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README.md

Tripal JBrowse Integration

This package of modules integrates GMOD JBrowse into your Tripal site providing

  • Tripal page integration via Tripal JBrowse Page and
  • a user interface for JBrowse instance creation and management via Tripal JBrowse Management.

This powerful combination allows you to provide seamless genome browsing to your users in an administrator-friendly manner.

Quick Start

  1. Download and install JBrowse in a web accessible location (e.g. DRUPAL_ROOT/tools/jbrowse).
  2. Download and unpack this package in your Drupal modules directory (i.e sites/all/modules).
  3. Enable "Tripal JBrowse Management" submodule through http://[your site]/admin/modules.
  4. Create a JBrowse instance for your species of interest using the Admin > Tripal > Tripal JBrowse Management user interface.
  5. Enable "Tripal-JBrowse Page Integration" submodule through http://[your site]/admin/modules.
  6. Embedded versions will be created for all your instances created in step 4.

Documentation

Please visit our online documentation to learn more about installation, usage and features.

License & Acknowledgements

This module is open-source and licensed under GPLv3. Read full license.

Authors:

Copyright 2018 University of Saskatchewan and University of Tennessee Knoxville.