tripal_jbrowse/README.md

Tripal JBrowse Integration

This package of modules integrates GMOD JBrowse into your Tripal site providing

• Tripal page integration via Tripal JBrowse and
• a user interface for JBrowse instance creation and management via Tripal JBrowse Management.

This powerful combination allows you to provide seamless genome browsing to your users in an administrator-friendly manner.

Quick Start

1. Download and unpack this package in your Drupal modules directory (i.e sites/all/modules).
2. Enable "Tripal JBrowse Management" submodule through http://[your site]/admin/modules.
3. Create a JBrowse instance for your species of interest using the Admin > Tripal > Tripal JBrowse Management user interface.
4. Enable "Tripal JBrowse Integration" submodule through http://[your site]/admin/modules.
5. Create an embeded JBrowse page at Add Content > JBrowse Instance by supplying the information for the instance created in step 3.

Documentation

Please visit our online documentation to learn more about installation, usage and features.

License & Acknowledgements

This module is open-source and licensed under GPLv3. Read full license.

Authors:

• Lacey-Anne Sanderson (@laceysanderson)
• Abdullah Almsaeed (@almasaeed2010)
• Joe West (@jwest60)
• Other contributors (https://github.com/tripal/tripal_jbrowse/graphs/contributors)

Copyright 2018 University of Saskatchewan and University of Tennessee Knoxville.