language: php # Add php version so composer doesn't complain php: - 7.1 services: - docker env: - DRUPAL_ROOT=/var/www/html JBROWSE_ROOT=/var/www/html/jbrowse before_script: - docker pull statonlab/tripal3 script: - docker run -it -d --rm --name tripal -v "$(pwd)":/modules/tripal_jbrowse statonlab/tripal3 - sleep 30 # We pause here so postgres and apache complete booting up ## Install JBrowse - docker exec -it tripal bash -c 'sudo yum -y groupinstall "Development Tools"' - docker exec -it tripal bash -c 'sudo yum -y install zlib-devel perl-ExtUtils-MakeMaker' - docker exec -it tripal bash -c 'curl -L -O https://github.com/GMOD/jbrowse/releases/download/1.16.6-release/JBrowse-1.16.6.zip' - docker exec -it tripal bash -c 'unzip JBrowse-1.16.6.zip && sudo mv JBrowse-1.16.6 /var/www/html/jbrowse && cd /var/www/html && sudo chown `whoami` jbrowse' - docker exec -it tripal bash -c 'cd /var/www/html/jbrowse && ./setup.sh' ## Install tripal_jbrowse package. - docker exec -it tripal drush pm-enable -y tripal_jbrowse tripal_jbrowse_mgmt ## Run Tests. - docker exec -it tripal bash -c "cd /modules/tripal_jbrowse && composer install && DRUPAL_ROOT=/var/www/html ./vendor/bin/phpunit"