCAGATTGTAATGTCAA 4062181
- Query 2355 TTGGAAACCATATGTTGTTTTCCTCCCAC 2383
- |||||||||||||||||||||||||||||
- Sbjct 4062182 TTGGAAACCATATGTTGTTTTCCTCCCAC 4062210
- Score = 531 bits (276), Expect = 2e-150
- Identities = 276/276 (100%), Gaps = 0/276 (0%)
- Strand=Plus/Plus
- Query 1113 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1172
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059787 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 4059846
- Query 1173 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1232
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059847 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 4059906
- Query 1233 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1292
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059907 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 4059966
- Query 1293 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 1352
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059967 GAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGCCAAAGG 4060026
- Query 1353 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 1388
- ||||||||||||||||||||||||||||||||||||
- Sbjct 4060027 ATGCCATTGATTTACGTCAAACTTTACTTTTACCAG 4060062
- Score = 273 bits (142), Expect = 6e-73
- Identities = 142/142 (100%), Gaps = 0/142 (0%)
- Strand=Plus/Plus
- Query 1520 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 1579
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060624 GGTAAAGGGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACT 4060683
- Query 1580 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 1639
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060684 TATATTTGGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTT 4060743
- Query 1640 GGCTGAACTGCTACTGGGACAG 1661
- ||||||||||||||||||||||
- Sbjct 4060744 GGCTGAACTGCTACTGGGACAG 4060765
- Score = 198 bits (103), Expect = 2e-50
- Identities = 103/103 (100%), Gaps = 0/103 (0%)
- Strand=Plus/Plus
- Query 1893 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 1952
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061617 TTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGACTCCCA 4061676
- Query 1953 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 1995
- |||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061677 AATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATG 4061719
- Score = 189 bits (98), Expect = 2e-47
- Identities = 98/98 (100%), Gaps = 0/98 (0%)
- Strand=Plus/Plus
- Query 1711 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 1770
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061248 AGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGT 4061307
- Query 1771 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 1808
- ||||||||||||||||||||||||||||||||||||||
- Sbjct 4061308 TTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAG 4061345
- Score = 166 bits (86), Expect = 1e-40
- Identities = 86/86 (100%), Gaps = 0/86 (0%)
- Strand=Plus/Plus
- Query 1807 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 1866
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4061415 AGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGT 4061474
- Query 1867 ACTCTCCCAATCTTCGGAGCACAGCA 1892
- ||||||||||||||||||||||||||
- Sbjct 4061475 ACTCTCCCAATCTTCGGAGCACAGCA 4061500
- Score = 162 bits (84), Expect = 2e-39
- Identities = 152/186 (82%), Gaps = 0/186 (0%)
- Strand=Plus/Plus
- Query 1113 CAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAG 1172
- |||||||||||| | || || || || ||||||||||||||||||| || ||||| |||
- Sbjct 1684180 CAGGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAG 1684239
- Query 1173 AGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCC 1232
- || |||||||| |||| || |||| |||||| | || |||| || |||||||| ||
- Sbjct 1684240 AGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTCT 1684299
- Query 1233 CTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTT 1292
- ||||| || |||||||||||||| ||||| || |||||||| |||||||||||||| |
- Sbjct 1684300 CTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTATCTTAACCTTGTCTTG 1684359
- Query 1293 GAGTAT 1298
- ||||||
- Sbjct 1684360 GAGTAT 1684365
- Score = 154 bits (80), Expect = 4e-37
- Identities = 80/80 (100%), Gaps = 0/80 (0%)
- Strand=Plus/Plus
- Query 1386 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 1445
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060282 CAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCACAGGGACATA 4060341
- Query 1446 AAGCCTCAAAATTTACTGGT 1465
- ||||||||||||||||||||
- Sbjct 4060342 AAGCCTCAAAATTTACTGGT 4060361
- Score = 121 bits (63), Expect = 3e-27
- Identities = 63/63 (100%), Gaps = 0/63 (0%)
- Strand=Plus/Plus
- Query 1054 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 1113
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4059598 AGACAATAAGCTACATGGCTGAACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCC 4059657
- Query 1114 AGG 1116
- |||
- Sbjct 4059658 AGG 4059660
- Score = 117 bits (61), Expect = 4e-26
- Identities = 61/61 (100%), Gaps = 0/61 (0%)
- Strand=Plus/Plus
- Query 1463 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 1522
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060479 GGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGT 4060538
- Query 1523 A 1523
- |
- Sbjct 4060539 A 4060539
- Score = 108 bits (56), Expect = 3e-23
- Identities = 56/56 (100%), Gaps = 0/56 (0%)
- Strand=Plus/Plus
- Query 1659 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 1714
- ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
- Sbjct 4060854 CAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGT 4060909
- Score = 87.2 bits (45), Expect = 8e-17
- Identities = 71/84 (85%), Gaps = 0/84 (0%)
- Strand=Plus/Plus
- Query 1725 CCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAA 1784
- ||||| || |||||||| ||||||||||||||||| ||||| || ||||| || || |||
- Sbjct 1686050 CCAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAA 1686109
- Query 1785 ATCAAAGCTCACCCGTGGCACAAG 1808
- || |||||||| || ||||| |||
- Sbjct 1686110 ATTAAAGCTCATCCATGGCATAAG 1686133
- Score = 64.1 bits (33), Expect = 7e-10
- Identities = 99/132 (75%), Gaps = 0/132 (0%)
- Strand=Plus/Plus
- Query 1530 GAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGT 1589
- ||||| || || || || || || |||||||| || | || || ||||||||||||||
- Sbjct 1685333 GAACCCAACATATCGTATATCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGGG 1685392
- Query 1590 GCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTG 1649
- || || || ||||| | || |||||||| ||||| || || || |||||||| ||
- Sbjct 1685393 GCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGAGCTT 1685452
- Query 1650 CTACTGGGACAG 1661
- || || ||||||
- Sbjct 1685453 CTTCTTGGACAG 1685464
- Score = 60.3 bits (31), Expect = 1e-08
- Identities = 49/58 (84%), Gaps = 0/58 (0%)
- Strand=Plus/Plus
- Query 1456 ATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAA 1513
- |||| | ||||||||| ||||| |||||| | || | ||||||||||||||||||||
- Sbjct 1685160 ATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGGAAGTGCAAA 1685217
- Score = 44.9 bits (23), Expect = 4e-04
- Identities = 27/29 (93%), Gaps = 0/29 (0%)
- Strand=Plus/Minus
- Query 1596 GAGTACACCGCAGCAATTGATATCTGGTC 1624
- ||||| || ||||||||||||||||||||
- Sbjct 2213247 GAGTATACAGCAGCAATTGATATCTGGTC 2213219
- Lambda K H
- 1.33 0.621 1.12
- Gapped
- Lambda K H
- 1.33 0.621 1.12
- Effective search space used: 11848358857
- Database: Citrus_sinensis-scaffold00001.fasta
- Posted date: Jun 10, 2018 8:23 PM
- Number of letters in database: 5,927,163
- Number of sequences in database: 1
- Matrix: blastn matrix 1 -2
- Gap Penalties: Existence: 5, Extension: 2
- </PRE>
- </BODY>
- </HTML>
|