 Lacey-Anne Sanderson
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4a8bbd8e6b
Merge pull request #61 from tripal/phpunit-action
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vor 4 Jahren |
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Lacey-Anne Sanderson
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4521b1d8a2
add badges and citation to readme.
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vor 4 Jahren |
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Lacey-Anne Sanderson
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6c7fd8233c
Delete .travis.yml
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vor 4 Jahren |
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Lacey-Anne Sanderson
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0af9f5dc66
Make sure test property keys are unique.
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vor 4 Jahren |
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Lacey-Anne Sanderson
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edcf263737
don't copy imaginary files.
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vor 4 Jahren |
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Lacey-Anne Sanderson
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24bc507620
move into drupal root to enable.
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vor 4 Jahren |
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Lacey-Anne Sanderson
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125b404033
add tripal_jbrowse directory.
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vor 4 Jahren |
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Lacey-Anne Sanderson
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83b5480f54
fix indenting.
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vor 4 Jahren |
 Lacey Sanderson
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222c578e65
Create phpunit action in the correct place.
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vor 4 Jahren |
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Lacey-Anne Sanderson
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b2ffd7f0e8
Create phpunit test github action.
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vor 4 Jahren |
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Lacey-Anne Sanderson
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0b5d12e77c
Merge pull request #60 from dsenalik/20201015-gff3
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vor 4 Jahren |
 dsenalik
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663c751749
Add support for gff3 file extension
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vor 4 Jahren |
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Lacey-Anne Sanderson
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599a3d77c5
Bug Fix: Path definition now includes the id.
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vor 4 Jahren |
 Yichao Shen
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d41e731d1c
Merge pull request #59 from tripal/page-permissions
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vor 4 Jahren |
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Lacey Sanderson
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41c4b4c57e
Fix hook name.
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vor 4 Jahren |
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Lacey Sanderson
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e57f041fda
Add permission to view excluded embedded pages.
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vor 4 Jahren |
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Lacey-Anne Sanderson
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30be1232d9
Merge pull request #58 from tripal/46-alignments
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vor 4 Jahren |
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Jiu9Shen
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95e9353c39
fix issue of vcf files not copied to right sub-dir
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vor 4 Jahren |
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Jiu9Shen
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50ceb5a1b5
fix issue of json not configered properly
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vor 4 Jahren |
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Jiu9Shen
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76e44d3840
include csi as one index format for alignment track, also edit json
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vor 4 Jahren |
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Jiu9Shen
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1e86318ea0
remove dpm testing lines
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vor 4 Jahren |
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Jiu9Shen
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593e936771
fix issue realted to creating symlink, also make it selected as default
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vor 4 Jahren |
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Jiu9Shen
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4f445c08c3
fix issue of alignment track cannot display
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vor 4 Jahren |
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Lacey Sanderson
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c5045a0ccc
Ensure bam/cram submits and job adds it to JBrowse.
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vor 4 Jahren |
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Lacey Sanderson
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dd009f397d
Ensure directory/index are shown for bam/cram.
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vor 4 Jahren |
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Lacey-Anne Sanderson
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fa102c744b
Merge pull request #57 from Jiu9Shen/46-alignment_tracks
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vor 4 Jahren |
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Jiu9Shen
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b0d5e7eeb8
change file validate/upload of folder to a function
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vor 4 Jahren |
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Jiu9Shen
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a60cf92b85
include new file type and track type in track file.
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vor 4 Jahren |
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Jiu9Shen
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2a460cd39c
include alignment tracks bam and cram in commands
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vor 4 Jahren |
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Lacey-Anne Sanderson
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36481dfe83
Merge pull request #55 from tripal/issue51
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vor 5 Jahren |
